RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 CD163L1Q9NR16 1453 aa8.33□□□□□ -1.08
CDHR3-213ENST00000488386 ST20-MTHFSA0A0A6YYL1 179 aa8.33□□□□□ -1.08
CDHR3-213ENST00000488386 EIF4G2P78344 907 aaKnown RBP eCLIP8.33□□□□□ -1.08
CDHR3-213ENST00000488386 NBPF20Q3BBV1 942 aa8.33□□□□□ -1.08
CDHR3-213ENST00000488386 NME9Q86XW9 330 aa8.33□□□□□ -1.08
CDHR3-213ENST00000488386 ZMYND15Q9H091 742 aa8.33□□□□□ -1.08
CDHR3-213ENST00000488386 SLC12A5Q9H2X9 1139 aa8.33□□□□□ -1.08
CDHR3-213ENST00000488386 ALG2Q9H553 416 aa8.33□□□□□ -1.08
CDHR3-213ENST00000488386 CDV3Q9UKY7 258 aaKnown RBP8.33□□□□□ -1.08
CDHR3-213ENST00000488386 TIMELESSQ9UNS1 1208 aa8.33□□□□□ -1.08
CDHR3-213ENST00000488386 COL18A1P39060 1754 aa8.33□□□□□ -1.08
CDHR3-213ENST00000488386 COL5A2P05997 1499 aaPredicted RBP8.32□□□□□ -1.08
CDHR3-213ENST00000488386 BLMP54132 1417 aaPredicted RBP8.32□□□□□ -1.08
CDHR3-213ENST00000488386 CPSF1Q10570 1443 aaKnown RBP8.32□□□□□ -1.08
CDHR3-213ENST00000488386 ST8SIA5O15466 376 aa8.32□□□□□ -1.08
CDHR3-213ENST00000488386 TRAK2O60296 914 aa8.32□□□□□ -1.08
CDHR3-213ENST00000488386 DGAT1O75907 488 aa8.32□□□□□ -1.08
CDHR3-213ENST00000488386 AVPP01185 164 aa8.32□□□□□ -1.08
CDHR3-213ENST00000488386 NR5A1Q13285 461 aa8.32□□□□□ -1.08
CDHR3-213ENST00000488386 KLF16Q9BXK1 252 aaPredicted RBP8.32□□□□□ -1.08
CDHR3-213ENST00000488386 CEP126Q9P2H0 1117 aa8.32□□□□□ -1.08
CDHR3-213ENST00000488386 CPDO75976 1380 aa8.32□□□□□ -1.08
CDHR3-213ENST00000488386 TIMP2P16035 220 aa8.31□□□□□ -1.08
CDHR3-213ENST00000488386 Q6ZNB5 142 aa8.31□□□□□ -1.08
CDHR3-213ENST00000488386 WWC1Q8IX03 1113 aa8.31□□□□□ -1.08
CDHR3-213ENST00000488386 CCDC116Q8IYX3 515 aa8.31□□□□□ -1.08
CDHR3-213ENST00000488386 TESK2Q96S53 571 aa8.31□□□□□ -1.08
CDHR3-213ENST00000488386 ZFAND3Q9H8U3 227 aa8.31□□□□□ -1.08
CDHR3-213ENST00000488386 TMPRSS4Q9NRS4 437 aa8.31□□□□□ -1.08
CDHR3-213ENST00000488386 A0A1W2PP64 1363 aa8.31□□□□□ -1.08
CDHR3-213ENST00000488386 TNS1Q9HBL0 1735 aaKnown RBP8.3□□□□□ -1.08
CDHR3-213ENST00000488386 ERVH48-1M5A8F1 160 aa8.3□□□□□ -1.08
CDHR3-213ENST00000488386 PIK3CDO00329 1044 aa8.3□□□□□ -1.08
CDHR3-213ENST00000488386 FBLN1P23142 703 aa8.3□□□□□ -1.08
CDHR3-213ENST00000488386 PPP1R26Q5T8A7 1209 aaPredicted RBP8.3□□□□□ -1.08
CDHR3-213ENST00000488386 ITPKCQ96DU7 683 aa8.3□□□□□ -1.08
CDHR3-213ENST00000488386 SBNO2Q9Y2G9 1366 aa8.3□□□□□ -1.08
CDHR3-213ENST00000488386 LTN1O94822 1766 aa8.3□□□□□ -1.08
CDHR3-213ENST00000488386 NFAT5O94916 1531 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 TRIM37O94972 964 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 WDR4P57081 412 aaKnown RBP8.29□□□□□ -1.08
CDHR3-213ENST00000488386 SF3B2Q13435 895 aaKnown RBP8.29□□□□□ -1.08
CDHR3-213ENST00000488386 TSGA10IPQ3SY00 556 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 TOM1L2Q6ZVM7 507 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 PHTF2Q8N3S3 785 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 TCP11L2Q8N4U5 519 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 GLMNQ92990 594 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 CCDC85AQ96PX6 553 aaPredicted RBP8.29□□□□□ -1.08
CDHR3-213ENST00000488386 USP47Q96K76 1375 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 WNK3Q9BYP7 1800 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 RGPD1P0DJD0 1748 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 TTC21AQ8NDW8 1320 aa8.29□□□□□ -1.08
CDHR3-213ENST00000488386 BRD4O60885 1362 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-213ENST00000488386 AATKQ6ZMQ8 1374 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 ZIC2O95409 532 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-213ENST00000488386 CSB-PGBD3P0DP91 1061 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 SOX11P35716 441 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 MCCD1P59942 119 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-213ENST00000488386 SEMA3FQ13275 785 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 HDGFL2Q7Z4V5 671 aaPredicted RBP8.28□□□□□ -1.08
CDHR3-213ENST00000488386 ARHGEF25Q86VW2 580 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 CCDC125Q86Z20 511 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 UCN2Q96RP3 112 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 AAASQ9NRG9 546 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 LRRC37A3O60309 1634 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 CRB1P82279 1406 aa8.28□□□□□ -1.08
CDHR3-213ENST00000488386 PARP4Q9UKK3 1724 aaKnown RBP8.27□□□□□ -1.09
CDHR3-213ENST00000488386 PDE3BQ13370 1112 aa8.27□□□□□ -1.09
CDHR3-213ENST00000488386 EZH2Q15910 746 aaKnown RBP8.27□□□□□ -1.09
CDHR3-213ENST00000488386 HDGFL1Q5TGJ6 251 aa8.27□□□□□ -1.09
CDHR3-213ENST00000488386 CRIPAKQ8N1N5 446 aa8.27□□□□□ -1.09
CDHR3-213ENST00000488386 ZNF784Q8NCA9 323 aaPredicted RBP8.27□□□□□ -1.09
CDHR3-213ENST00000488386 DACH1Q9UI36 760 aa8.27□□□□□ -1.09
CDHR3-213ENST00000488386 USP54Q70EL1 1684 aa8.27□□□□□ -1.09
CDHR3-213ENST00000488386 BAG6P46379 1132 aa8.26□□□□□ -1.09
CDHR3-213ENST00000488386 SMCPP49901 116 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-213ENST00000488386 PTF1AQ7RTS3 328 aa8.26□□□□□ -1.09
CDHR3-213ENST00000488386 KCNH5Q8NCM2 988 aa8.26□□□□□ -1.09
CDHR3-213ENST00000488386 CCER1Q8TC90 406 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-213ENST00000488386 LTV1Q96GA3 475 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-213ENST00000488386 POLR3GLQ9BT43 218 aa8.26□□□□□ -1.09
CDHR3-213ENST00000488386 CDCA7Q9BWT1 371 aaPredicted RBP8.26□□□□□ -1.09
CDHR3-213ENST00000488386 EDC4Q6P2E9 1401 aaKnown RBP8.26□□□□□ -1.09
CDHR3-213ENST00000488386 WDR17Q8IZU2 1322 aa8.26□□□□□ -1.09
CDHR3-213ENST00000488386 USP31Q70CQ4 1352 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 CAPN5O15484 640 aaPredicted RBP8.25□□□□□ -1.09
CDHR3-213ENST00000488386 LILRA1O75019 489 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 BMP1P13497 986 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 SCTRP47872 440 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 CBLBQ13191 982 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 CTC1Q2NKJ3 1217 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 RNF135Q8IUD6 432 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 ZNF592Q92610 1267 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 GGNBP2Q9H3C7 697 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 CYLDQ9NQC7 956 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 TERF2IPQ9NYB0 399 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 PCDHB11Q9Y5F2 797 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 EMILIN1Q9Y6C2 1016 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 OVOS2A0A0J9YW53 1432 aa8.25□□□□□ -1.09
CDHR3-213ENST00000488386 OVOS2Q6IE36 1432 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms