RNA–Protein interactions for RNA: ENST00000493664.5

ZIC4-215, Transcript of Zic family member 4, humanhuman

TSL 2

Gene ZIC4, Length 2,965 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC4-215ENST00000493664 ANO6Q4KMQ2 910 aa16.68■□□□□ 0.26
ZIC4-215ENST00000493664 RNF20Q5VTR2 975 aa16.68■□□□□ 0.26
ZIC4-215ENST00000493664 CCDC129Q6ZRS4 1044 aa16.68■□□□□ 0.26
ZIC4-215ENST00000493664 KCNH5Q8NCM2 988 aa16.68■□□□□ 0.26
ZIC4-215ENST00000493664 LMO7Q8WWI1 1683 aa16.68■□□□□ 0.26
ZIC4-215ENST00000493664 SEC62Q99442 399 aaKnown RBP16.68■□□□□ 0.26
ZIC4-215ENST00000493664 LRRC2Q9BYS8 371 aa16.68■□□□□ 0.26
ZIC4-215ENST00000493664 PRDM10Q9NQV6 1147 aa16.68■□□□□ 0.26
ZIC4-215ENST00000493664 USP54Q70EL1 1684 aa16.68■□□□□ 0.26
ZIC4-215ENST00000493664 DDX21Q9NR30 783 aaKnown RBP eCLIP16.68■□□□□ 0.26
ZIC4-215ENST00000493664 DDX58O95786 925 aaKnown RBP16.67■□□□□ 0.26
ZIC4-215ENST00000493664 PDCP20941 246 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 HMGN5P82970 282 aaKnown RBP16.67■□□□□ 0.26
ZIC4-215ENST00000493664 LEO1Q8WVC0 666 aaPredicted RBP16.67■□□□□ 0.26
ZIC4-215ENST00000493664 ORAI2Q96SN7 254 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 MYD88Q99836 296 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 COL15A1P39059 1388 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 MED23Q9ULK4 1368 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 NR1I2O75469 434 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 TAF5LO75529 589 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 FOSBP53539 338 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 CEBPZQ03701 1054 aaKnown RBP16.67■□□□□ 0.26
ZIC4-215ENST00000493664 LRMPQ12912 555 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 NRBP1Q9UHY1 535 aa16.67■□□□□ 0.26
ZIC4-215ENST00000493664 HEG1Q9ULI3 1381 aa16.66■□□□□ 0.26
ZIC4-215ENST00000493664 PPFIA3O75145 1194 aa16.66■□□□□ 0.26
ZIC4-215ENST00000493664 MTERF4Q7Z6M4 381 aaKnown RBP16.66■□□□□ 0.26
ZIC4-215ENST00000493664 CBX8Q9HC52 389 aa16.66■□□□□ 0.26
ZIC4-215ENST00000493664 HDAC5Q9UQL6 1122 aa16.66■□□□□ 0.26
ZIC4-215ENST00000493664 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
ZIC4-215ENST00000493664 XAGE3Q8WTP9 111 aa16.66■□□□□ 0.26
ZIC4-215ENST00000493664 PGBD1Q96JS3 809 aa16.66■□□□□ 0.26
ZIC4-215ENST00000493664 DBNLQ9UJU6 430 aaKnown RBP16.66■□□□□ 0.26
ZIC4-215ENST00000493664 ANKRD1Q15327 319 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 COPS6Q7L5N1 327 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 CCDC186Q7Z3E2 898 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 ARHGEF25Q86VW2 580 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 DRC7Q8IY82 874 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 BICD2Q8TD16 824 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 DNAJC2Q99543 621 aaKnown RBP16.65■□□□□ 0.26
ZIC4-215ENST00000493664 UTYO14607 1347 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 ELP1O95163 1332 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 NEURL1BA8MQ27 555 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 SCAND2PQ9GZW5 306 aaPredicted RBP16.65■□□□□ 0.26
ZIC4-215ENST00000493664 SNRKQ9NRH2 765 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 HSP90B1P14625 803 aaKnown RBP16.65■□□□□ 0.26
ZIC4-215ENST00000493664 SLFNL1Q499Z3 407 aa16.65■□□□□ 0.26
ZIC4-215ENST00000493664 CHD2O14647 1828 aaKnown RBP16.64■□□□□ 0.26
ZIC4-215ENST00000493664 RIOK3O14730 519 aaKnown RBP16.64■□□□□ 0.25
ZIC4-215ENST00000493664 TFCP2Q12800 502 aa16.64■□□□□ 0.25
ZIC4-215ENST00000493664 GCKRQ14397 625 aa16.64■□□□□ 0.25
ZIC4-215ENST00000493664 BRF1Q92994 677 aa16.64■□□□□ 0.25
ZIC4-215ENST00000493664 DNAJC25Q9H1X3 360 aa16.64■□□□□ 0.25
ZIC4-215ENST00000493664 BCL2L12Q9HB09 334 aa16.64■□□□□ 0.25
ZIC4-215ENST00000493664 GOLGA6L6A8MZA4 724 aa16.64■□□□□ 0.25
ZIC4-215ENST00000493664 GTF2F1P35269 517 aaKnown RBP eCLIP16.64■□□□□ 0.25
ZIC4-215ENST00000493664 Q6ZUG5 572 aa16.64■□□□□ 0.25
ZIC4-215ENST00000493664 TRIM5Q9C035 493 aa16.64■□□□□ 0.25
ZIC4-215ENST00000493664 PRDM4Q9UKN5 801 aa16.64■□□□□ 0.25
ZIC4-215ENST00000493664 NEXNQ0ZGT2 675 aa16.63■□□□□ 0.25
ZIC4-215ENST00000493664 NPHP3Q7Z494 1330 aa16.63■□□□□ 0.25
ZIC4-215ENST00000493664 ZNF790Q6PG37 636 aa16.63■□□□□ 0.25
ZIC4-215ENST00000493664 DDX46Q7L014 1031 aaKnown RBP16.63■□□□□ 0.25
ZIC4-215ENST00000493664 NFATC2IPQ8NCF5 419 aa16.63■□□□□ 0.25
ZIC4-215ENST00000493664 NEK1Q96PY6 1258 aa16.63■□□□□ 0.25
ZIC4-215ENST00000493664 CCDC94Q9BW85 323 aaPredicted RBP16.63■□□□□ 0.25
ZIC4-215ENST00000493664 GTF3C6Q969F1 213 aa16.62■□□□□ 0.25
ZIC4-215ENST00000493664 FTOQ9C0B1 505 aaKnown RBP eCLIP16.62■□□□□ 0.25
ZIC4-215ENST00000493664 ATP5J2-PTCD1G3V325 749 aa16.62■□□□□ 0.25
ZIC4-215ENST00000493664 PTCD1O75127 700 aaKnown RBP16.62■□□□□ 0.25
ZIC4-215ENST00000493664 A0A087WWV3 80 aa16.62■□□□□ 0.25
ZIC4-215ENST00000493664 H3BQV1 296 aa16.62■□□□□ 0.25
ZIC4-215ENST00000493664 CYP21A2P08686 494 aa16.62■□□□□ 0.25
ZIC4-215ENST00000493664 ZC3H6P61129 1189 aaKnown RBP16.62■□□□□ 0.25
ZIC4-215ENST00000493664 IFFO2Q5TF58 517 aa16.62■□□□□ 0.25
ZIC4-215ENST00000493664 DBNDD2Q9BQY9 259 aa16.62■□□□□ 0.25
ZIC4-215ENST00000493664 CLSTN2Q9H4D0 955 aa16.62■□□□□ 0.25
ZIC4-215ENST00000493664 HMG20BQ9P0W2 317 aa16.62■□□□□ 0.25
ZIC4-215ENST00000493664 KDM4FA0A1W2PPD8 638 aa16.61■□□□□ 0.25
ZIC4-215ENST00000493664 ZNF165P49910 485 aa16.61■□□□□ 0.25
ZIC4-215ENST00000493664 TNNI3KQ59H18 835 aa16.61■□□□□ 0.25
ZIC4-215ENST00000493664 UBE3BQ7Z3V4 1068 aa16.61■□□□□ 0.25
ZIC4-215ENST00000493664 FPGT-TNNI3KV9GXZ4 949 aa16.61■□□□□ 0.25
ZIC4-215ENST00000493664 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
ZIC4-215ENST00000493664 DDX19AQ9NUU7 478 aaKnown RBP16.61■□□□□ 0.25
ZIC4-215ENST00000493664 USP16Q9Y5T5 823 aa16.61■□□□□ 0.25
ZIC4-215ENST00000493664 CBX1P83916 185 aa16.6■□□□□ 0.25
ZIC4-215ENST00000493664 ZNF496Q96IT1 587 aaPredicted RBP16.6■□□□□ 0.25
ZIC4-215ENST00000493664 C16orf45Q96MC5 204 aaPredicted RBP16.6■□□□□ 0.25
ZIC4-215ENST00000493664 NAP1L2Q9ULW6 460 aaPredicted RBP16.6■□□□□ 0.25
ZIC4-215ENST00000493664 ZNF609O15014 1411 aa16.6■□□□□ 0.25
ZIC4-215ENST00000493664 NCAPD2Q15021 1401 aa16.6■□□□□ 0.25
ZIC4-215ENST00000493664 TPM3P06753 285 aa16.6■□□□□ 0.25
ZIC4-215ENST00000493664 SCRN1Q12765 414 aa16.6■□□□□ 0.25
ZIC4-215ENST00000493664 RESTQ13127 1097 aa16.6■□□□□ 0.25
ZIC4-215ENST00000493664 PPP4R3BQ5MIZ7 849 aa16.6■□□□□ 0.25
ZIC4-215ENST00000493664 CHAF1AQ13111 956 aaPredicted RBP16.59■□□□□ 0.25
ZIC4-215ENST00000493664 TSGA10IPQ3SY00 556 aa16.59■□□□□ 0.25
ZIC4-215ENST00000493664 USPL1Q5W0Q7 1092 aa16.59■□□□□ 0.25
ZIC4-215ENST00000493664 METTL22Q9BUU2 404 aaPredicted RBP16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms