RNA–Protein interactions for RNA: ENST00000493590.1

NECAB3-214, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 5

Gene NECAB3, Length 625 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-214ENST00000493590 ABCC4O15439 1325 aa22.14■■□□□ 1.14
NECAB3-214ENST00000493590 PER1O15534 1290 aaPredicted RBP22.14■■□□□ 1.13
NECAB3-214ENST00000493590 ZNF157P51786 506 aaPredicted RBP22.14■■□□□ 1.13
NECAB3-214ENST00000493590 GBA2Q9HCG7 927 aaPredicted RBP22.14■■□□□ 1.13
NECAB3-214ENST00000493590 MPNDQ8N594 471 aa22.13■■□□□ 1.13
NECAB3-214ENST00000493590 C2orf69Q8N8R5 385 aa22.13■■□□□ 1.13
NECAB3-214ENST00000493590 KIAA2012Q0VF49 1180 aa22.12■■□□□ 1.13
NECAB3-214ENST00000493590 SAMD7Q7Z3H4 446 aa22.12■■□□□ 1.13
NECAB3-214ENST00000493590 KRT26Q7Z3Y9 468 aa22.12■■□□□ 1.13
NECAB3-214ENST00000493590 PPP1R42Q7Z4L9 355 aa22.12■■□□□ 1.13
NECAB3-214ENST00000493590 CTU1Q7Z7A3 348 aaKnown RBP22.12■■□□□ 1.13
NECAB3-214ENST00000493590 CCDC102AQ96A19 550 aa22.12■■□□□ 1.13
NECAB3-214ENST00000493590 RTFDC1Q9BY42 306 aaPredicted RBP22.12■■□□□ 1.13
NECAB3-214ENST00000493590 ZBTB12Q9Y330 459 aaPredicted RBP22.12■■□□□ 1.13
NECAB3-214ENST00000493590 ADM5C9JUS6 153 aa22.11■■□□□ 1.13
NECAB3-214ENST00000493590 TAF7Q15545 349 aaPredicted RBP22.11■■□□□ 1.13
NECAB3-214ENST00000493590 ZNF34Q8IZ26 560 aa22.11■■□□□ 1.13
NECAB3-214ENST00000493590 CFAP53Q96M91 514 aa22.11■■□□□ 1.13
NECAB3-214ENST00000493590 YDJCA8MPS7 323 aa22.1■■□□□ 1.13
NECAB3-214ENST00000493590 U2AF1L5P0DN76 240 aaPredicted RBP22.1■■□□□ 1.13
NECAB3-214ENST00000493590 U2AF1Q01081 240 aaKnown RBP eCLIP22.1■■□□□ 1.132e-6■■□□□ 12.5
NECAB3-214ENST00000493590 TBC1D10BQ4KMP7 808 aaPredicted RBP22.1■■□□□ 1.13
NECAB3-214ENST00000493590 PCGF6Q9BYE7 350 aa22.1■■□□□ 1.13
NECAB3-214ENST00000493590 POLR2AP24928 1970 aaKnown RBP22.09■■□□□ 1.13
NECAB3-214ENST00000493590 RBM26Q5T8P6 1007 aaKnown RBP22.09■■□□□ 1.13
NECAB3-214ENST00000493590 LAMB2P55268 1798 aa22.08■■□□□ 1.13
NECAB3-214ENST00000493590 SP8Q8IXZ3 490 aa22.08■■□□□ 1.13
NECAB3-214ENST00000493590 DCPSQ96C86 337 aaKnown RBP22.08■■□□□ 1.13
NECAB3-214ENST00000493590 HPS5Q9UPZ3 1129 aa22.08■■□□□ 1.13
NECAB3-214ENST00000493590 NUDCQ9Y266 331 aa22.08■■□□□ 1.13
NECAB3-214ENST00000493590 EGFRP00533 1210 aa22.07■■□□□ 1.12
NECAB3-214ENST00000493590 GIGYF2Q6Y7W6 1299 aaKnown RBP22.07■■□□□ 1.12
NECAB3-214ENST00000493590 UTP14AQ9BVJ6 771 aaKnown RBP22.07■■□□□ 1.12
NECAB3-214ENST00000493590 KDM3BQ7LBC6 1761 aa22.07■■□□□ 1.12
NECAB3-214ENST00000493590 BBOX1O75936 387 aa22.06■■□□□ 1.12
NECAB3-214ENST00000493590 PARP10Q53GL7 1025 aa22.06■■□□□ 1.12
NECAB3-214ENST00000493590 CSRNP1Q96S65 589 aa22.06■■□□□ 1.12
NECAB3-214ENST00000493590 PSMD14O00487 310 aa22.05■■□□□ 1.12
NECAB3-214ENST00000493590 HTATSF1O43719 755 aaKnown RBP22.05■■□□□ 1.12
NECAB3-214ENST00000493590 SLC10A3P09131 477 aa22.05■■□□□ 1.12
NECAB3-214ENST00000493590 TAF1P21675 1872 aa22.05■■□□□ 1.12
NECAB3-214ENST00000493590 DBNDD1Q9H9R9 158 aa22.04■■□□□ 1.12
NECAB3-214ENST00000493590 CLSPNQ9HAW4 1339 aa22.04■■□□□ 1.12
NECAB3-214ENST00000493590 DUOX1Q9NRD9 1551 aa22.04■■□□□ 1.12
NECAB3-214ENST00000493590 HCLS1P14317 486 aaPredicted RBP22.03■■□□□ 1.12
NECAB3-214ENST00000493590 TRIM26Q12899 539 aaPredicted RBP22.03■■□□□ 1.12
NECAB3-214ENST00000493590 DDX46Q7L014 1031 aaKnown RBP22.03■■□□□ 1.12
NECAB3-214ENST00000493590 DPF2Q92785 391 aa22.03■■□□□ 1.12
NECAB3-214ENST00000493590 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
NECAB3-214ENST00000493590 HDAC9Q9UKV0 1011 aa22.03■■□□□ 1.12
NECAB3-214ENST00000493590 ANKRD36CQ5JPF3 1778 aa22.02■■□□□ 1.12
NECAB3-214ENST00000493590 EIF4A1P60842 406 aaKnown RBP22.02■■□□□ 1.12
NECAB3-214ENST00000493590 SLC10A5Q5PT55 438 aa22.02■■□□□ 1.12
NECAB3-214ENST00000493590 PNISRQ8TF01 805 aaKnown RBP22.02■■□□□ 1.12
NECAB3-214ENST00000493590 RIMBP2O15034 1052 aa22.01■■□□□ 1.11
NECAB3-214ENST00000493590 GRAPQ13588 217 aa22.01■■□□□ 1.11
NECAB3-214ENST00000493590 SULF1Q8IWU6 871 aa22.01■■□□□ 1.11
NECAB3-214ENST00000493590 GRAPLQ8TC17 118 aaPredicted RBP22.01■■□□□ 1.11
NECAB3-214ENST00000493590 WASHC4Q2M389 1173 aa22■■□□□ 1.11
NECAB3-214ENST00000493590 KIF4BQ2VIQ3 1234 aa22■■□□□ 1.11
NECAB3-214ENST00000493590 ZNF428Q96B54 188 aa22■■□□□ 1.11
NECAB3-214ENST00000493590 GGA3Q9NZ52 723 aa22■■□□□ 1.11
NECAB3-214ENST00000493590 RASAL3Q86YV0 1011 aa21.99■■□□□ 1.11
NECAB3-214ENST00000493590 CDCA5Q96FF9 252 aa21.99■■□□□ 1.11
NECAB3-214ENST00000493590 DLG5Q8TDM6 1919 aa21.99■■□□□ 1.11
NECAB3-214ENST00000493590 ASTN2O75129 1339 aaPredicted RBP21.99■■□□□ 1.11
NECAB3-214ENST00000493590 DOK7Q18PE1 504 aa21.98■■□□□ 1.11
NECAB3-214ENST00000493590 GCC1Q96CN9 775 aa21.98■■□□□ 1.11
NECAB3-214ENST00000493590 TBC1D8O95759 1140 aa21.97■■□□□ 1.11
NECAB3-214ENST00000493590 PKN2Q16513 984 aaKnown RBP21.97■■□□□ 1.11
NECAB3-214ENST00000493590 ZNF296Q8WUU4 475 aaPredicted RBP21.97■■□□□ 1.11
NECAB3-214ENST00000493590 KCNQ5Q9NR82 932 aa21.97■■□□□ 1.11
NECAB3-214ENST00000493590 NSFL1CQ9UNZ2 370 aaKnown RBP21.97■■□□□ 1.11
NECAB3-214ENST00000493590 LRRC37AA6NMS7 1700 aa21.97■■□□□ 1.11
NECAB3-214ENST00000493590 C6orf229H3BNL8 230 aa21.96■■□□□ 1.11
NECAB3-214ENST00000493590 ECE2O60344 883 aa21.96■■□□□ 1.11
NECAB3-214ENST00000493590 ANXA1P04083 346 aa21.96■■□□□ 1.11
NECAB3-214ENST00000493590 EIF2S2P20042 333 aaKnown RBP21.96■■□□□ 1.11
NECAB3-214ENST00000493590 RPS12P25398 132 aaKnown RBP21.96■■□□□ 1.11
NECAB3-214ENST00000493590 REM2Q8IYK8 340 aaPredicted RBP21.96■■□□□ 1.11
NECAB3-214ENST00000493590 TRMT112Q9UI30 125 aaKnown RBP21.96■■□□□ 1.11
NECAB3-214ENST00000493590 ERBB4Q15303 1308 aa21.95■■□□□ 1.1
NECAB3-214ENST00000493590 RTL9Q8NET4 1388 aa21.95■■□□□ 1.1
NECAB3-214ENST00000493590 DDX60Q8IY21 1712 aaKnown RBP21.94■■□□□ 1.1
NECAB3-214ENST00000493590 PROSER3Q2NL68 480 aa21.94■■□□□ 1.1
NECAB3-214ENST00000493590 NLRP10Q86W26 655 aa21.94■■□□□ 1.1
NECAB3-214ENST00000493590 NEFMP07197 916 aa21.93■■□□□ 1.1
NECAB3-214ENST00000493590 AIMP1Q12904 312 aaKnown RBP21.93■■□□□ 1.1
NECAB3-214ENST00000493590 ANGEL2Q5VTE6 544 aaKnown RBP21.93■■□□□ 1.1
NECAB3-214ENST00000493590 TMC4Q7Z404 712 aa21.93■■□□□ 1.1
NECAB3-214ENST00000493590 SH3TC1Q8TE82 1336 aa21.93■■□□□ 1.1
NECAB3-214ENST00000493590 HABP4Q5JVS0 413 aaKnown RBP21.92■■□□□ 1.1
NECAB3-214ENST00000493590 POLLQ9UGP5 575 aa21.92■■□□□ 1.1
NECAB3-214ENST00000493590 PAPPA2Q9BXP8 1791 aa21.92■■□□□ 1.1
NECAB3-214ENST00000493590 GPSM2P81274 684 aa21.91■■□□□ 1.1
NECAB3-214ENST00000493590 PDIA6Q15084 440 aa21.91■■□□□ 1.1
NECAB3-214ENST00000493590 HSP90AB3PQ58FF7 597 aa21.91■■□□□ 1.1
NECAB3-214ENST00000493590 MOB2Q70IA6 237 aa21.91■■□□□ 1.1
NECAB3-214ENST00000493590 LRP10Q7Z4F1 713 aa21.91■■□□□ 1.1
NECAB3-214ENST00000493590 PPP2R1AP30153 589 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms