RNA–Protein interactions for RNA: ENST00000491433.1

CLCNKA-206, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 3

Gene CLCNKA, Length 824 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-206ENST00000491433 CDC37L1Q7L3B6 337 aa14.8□□□□□ -0.04
CLCNKA-206ENST00000491433 MPNDQ8N594 471 aa14.8□□□□□ -0.04
CLCNKA-206ENST00000491433 OTUD5Q96G74 571 aa14.8□□□□□ -0.04
CLCNKA-206ENST00000491433 NLRP3Q96P20 1036 aa14.8□□□□□ -0.04
CLCNKA-206ENST00000491433 POTEFA5A3E0 1075 aa14.79□□□□□ -0.04
CLCNKA-206ENST00000491433 NEFMP07197 916 aa14.79□□□□□ -0.04
CLCNKA-206ENST00000491433 AOC3Q16853 763 aa14.79□□□□□ -0.04
CLCNKA-206ENST00000491433 PARP10Q53GL7 1025 aa14.79□□□□□ -0.04
CLCNKA-206ENST00000491433 NGEFQ8N5V2 710 aa14.79□□□□□ -0.04
CLCNKA-206ENST00000491433 BCL2L13Q9BXK5 485 aa14.79□□□□□ -0.04
CLCNKA-206ENST00000491433 ATP6V0A2Q9Y487 856 aa14.79□□□□□ -0.04
CLCNKA-206ENST00000491433 U2AF1L5P0DN76 240 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-206ENST00000491433 U2AF1Q01081 240 aaKnown RBP eCLIP14.78□□□□□ -0.04
CLCNKA-206ENST00000491433 CXCL9Q07325 125 aa14.78□□□□□ -0.04
CLCNKA-206ENST00000491433 REM2Q8IYK8 340 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-206ENST00000491433 ZNF296Q8WUU4 475 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-206ENST00000491433 RTFDC1Q9BY42 306 aaPredicted RBP14.78□□□□□ -0.04
CLCNKA-206ENST00000491433 H7C1D1 291 aa14.77□□□□□ -0.05
CLCNKA-206ENST00000491433 GMPSP49915 693 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-206ENST00000491433 SUSD4Q5VX71 490 aa14.77□□□□□ -0.05
CLCNKA-206ENST00000491433 CHRDL2Q6WN34 429 aa14.77□□□□□ -0.05
CLCNKA-206ENST00000491433 GIGYF2Q6Y7W6 1299 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-206ENST00000491433 ZNF34Q8IZ26 560 aa14.77□□□□□ -0.05
CLCNKA-206ENST00000491433 CCER1Q8TC90 406 aaPredicted RBP14.77□□□□□ -0.05
CLCNKA-206ENST00000491433 CSRNP1Q96S65 589 aa14.77□□□□□ -0.05
CLCNKA-206ENST00000491433 RRP7AQ9Y3A4 280 aaKnown RBP14.77□□□□□ -0.05
CLCNKA-206ENST00000491433 ERBB4Q15303 1308 aa14.76□□□□□ -0.05
CLCNKA-206ENST00000491433 H0YGN5 161 aa14.76□□□□□ -0.05
CLCNKA-206ENST00000491433 TCERG1O14776 1098 aaKnown RBP14.76□□□□□ -0.05
CLCNKA-206ENST00000491433 BBOX1O75936 387 aa14.76□□□□□ -0.05
CLCNKA-206ENST00000491433 NTSR2O95665 410 aa14.76□□□□□ -0.05
CLCNKA-206ENST00000491433 GPTP24298 496 aa14.76□□□□□ -0.05
CLCNKA-206ENST00000491433 ZNF157P51786 506 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-206ENST00000491433 DPP8Q6V1X1 898 aaPredicted RBP14.76□□□□□ -0.05
CLCNKA-206ENST00000491433 KDM3BQ7LBC6 1761 aa14.75□□□□□ -0.05
CLCNKA-206ENST00000491433 UBN2Q6ZU65 1347 aa14.75□□□□□ -0.05
CLCNKA-206ENST00000491433 KIAA2012Q0VF49 1180 aa14.75□□□□□ -0.05
CLCNKA-206ENST00000491433 DCTN1Q14203 1278 aa14.75□□□□□ -0.05
CLCNKA-206ENST00000491433 SP8Q8IXZ3 490 aa14.75□□□□□ -0.05
CLCNKA-206ENST00000491433 ZBTB3Q9H5J0 574 aa14.75□□□□□ -0.05
CLCNKA-206ENST00000491433 PRDM6Q9NQX0 595 aa14.75□□□□□ -0.05
CLCNKA-206ENST00000491433 AKAP11Q9UKA4 1901 aa14.74□□□□□ -0.05
CLCNKA-206ENST00000491433 MYL6BP14649 208 aa14.74□□□□□ -0.05
CLCNKA-206ENST00000491433 ZEB1P37275 1124 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-206ENST00000491433 CNGB1Q14028 1251 aaPredicted RBP14.74□□□□□ -0.05
CLCNKA-206ENST00000491433 SLC10A5Q5PT55 438 aa14.74□□□□□ -0.05
CLCNKA-206ENST00000491433 TTLL7Q6ZT98 887 aa14.74□□□□□ -0.05
CLCNKA-206ENST00000491433 TMC4Q7Z404 712 aa14.74□□□□□ -0.05
CLCNKA-206ENST00000491433 RBM27Q9P2N5 1060 aaKnown RBP14.74□□□□□ -0.05
CLCNKA-206ENST00000491433 RANBP2P49792 3224 aaKnown RBP14.73□□□□□ -0.05
CLCNKA-206ENST00000491433 C2orf69Q8N8R5 385 aa14.73□□□□□ -0.05
CLCNKA-206ENST00000491433 DPF2Q92785 391 aa14.73□□□□□ -0.05
CLCNKA-206ENST00000491433 UTP14AQ9BVJ6 771 aaKnown RBP14.73□□□□□ -0.05
CLCNKA-206ENST00000491433 CNOT7Q9UIV1 285 aaKnown RBP14.73□□□□□ -0.05
CLCNKA-206ENST00000491433 ANKRD36CQ5JPF3 1778 aa14.73□□□□□ -0.05
CLCNKA-206ENST00000491433 ABCC4O15439 1325 aa14.72□□□□□ -0.05
CLCNKA-206ENST00000491433 EIF4A1P60842 406 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-206ENST00000491433 DDX46Q7L014 1031 aaKnown RBP14.72□□□□□ -0.05
CLCNKA-206ENST00000491433 RAD17O75943 681 aa14.71□□□□□ -0.05
CLCNKA-206ENST00000491433 SLC10A3P09131 477 aa14.71□□□□□ -0.05
CLCNKA-206ENST00000491433 HIRAP54198 1017 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-206ENST00000491433 HSP90AB3PQ58FF7 597 aa14.71□□□□□ -0.05
CLCNKA-206ENST00000491433 USP48Q86UV5 1035 aa14.71□□□□□ -0.05
CLCNKA-206ENST00000491433 GBA2Q9HCG7 927 aaPredicted RBP14.71□□□□□ -0.05
CLCNKA-206ENST00000491433 MIS18AQ9NYP9 233 aa14.71□□□□□ -0.05
CLCNKA-206ENST00000491433 DLG5Q8TDM6 1919 aa14.7□□□□□ -0.06
CLCNKA-206ENST00000491433 EN2P19622 333 aaPredicted RBP14.7□□□□□ -0.06
CLCNKA-206ENST00000491433 RPS12P25398 132 aaKnown RBP14.7□□□□□ -0.06
CLCNKA-206ENST00000491433 NOM1Q5C9Z4 860 aaKnown RBP14.7□□□□□ -0.06
CLCNKA-206ENST00000491433 MICALL2Q8IY33 904 aa14.7□□□□□ -0.06
CLCNKA-206ENST00000491433 TRPM4Q8TD43 1214 aa14.7□□□□□ -0.06
CLCNKA-206ENST00000491433 DCPSQ96C86 337 aaKnown RBP14.7□□□□□ -0.06
CLCNKA-206ENST00000491433 TBC1D8O95759 1140 aa14.69□□□□□ -0.06
CLCNKA-206ENST00000491433 GRAPQ13588 217 aa14.69□□□□□ -0.06
CLCNKA-206ENST00000491433 C3orf67Q6ZVT6 689 aa14.69□□□□□ -0.06
CLCNKA-206ENST00000491433 KRT26Q7Z3Y9 468 aa14.69□□□□□ -0.06
CLCNKA-206ENST00000491433 GRAPLQ8TC17 118 aaPredicted RBP14.69□□□□□ -0.06
CLCNKA-206ENST00000491433 PNNQ9H307 717 aaKnown RBP14.69□□□□□ -0.06
CLCNKA-206ENST00000491433 UNC80Q8N2C7 3258 aa14.69□□□□□ -0.06
CLCNKA-206ENST00000491433 LAMB2P55268 1798 aa14.68□□□□□ -0.06
CLCNKA-206ENST00000491433 KIAA0100Q14667 2235 aaKnown RBP14.68□□□□□ -0.06
CLCNKA-206ENST00000491433 GPR25O00155 361 aa14.68□□□□□ -0.06
CLCNKA-206ENST00000491433 POLR2AP24928 1970 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-206ENST00000491433 DDX60Q8IY21 1712 aaKnown RBP14.67□□□□□ -0.06
CLCNKA-206ENST00000491433 PPP2R1AP30153 589 aa14.67□□□□□ -0.06
CLCNKA-206ENST00000491433 ANKRD13DQ6ZTN6 518 aa14.67□□□□□ -0.06
CLCNKA-206ENST00000491433 FKTNO75072 461 aa14.66□□□□□ -0.06
CLCNKA-206ENST00000491433 COL9A1P20849 921 aa14.66□□□□□ -0.06
CLCNKA-206ENST00000491433 WASHC4Q2M389 1173 aa14.66□□□□□ -0.06
CLCNKA-206ENST00000491433 EYA3Q99504 573 aa14.66□□□□□ -0.06
CLCNKA-206ENST00000491433 BRCA2P51587 3418 aa14.66□□□□□ -0.06
CLCNKA-206ENST00000491433 YDJCA8MPS7 323 aa14.65□□□□□ -0.06
CLCNKA-206ENST00000491433 SLC51AQ86UW1 340 aa14.65□□□□□ -0.06
CLCNKA-206ENST00000491433 SULF1Q8IWU6 871 aa14.65□□□□□ -0.06
CLCNKA-206ENST00000491433 TRMT112Q9UI30 125 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-206ENST00000491433 LRRC37AA6NMS7 1700 aa14.65□□□□□ -0.06
CLCNKA-206ENST00000491433 RBBP6Q7Z6E9 1792 aaKnown RBP14.65□□□□□ -0.06
CLCNKA-206ENST00000491433 PAPPA2Q9BXP8 1791 aa14.65□□□□□ -0.06
CLCNKA-206ENST00000491433 SH3TC1Q8TE82 1336 aa14.65□□□□□ -0.06
CLCNKA-206ENST00000491433 PSMD14O00487 310 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms