RNA–Protein interactions for RNA: ENST00000488590.1

SUPT20H-218, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 4

Gene SUPT20H, Length 572 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-218ENST00000488590 NBPF10Q6P3W6 841 aaKnown RBP12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 C3orf67Q6ZVT6 689 aa12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 IL17REQ8NFR9 667 aa12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 ZBTB12Q9Y330 459 aaPredicted RBP12.67□□□□□ -0.38
SUPT20H-218ENST00000488590 FKTNO75072 461 aa12.66□□□□□ -0.38
SUPT20H-218ENST00000488590 KIAA2012Q0VF49 1180 aa12.66□□□□□ -0.38
SUPT20H-218ENST00000488590 TNIP1Q15025 636 aa12.66□□□□□ -0.38
SUPT20H-218ENST00000488590 TBC1D10BQ4KMP7 808 aaPredicted RBP12.66□□□□□ -0.38
SUPT20H-218ENST00000488590 NPM2Q86SE8 214 aaKnown RBP12.66□□□□□ -0.38
SUPT20H-218ENST00000488590 DPF2Q92785 391 aa12.66□□□□□ -0.38
SUPT20H-218ENST00000488590 FMNL2Q96PY5 1086 aa12.66□□□□□ -0.38
SUPT20H-218ENST00000488590 ATP6V0A2Q9Y487 856 aa12.66□□□□□ -0.38
SUPT20H-218ENST00000488590 ASTN2O75129 1339 aaPredicted RBP12.65□□□□□ -0.38
SUPT20H-218ENST00000488590 CDCA5Q96FF9 252 aa12.65□□□□□ -0.38
SUPT20H-218ENST00000488590 PRO3102Q9H379 93 aa12.65□□□□□ -0.38
SUPT20H-218ENST00000488590 RBM27Q9P2N5 1060 aaKnown RBP12.65□□□□□ -0.38
SUPT20H-218ENST00000488590 SPTBN5Q9NRC6 3674 aaKnown RBP12.64□□□□□ -0.39
SUPT20H-218ENST00000488590 CHRDL2Q6WN34 429 aa12.64□□□□□ -0.39
SUPT20H-218ENST00000488590 OTOP1Q7RTM1 612 aa12.64□□□□□ -0.39
SUPT20H-218ENST00000488590 RPGRQ92834 1020 aaKnown RBP12.64□□□□□ -0.39
SUPT20H-218ENST00000488590 ARMC5Q96C12 935 aa12.64□□□□□ -0.39
SUPT20H-218ENST00000488590 DCPSQ96C86 337 aaKnown RBP12.64□□□□□ -0.39
SUPT20H-218ENST00000488590 HMOX1P09601 288 aa12.63□□□□□ -0.39
SUPT20H-218ENST00000488590 GTF2E1P29083 439 aaPredicted RBP12.63□□□□□ -0.39
SUPT20H-218ENST00000488590 MOB2Q70IA6 237 aa12.63□□□□□ -0.39
SUPT20H-218ENST00000488590 DUOX1Q9NRD9 1551 aa12.62□□□□□ -0.39
SUPT20H-218ENST00000488590 SUPT20HQ8NEM7 779 aa12.62□□□□□ -0.39
SUPT20H-218ENST00000488590 RBM17Q96I25 401 aaKnown RBP12.62□□□□□ -0.39
SUPT20H-218ENST00000488590 TRIM17Q9Y577 477 aa12.62□□□□□ -0.39
SUPT20H-218ENST00000488590 UBN2Q6ZU65 1347 aa12.62□□□□□ -0.39
SUPT20H-218ENST00000488590 PSMD14O00487 310 aa12.61□□□□□ -0.39
SUPT20H-218ENST00000488590 FKBP1BP68106 108 aa12.61□□□□□ -0.39
SUPT20H-218ENST00000488590 TEFQ10587 303 aa12.61□□□□□ -0.39
SUPT20H-218ENST00000488590 NYXQ9GZU5 481 aa12.61□□□□□ -0.39
SUPT20H-218ENST00000488590 GGA3Q9NZ52 723 aa12.61□□□□□ -0.39
SUPT20H-218ENST00000488590 PTPN22Q9Y2R2 807 aa12.61□□□□□ -0.39
SUPT20H-218ENST00000488590 CEMIPQ8WUJ3 1361 aa12.6□□□□□ -0.39
SUPT20H-218ENST00000488590 IBTKQ9P2D0 1353 aaPredicted RBP12.6□□□□□ -0.39
SUPT20H-218ENST00000488590 CAP1Q01518 475 aa12.6□□□□□ -0.39
SUPT20H-218ENST00000488590 RBM26Q5T8P6 1007 aaKnown RBP12.6□□□□□ -0.39
SUPT20H-218ENST00000488590 SULF1Q8IWU6 871 aa12.6□□□□□ -0.39
SUPT20H-218ENST00000488590 UBE2Q2LH0YL09 131 aa12.59□□□□□ -0.39
SUPT20H-218ENST00000488590 SUSD4Q5VX71 490 aa12.59□□□□□ -0.39
SUPT20H-218ENST00000488590 DPP8Q6V1X1 898 aaPredicted RBP12.59□□□□□ -0.39
SUPT20H-218ENST00000488590 MPNDQ8N594 471 aa12.59□□□□□ -0.39
SUPT20H-218ENST00000488590 COL25A1Q9BXS0 654 aaPredicted RBP12.59□□□□□ -0.39
SUPT20H-218ENST00000488590 KCNQ5Q9NR82 932 aa12.59□□□□□ -0.39
SUPT20H-218ENST00000488590 ABCC4O15439 1325 aa12.59□□□□□ -0.39
SUPT20H-218ENST00000488590 RTL9Q8NET4 1388 aa12.58□□□□□ -0.4
SUPT20H-218ENST00000488590 SOX1O00570 391 aaPredicted RBP12.58□□□□□ -0.4
SUPT20H-218ENST00000488590 NTSR2O95665 410 aa12.58□□□□□ -0.4
SUPT20H-218ENST00000488590 KIF4BQ2VIQ3 1234 aa12.58□□□□□ -0.4
SUPT20H-218ENST00000488590 SP8Q8IXZ3 490 aa12.58□□□□□ -0.4
SUPT20H-218ENST00000488590 RPS12P25398 132 aaKnown RBP12.57□□□□□ -0.4
SUPT20H-218ENST00000488590 ZNF333Q96JL9 665 aa12.57□□□□□ -0.4
SUPT20H-218ENST00000488590 ZNF609O15014 1411 aa12.56□□□□□ -0.4
SUPT20H-218ENST00000488590 BTBD11A6QL63 1104 aa12.56□□□□□ -0.4
SUPT20H-218ENST00000488590 GNAT3A8MTJ3 354 aa12.56□□□□□ -0.4
SUPT20H-218ENST00000488590 SNRPA1P09661 255 aaKnown RBP12.56□□□□□ -0.4
SUPT20H-218ENST00000488590 ANGEL2Q5VTE6 544 aaKnown RBP12.56□□□□□ -0.4
SUPT20H-218ENST00000488590 NUP98P52948 1817 aa12.55□□□□□ -0.4
SUPT20H-218ENST00000488590 ERVV-1B6SEH8 477 aa12.55□□□□□ -0.4
SUPT20H-218ENST00000488590 BBOX1O75936 387 aa12.55□□□□□ -0.4
SUPT20H-218ENST00000488590 GPTP24298 496 aa12.55□□□□□ -0.4
SUPT20H-218ENST00000488590 SREBF2Q12772 1141 aa12.55□□□□□ -0.4
SUPT20H-218ENST00000488590 MKRN3Q13064 507 aaKnown RBP12.55□□□□□ -0.4
SUPT20H-218ENST00000488590 SLC10A5Q5PT55 438 aa12.55□□□□□ -0.4
SUPT20H-218ENST00000488590 ZNF34Q8IZ26 560 aa12.55□□□□□ -0.4
SUPT20H-218ENST00000488590 MORC1Q86VD1 984 aa12.54□□□□□ -0.4
SUPT20H-218ENST00000488590 LRCH3Q96II8 777 aa12.54□□□□□ -0.4
SUPT20H-218ENST00000488590 TMX4Q9H1E5 349 aaPredicted RBP12.54□□□□□ -0.4
SUPT20H-218ENST00000488590 DBNDD1Q9H9R9 158 aa12.54□□□□□ -0.4
SUPT20H-218ENST00000488590 SCAF8Q9UPN6 1271 aaKnown RBP12.54□□□□□ -0.4
SUPT20H-218ENST00000488590 MAP3K15Q6ZN16 1313 aa12.54□□□□□ -0.4
SUPT20H-218ENST00000488590 ZNF280AP59817 542 aaPredicted RBP12.53□□□□□ -0.4
SUPT20H-218ENST00000488590 SCARF1Q14162 830 aa12.53□□□□□ -0.4
SUPT20H-218ENST00000488590 PRAMEF18Q5VWM3 479 aa12.53□□□□□ -0.4
SUPT20H-218ENST00000488590 TTLL7Q6ZT98 887 aa12.53□□□□□ -0.4
SUPT20H-218ENST00000488590 CD99L2Q8TCZ2 262 aa12.53□□□□□ -0.4
SUPT20H-218ENST00000488590 NLRP3Q96P20 1036 aa12.53□□□□□ -0.4
SUPT20H-218ENST00000488590 TMEM106CQ9BVX2 250 aa12.53□□□□□ -0.4
SUPT20H-218ENST00000488590 KDM3BQ7LBC6 1761 aa12.52□□□□□ -0.41
SUPT20H-218ENST00000488590 VIL1P09327 827 aaKnown RBP12.52□□□□□ -0.41
SUPT20H-218ENST00000488590 PANK3Q9H999 370 aa12.52□□□□□ -0.41
SUPT20H-218ENST00000488590 SCN9AQ15858 1988 aa12.52□□□□□ -0.41
SUPT20H-218ENST00000488590 LRRC37AA6NMS7 1700 aa12.51□□□□□ -0.41
SUPT20H-218ENST00000488590 WTIPA6NIX2 430 aaPredicted RBP12.51□□□□□ -0.41
SUPT20H-218ENST00000488590 IGF2BP3O00425 579 aaKnown RBP eCLIP12.51□□□□□ -0.41
SUPT20H-218ENST00000488590 ALDH1A1P00352 501 aa12.51□□□□□ -0.41
SUPT20H-218ENST00000488590 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
SUPT20H-218ENST00000488590 SPRYD7Q5W111 196 aa12.51□□□□□ -0.41
SUPT20H-218ENST00000488590 IFNL1Q8IU54 200 aa12.51□□□□□ -0.41
SUPT20H-218ENST00000488590 MUC3AQ02505 3323 aa12.5□□□□□ -0.41
SUPT20H-218ENST00000488590 WASHC4Q2M389 1173 aa12.5□□□□□ -0.41
SUPT20H-218ENST00000488590 LDLRAD1Q5T700 205 aa12.5□□□□□ -0.41
SUPT20H-218ENST00000488590 GAS2L2Q8NHY3 880 aa12.5□□□□□ -0.41
SUPT20H-218ENST00000488590 ERO1AQ96HE7 468 aa12.5□□□□□ -0.41
SUPT20H-218ENST00000488590 EFCC1Q9HA90 598 aa12.5□□□□□ -0.41
SUPT20H-218ENST00000488590 ECE2O60344 883 aa12.49□□□□□ -0.41
SUPT20H-218ENST00000488590 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms