RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 PDCL2Q8N4E4 241 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 LSG1Q9H089 658 aaKnown RBP9.11□□□□□ -0.95
BEST3-205ENST00000488961 KIF24Q5T7B8 1368 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 NEURL1BA8MQ27 555 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 APPP05067 770 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 SLC20A2Q08357 652 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 LARP1Q6PKG0 1096 aaKnown RBP9.11□□□□□ -0.95
BEST3-205ENST00000488961 LMBR1LQ6UX01 489 aa9.11□□□□□ -0.95
BEST3-205ENST00000488961 PUS3Q9BZE2 481 aaKnown RBP9.11□□□□□ -0.95
BEST3-205ENST00000488961 CIZ1Q9ULV3 898 aaPredicted RBP9.11□□□□□ -0.95
BEST3-205ENST00000488961 KDM6AO15550 1401 aaPredicted RBP9.11□□□□□ -0.95
BEST3-205ENST00000488961 A0A087WWV3 80 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 SNAP23O00161 211 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 PSEN1P49768 467 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 KCNQ4P56696 695 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 PI16Q6UXB8 463 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 FBXW7Q969H0 707 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 ANKARQ7Z5J8 1434 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 NBPF26B4DH59 902 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 AMOTQ4VCS5 1084 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 LRRC24Q50LG9 513 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 NBPF14Q5TI25 921 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 NBPF10Q6P3W6 841 aaKnown RBP9.1□□□□□ -0.95
BEST3-205ENST00000488961 USP48Q86UV5 1035 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 NBPF15Q8N660 670 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 BCL2L12Q9HB09 334 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 ECHDC1Q9NTX5 307 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 TFIP11Q9UBB9 837 aaKnown RBP9.1□□□□□ -0.95
BEST3-205ENST00000488961 RBM8AQ9Y5S9 174 aaKnown RBP9.1□□□□□ -0.95
BEST3-205ENST00000488961 ZNF335Q9H4Z2 1342 aaPredicted RBP9.1□□□□□ -0.95
BEST3-205ENST00000488961 C1orf167Q5SNV9 1468 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 NEXNQ0ZGT2 675 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 GCKRQ14397 625 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 VPS53Q5VIR6 699 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 DDX21Q9NR30 783 aaKnown RBP eCLIP9.1□□□□□ -0.95
BEST3-205ENST00000488961 STAP2Q9UGK3 403 aa9.1□□□□□ -0.95
BEST3-205ENST00000488961 HSPA4P34932 840 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 SKOR2Q2VWA4 1001 aaPredicted RBP9.09□□□□□ -0.95
BEST3-205ENST00000488961 EP400NLQ6ZTU2 488 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 TIGD1Q96MW7 591 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 DBNLQ9UJU6 430 aaKnown RBP9.09□□□□□ -0.95
BEST3-205ENST00000488961 CYP2E1P05181 493 aaPredicted RBP9.09□□□□□ -0.95
BEST3-205ENST00000488961 GJB2P29033 226 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 EVA1CP58658 441 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 NUCB2P80303 420 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 GUCY1B3Q02153 619 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 DNM1Q05193 864 aaKnown RBP9.09□□□□□ -0.95
BEST3-205ENST00000488961 CAMK4Q16566 473 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 IFNL2Q8IZJ0 200 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 FAM89AQ96GI7 184 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 PDLIM2Q96JY6 352 aa9.09□□□□□ -0.95
BEST3-205ENST00000488961 ERICH4A6NGS2 130 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 GOLIM4O00461 696 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 RAB11FIP3O75154 756 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 MMP14P50281 582 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 HAND2P61296 217 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 ME3Q16798 604 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 C17orf53Q8N3J3 647 aaPredicted RBP9.08□□□□□ -0.96
BEST3-205ENST00000488961 LINS1Q8NG48 757 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 HYPKQ9NX55 129 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 BCCIPQ9P287 314 aaKnown RBP eCLIP9.08□□□□□ -0.96
BEST3-205ENST00000488961 DDX58O95786 925 aaKnown RBP9.08□□□□□ -0.96
BEST3-205ENST00000488961 SYT1P21579 422 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 FKBP4Q02790 459 aaKnown RBP eCLIP9.08□□□□□ -0.96
BEST3-205ENST00000488961 KLHL40Q2TBA0 621 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 PDRG1Q9NUG6 133 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 ASAP1Q9ULH1 1129 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 TPCN1Q9ULQ1 816 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 RAD50Q92878 1312 aa9.08□□□□□ -0.96
BEST3-205ENST00000488961 LOC102724159A0A0B4J2E5 919 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 JAK2O60674 1132 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 GLRX3O76003 335 aaKnown RBP9.07□□□□□ -0.96
BEST3-205ENST00000488961 ST3GAL1Q11201 340 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 PWP2Q15269 919 aaKnown RBP9.07□□□□□ -0.96
BEST3-205ENST00000488961 GPHNQ9NQX3 736 aaPredicted RBP9.07□□□□□ -0.96
BEST3-205ENST00000488961 SMC3Q9UQE7 1217 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 KIF3AQ9Y496 699 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 LRRC37A3O60309 1634 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 SLFN14P0C7P3 912 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 CCT2P78371 535 aaKnown RBP9.07□□□□□ -0.96
BEST3-205ENST00000488961 CREB3L3Q68CJ9 461 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 TTLL5Q6EMB2 1281 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 HELBQ8NG08 1087 aaPredicted RBP9.07□□□□□ -0.96
BEST3-205ENST00000488961 ADAMTSL3P82987 1691 aa9.07□□□□□ -0.96
BEST3-205ENST00000488961 MED1Q15648 1581 aaPredicted RBP9.06□□□□□ -0.96
BEST3-205ENST00000488961 HSP90B1P14625 803 aaKnown RBP9.06□□□□□ -0.96
BEST3-205ENST00000488961 GIMAP6Q6P9H5 292 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 ERCC4Q92889 916 aaPredicted RBP9.06□□□□□ -0.96
BEST3-205ENST00000488961 FTOQ9C0B1 505 aaKnown RBP eCLIP9.06□□□□□ -0.96
BEST3-205ENST00000488961 CACNA1FO60840 1977 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 C5P01031 1676 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 PATL2C9JE40 543 aaKnown RBP9.06□□□□□ -0.96
BEST3-205ENST00000488961 SNRPA1P09661 255 aaKnown RBP9.06□□□□□ -0.96
BEST3-205ENST00000488961 ADORA1P30542 326 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 PTPN12Q05209 780 aaKnown RBP9.06□□□□□ -0.96
BEST3-205ENST00000488961 KIAA2012Q0VF49 1180 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 BRINP3Q76B58 766 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 CDC37L1Q7L3B6 337 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 ACSBG1Q96GR2 724 aa9.06□□□□□ -0.96
BEST3-205ENST00000488961 COL15A1P39059 1388 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms