RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 HTTP42858 3142 aa10□□□□□ -0.81
PDLIM1-203ENST00000490391 PPP1R15BQ5SWA1 713 aa10□□□□□ -0.81
PDLIM1-203ENST00000490391 CST9Q5W186 159 aa10□□□□□ -0.81
PDLIM1-203ENST00000490391 PNMA8AQ86V59 439 aaPredicted RBP10□□□□□ -0.81
PDLIM1-203ENST00000490391 ZNF775Q96BV0 537 aaPredicted RBP10□□□□□ -0.81
PDLIM1-203ENST00000490391 CARD11Q9BXL7 1154 aa10□□□□□ -0.81
PDLIM1-203ENST00000490391 CRISPLD2Q9H0B8 497 aa10□□□□□ -0.81
PDLIM1-203ENST00000490391 CEP290O15078 2479 aa10□□□□□ -0.81
PDLIM1-203ENST00000490391 HSP90AB1P08238 724 aaKnown RBP9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 COL9A1P20849 921 aa9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 CABP4P57796 275 aa9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 GRM1Q13255 1194 aa9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 PAXIP1Q6ZW49 1069 aaPredicted RBP9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 DNAJC10Q8IXB1 793 aa9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 C7orf43Q8WVR3 580 aa9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 BRIP1Q9BX63 1249 aa9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 PDZRN3Q9UPQ7 1066 aa9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 TLL2Q9Y6L7 1015 aa9.99□□□□□ -0.81
PDLIM1-203ENST00000490391 RANBP2P49792 3224 aaKnown RBP9.98□□□□□ -0.81
PDLIM1-203ENST00000490391 CYP19A1P11511 503 aaPredicted RBP9.98□□□□□ -0.81
PDLIM1-203ENST00000490391 BRPF1P55201 1214 aaPredicted RBP9.98□□□□□ -0.81
PDLIM1-203ENST00000490391 PRR5LQ6MZQ0 368 aa9.98□□□□□ -0.81
PDLIM1-203ENST00000490391 PRPF40BQ6NWY9 871 aaKnown RBP9.98□□□□□ -0.81
PDLIM1-203ENST00000490391 PRKD2Q9BZL6 878 aa9.98□□□□□ -0.81
PDLIM1-203ENST00000490391 ZBTB1Q9Y2K1 713 aa9.98□□□□□ -0.81
PDLIM1-203ENST00000490391 TRAF5O00463 557 aa9.97□□□□□ -0.81
PDLIM1-203ENST00000490391 PDE6BP35913 854 aa9.97□□□□□ -0.81
PDLIM1-203ENST00000490391 SOGA3Q5TF21 947 aa9.97□□□□□ -0.81
PDLIM1-203ENST00000490391 NFATC2IPQ8NCF5 419 aa9.97□□□□□ -0.81
PDLIM1-203ENST00000490391 KIAA1468Q9P260 1216 aa9.97□□□□□ -0.81
PDLIM1-203ENST00000490391 TRIOBPQ9H2D6 2365 aa9.97□□□□□ -0.81
PDLIM1-203ENST00000490391 BRCA2P51587 3418 aa9.97□□□□□ -0.81
PDLIM1-203ENST00000490391 SCN7AQ01118 1682 aa9.96□□□□□ -0.81
PDLIM1-203ENST00000490391 CENPFP49454 3210 aa9.96□□□□□ -0.81
PDLIM1-203ENST00000490391 FZD9O00144 591 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 SRGNP10124 158 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 STYK1Q6J9G0 422 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 SAPCD2Q86UD0 394 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 CCDC24Q8N4L8 307 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 CNKSR1Q969H4 720 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 SIN3AQ96ST3 1273 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 COL6A3P12111 3177 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 BCORQ6W2J9 1755 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 SCN11AQ9UI33 1791 aa9.96□□□□□ -0.82
PDLIM1-203ENST00000490391 PPM1GO15355 546 aaPredicted RBP9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 EIF4A2Q14240 407 aaKnown RBP9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 TBC1D9BQ66K14 1250 aa9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 CIAPIN1Q6FI81 312 aa9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 ZNF530Q6P9A1 599 aaPredicted RBP9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 BICDL1Q6ZP65 573 aa9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 GPC2Q8N158 579 aa9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 HHIPL1Q96JK4 782 aa9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 ZNF277Q9NRM2 450 aaPredicted RBP9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 TSR3Q9UJK0 312 aaKnown RBP9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 SNED1Q8TER0 1413 aa9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 COL4A5P29400 1685 aa9.95□□□□□ -0.82
PDLIM1-203ENST00000490391 ST20-MTHFSA0A0A6YYL1 179 aa9.94□□□□□ -0.82
PDLIM1-203ENST00000490391 MTHFSP49914 203 aa9.94□□□□□ -0.82
PDLIM1-203ENST00000490391 FKBP4Q02790 459 aaKnown RBP eCLIP9.94□□□□□ -0.82
PDLIM1-203ENST00000490391 CCDC93Q567U6 631 aa9.94□□□□□ -0.82
PDLIM1-203ENST00000490391 HABP4Q5JVS0 413 aaKnown RBP9.94□□□□□ -0.82
PDLIM1-203ENST00000490391 GCC1Q96CN9 775 aa9.94□□□□□ -0.82
PDLIM1-203ENST00000490391 ZIC5Q96T25 663 aa9.94□□□□□ -0.82
PDLIM1-203ENST00000490391 PCDHGA10Q9Y5H3 936 aa9.94□□□□□ -0.82
PDLIM1-203ENST00000490391 V9GY48 417 aaPredicted RBP9.94□□□□□ -0.82
PDLIM1-203ENST00000490391 SCNN1DP51172 638 aa9.93□□□□□ -0.82
PDLIM1-203ENST00000490391 PLEKHO1Q53GL0 409 aaPredicted RBP9.93□□□□□ -0.82
PDLIM1-203ENST00000490391 OLFM4Q6UX06 510 aa9.93□□□□□ -0.82
PDLIM1-203ENST00000490391 POLKQ9UBT6 870 aa9.93□□□□□ -0.82
PDLIM1-203ENST00000490391 EIF5P55010 431 aaKnown RBP9.92□□□□□ -0.82
PDLIM1-203ENST00000490391 MASTLQ96GX5 879 aa9.92□□□□□ -0.82
PDLIM1-203ENST00000490391 CARD14Q9BXL6 1004 aa9.92□□□□□ -0.82
PDLIM1-203ENST00000490391 HPS5Q9UPZ3 1129 aa9.92□□□□□ -0.82
PDLIM1-203ENST00000490391 MRC1P22897 1456 aa9.91□□□□□ -0.82
PDLIM1-203ENST00000490391 IARSP41252 1262 aaKnown RBP9.91□□□□□ -0.82
PDLIM1-203ENST00000490391 EPS15P42566 896 aa9.91□□□□□ -0.82
PDLIM1-203ENST00000490391 AMOTQ4VCS5 1084 aa9.91□□□□□ -0.82
PDLIM1-203ENST00000490391 CNBD1Q8NA66 436 aa9.91□□□□□ -0.82
PDLIM1-203ENST00000490391 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.91□□□□□ -0.82
PDLIM1-203ENST00000490391 SEPT9Q9UHD8 586 aaPredicted RBP9.91□□□□□ -0.82
PDLIM1-203ENST00000490391 UBR2Q8IWV8 1755 aa9.91□□□□□ -0.82
PDLIM1-203ENST00000490391 CELF2O95319 508 aaKnown RBP9.9□□□□□ -0.82
PDLIM1-203ENST00000490391 FXR1P51114 621 aaKnown RBP eCLIP9.9□□□□□ -0.82
PDLIM1-203ENST00000490391 USP50Q70EL3 339 aaPredicted RBP9.9□□□□□ -0.82
PDLIM1-203ENST00000490391 FBXW7Q969H0 707 aa9.9□□□□□ -0.82
PDLIM1-203ENST00000490391 KLRG2A4D1S0 409 aaPredicted RBP9.89□□□□□ -0.83
PDLIM1-203ENST00000490391 CANXP27824 592 aaKnown RBP9.89□□□□□ -0.83
PDLIM1-203ENST00000490391 MAP3K9P80192 1104 aa9.89□□□□□ -0.83
PDLIM1-203ENST00000490391 NOGQ13253 232 aa9.89□□□□□ -0.83
PDLIM1-203ENST00000490391 SLC39A6Q13433 755 aa9.89□□□□□ -0.83
PDLIM1-203ENST00000490391 AEBP1Q8IUX7 1158 aa9.89□□□□□ -0.83
PDLIM1-203ENST00000490391 NBPF15Q8N660 670 aa9.89□□□□□ -0.83
PDLIM1-203ENST00000490391 LRCH3Q96II8 777 aa9.89□□□□□ -0.83
PDLIM1-203ENST00000490391 SAGE1Q9NXZ1 904 aa9.89□□□□□ -0.83
PDLIM1-203ENST00000490391 KIAA0100Q14667 2235 aaKnown RBP9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 PDE4AP27815 886 aa9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 LMOD1P29536 600 aaPredicted RBP9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 NEUROD1Q13562 356 aa9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 C1orf141Q5JVX7 400 aa9.88□□□□□ -0.83
PDLIM1-203ENST00000490391 TYW1BQ6NUM6 668 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms