RNA–Protein interactions for RNA: ENST00000488325.5

HLA-DOB-209, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,188 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-209ENST00000488325 FMNL2Q96PY5 1086 aa15.23■□□□□ 0.03
HLA-DOB-209ENST00000488325 TRPM7Q96QT4 1865 aa15.23■□□□□ 0.03
HLA-DOB-209ENST00000488325 ARFGEF2Q9Y6D5 1785 aa15.22■□□□□ 0.03
HLA-DOB-209ENST00000488325 SRGNP10124 158 aa15.22■□□□□ 0.03
HLA-DOB-209ENST00000488325 FKBP4Q02790 459 aaKnown RBP eCLIP15.22■□□□□ 0.03
HLA-DOB-209ENST00000488325 CIAPIN1Q6FI81 312 aa15.22■□□□□ 0.03
HLA-DOB-209ENST00000488325 ITPRIPQ8IWB1 547 aa15.22■□□□□ 0.03
HLA-DOB-209ENST00000488325 TNNQ9UQP3 1299 aa15.22■□□□□ 0.03
HLA-DOB-209ENST00000488325 CACNA1FO60840 1977 aa15.22■□□□□ 0.03
HLA-DOB-209ENST00000488325 ABCC4O15439 1325 aa15.21■□□□□ 0.03
HLA-DOB-209ENST00000488325 FZD9O00144 591 aa15.21■□□□□ 0.03
HLA-DOB-209ENST00000488325 EIF2S2P20042 333 aaKnown RBP15.21■□□□□ 0.03
HLA-DOB-209ENST00000488325 SLC39A6Q13433 755 aa15.21■□□□□ 0.03
HLA-DOB-209ENST00000488325 GPC2Q8N158 579 aa15.21■□□□□ 0.03
HLA-DOB-209ENST00000488325 TMEM57Q8N5G2 664 aa15.21■□□□□ 0.03
HLA-DOB-209ENST00000488325 C7orf43Q8WVR3 580 aa15.21■□□□□ 0.03
HLA-DOB-209ENST00000488325 GCC1Q96CN9 775 aa15.21■□□□□ 0.03
HLA-DOB-209ENST00000488325 SNRPA1P09661 255 aaKnown RBP15.2■□□□□ 0.02
HLA-DOB-209ENST00000488325 SAPCD2Q86UD0 394 aa15.2■□□□□ 0.02
HLA-DOB-209ENST00000488325 MASTLQ96GX5 879 aa15.2■□□□□ 0.02
HLA-DOB-209ENST00000488325 FLIIQ13045 1269 aa15.19■□□□□ 0.02
HLA-DOB-209ENST00000488325 NECTIN2Q92692 538 aa15.19■□□□□ 0.02
HLA-DOB-209ENST00000488325 DBF4Q9UBU7 674 aaPredicted RBP15.19■□□□□ 0.02
HLA-DOB-209ENST00000488325 LMOD1P29536 600 aaPredicted RBP15.18■□□□□ 0.02
HLA-DOB-209ENST00000488325 HABP4Q5JVS0 413 aaKnown RBP15.18■□□□□ 0.02
HLA-DOB-209ENST00000488325 CNBD1Q8NA66 436 aa15.18■□□□□ 0.02
HLA-DOB-209ENST00000488325 ZNF496Q96IT1 587 aaPredicted RBP15.18■□□□□ 0.02
HLA-DOB-209ENST00000488325 HHIPL1Q96JK4 782 aa15.18■□□□□ 0.02
HLA-DOB-209ENST00000488325 NPHP1O15259 732 aa15.17■□□□□ 0.02
HLA-DOB-209ENST00000488325 IARSP41252 1262 aaKnown RBP15.17■□□□□ 0.02
HLA-DOB-209ENST00000488325 EPS15P42566 896 aa15.17■□□□□ 0.02
HLA-DOB-209ENST00000488325 FKBP5Q13451 457 aaPredicted RBP15.17■□□□□ 0.02
HLA-DOB-209ENST00000488325 INTS3Q68E01 1043 aaKnown RBP15.17■□□□□ 0.02
HLA-DOB-209ENST00000488325 NBPF15Q8N660 670 aa15.17■□□□□ 0.02
HLA-DOB-209ENST00000488325 GJA3Q9Y6H8 435 aa15.17■□□□□ 0.02
HLA-DOB-209ENST00000488325 CELF2O95319 508 aaKnown RBP15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 CCT4P50991 539 aaKnown RBP15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 EIF5P55010 431 aaKnown RBP15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 ST5P78524 1137 aa15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 OLFM4Q6UX06 510 aa15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 G2E3Q7L622 706 aa15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 ZIC5Q96T25 663 aa15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 HYPKQ9NX55 129 aa15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 CHPF2Q9P2E5 772 aa15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 ERBB4Q15303 1308 aa15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 SCN7AQ01118 1682 aa15.16■□□□□ 0.02
HLA-DOB-209ENST00000488325 A0A087WZG4 1122 aa15.15■□□□□ 0.02
HLA-DOB-209ENST00000488325 SCNN1DP51172 638 aa15.15■□□□□ 0.02
HLA-DOB-209ENST00000488325 USP50Q70EL3 339 aaPredicted RBP15.15■□□□□ 0.02
HLA-DOB-209ENST00000488325 CENPQQ7L2Z9 268 aaPredicted RBP15.15■□□□□ 0.02
HLA-DOB-209ENST00000488325 RTKN2Q8IZC4 609 aa15.15■□□□□ 0.02
HLA-DOB-209ENST00000488325 UBR2Q8IWV8 1755 aa15.14■□□□□ 0.01
HLA-DOB-209ENST00000488325 NOGQ13253 232 aa15.14■□□□□ 0.01
HLA-DOB-209ENST00000488325 SYNE4Q8N205 404 aa15.14■□□□□ 0.01
HLA-DOB-209ENST00000488325 TEX13AQ9BXU3 409 aaPredicted RBP15.14■□□□□ 0.01
HLA-DOB-209ENST00000488325 LAMB4A4D0S4 1761 aa15.13■□□□□ 0.01
HLA-DOB-209ENST00000488325 DDX58O95786 925 aaKnown RBP15.13■□□□□ 0.01
HLA-DOB-209ENST00000488325 EIF6P56537 245 aaKnown RBP15.13■□□□□ 0.01
HLA-DOB-209ENST00000488325 VSIG10Q8N0Z9 540 aa15.13■□□□□ 0.01
HLA-DOB-209ENST00000488325 JDP2Q8WYK2 163 aa15.13■□□□□ 0.01
HLA-DOB-209ENST00000488325 SETDB2Q96T68 719 aa15.13■□□□□ 0.01
HLA-DOB-209ENST00000488325 ZBTB40Q9NUA8 1239 aa15.13■□□□□ 0.01
HLA-DOB-209ENST00000488325 TBC1D2BQ9UPU7 963 aa15.13■□□□□ 0.01
HLA-DOB-209ENST00000488325 BCORQ6W2J9 1755 aa15.13■□□□□ 0.01
HLA-DOB-209ENST00000488325 PRAMEF22A3QJZ6 481 aa15.12■□□□□ 0.01
HLA-DOB-209ENST00000488325 NPR1P16066 1061 aa15.12■□□□□ 0.01
HLA-DOB-209ENST00000488325 RWDD1Q9H446 243 aaPredicted RBP15.12■□□□□ 0.01
HLA-DOB-209ENST00000488325 ZBTB7BO15156 539 aaPredicted RBP15.11■□□□□ 0.01
HLA-DOB-209ENST00000488325 SLC4A10Q6U841 1118 aa15.11■□□□□ 0.01
HLA-DOB-209ENST00000488325 PHAXQ9H814 394 aaKnown RBP15.11■□□□□ 0.01
HLA-DOB-209ENST00000488325 ZNF408Q9H9D4 720 aa15.11■□□□□ 0.01
HLA-DOB-209ENST00000488325 USP16Q9Y5T5 823 aa15.11■□□□□ 0.01
HLA-DOB-209ENST00000488325 COL4A5P29400 1685 aa15.11■□□□□ 0.01
HLA-DOB-209ENST00000488325 F6X3S4 739 aa15.1■□□□□ 0.01
HLA-DOB-209ENST00000488325 CTU1Q7Z7A3 348 aaKnown RBP15.1■□□□□ 0.01
HLA-DOB-209ENST00000488325 DNAAF4Q8WXU2 420 aa15.1■□□□□ 0.01
HLA-DOB-209ENST00000488325 GLIS2Q9BZE0 524 aaPredicted RBP15.1■□□□□ 0.01
HLA-DOB-209ENST00000488325 SAGE1Q9NXZ1 904 aa15.1■□□□□ 0.01
HLA-DOB-209ENST00000488325 ZNF330Q9Y3S2 320 aaPredicted RBP15.1■□□□□ 0.01
HLA-DOB-209ENST00000488325 STARD3NLO95772 234 aa15.09■□□□□ 0.01
HLA-DOB-209ENST00000488325 ANXA1P04083 346 aa15.09■□□□□ 0.01
HLA-DOB-209ENST00000488325 PDIA6Q15084 440 aa15.09■□□□□ 0.01
HLA-DOB-209ENST00000488325 HPS5Q9UPZ3 1129 aa15.09■□□□□ 0.01
HLA-DOB-209ENST00000488325 PCDHB15Q9Y5E8 787 aa15.09■□□□□ 0.01
HLA-DOB-209ENST00000488325 PROSER3Q2NL68 480 aa15.08■□□□□ 0
HLA-DOB-209ENST00000488325 KSR2Q6VAB6 950 aa15.08■□□□□ 0
HLA-DOB-209ENST00000488325 PSMD1Q99460 953 aa15.08■□□□□ 0
HLA-DOB-209ENST00000488325 SNED1Q8TER0 1413 aa15.08■□□□□ 0
HLA-DOB-209ENST00000488325 KLRG2A4D1S0 409 aaPredicted RBP15.07■□□□□ 0
HLA-DOB-209ENST00000488325 PI4KAP2A4QPH2 592 aa15.07■□□□□ 0
HLA-DOB-209ENST00000488325 TRPA1O75762 1119 aa15.07■□□□□ 0
HLA-DOB-209ENST00000488325 GNAI3P08754 354 aa15.07■□□□□ 0
HLA-DOB-209ENST00000488325 FXR1P51114 621 aaKnown RBP eCLIP15.07■□□□□ 0
HLA-DOB-209ENST00000488325 HDAC1Q13547 482 aaPredicted RBP15.07■□□□□ 0
HLA-DOB-209ENST00000488325 PI4KAP1Q8N8J0 262 aa15.07■□□□□ 0
HLA-DOB-209ENST00000488325 SRCIN1Q9C0H9 1055 aa15.07■□□□□ 0
HLA-DOB-209ENST00000488325 ADARB2Q9NS39 739 aaKnown RBP15.07■□□□□ 0
HLA-DOB-209ENST00000488325 CAMTA2O94983 1202 aa15.06■□□□□ 0
HLA-DOB-209ENST00000488325 MYL6BP14649 208 aa15.06■□□□□ 0
HLA-DOB-209ENST00000488325 HUNKP57058 714 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms