RNA–Protein interactions for RNA: ENST00000488127.1

LDLRAP1-207, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 2

Gene LDLRAP1, Length 4,670 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-207ENST00000488127 ERBB3P21860 1342 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 CYP7A1P22680 504 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 TTF1Q15361 905 aaPredicted RBP13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 SLC9C2Q5TAH2 1124 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 TNMDQ9H2S6 317 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 UQCRFS1P1P0C7P4 283 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 CCT2P78371 535 aaKnown RBP13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 FILIP1Q7Z7B0 1213 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 ERVV-2B6SEH9 535 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 IFIT3O14879 490 aaKnown RBP13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 LDHCP07864 332 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 SSFA2P28290 1259 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 ME1P48163 572 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 GUCY1B3Q02153 619 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 CARD10Q9BWT7 1032 aa13.63□□□□□ -0.23
LDLRAP1-207ENST00000488127 TTLL7Q6ZT98 887 aa13.62□□□□□ -0.23
LDLRAP1-207ENST00000488127 CCDC144CPQ8IYA2 1237 aa13.62□□□□□ -0.23
LDLRAP1-207ENST00000488127 TRERF1Q96PN7 1200 aa13.62□□□□□ -0.23
LDLRAP1-207ENST00000488127 DCTPP1Q9H773 170 aa13.62□□□□□ -0.23
LDLRAP1-207ENST00000488127 POLD1P28340 1107 aa13.62□□□□□ -0.23
LDLRAP1-207ENST00000488127 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
LDLRAP1-207ENST00000488127 TSPYL1Q9H0U9 437 aa13.62□□□□□ -0.23
LDLRAP1-207ENST00000488127 KDM5AP29375 1690 aaKnown RBP13.62□□□□□ -0.23
LDLRAP1-207ENST00000488127 AXDND1Q5T1B0 1012 aaPredicted RBP13.62□□□□□ -0.23
LDLRAP1-207ENST00000488127 HOXB7P09629 217 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 ITGA6P23229 1130 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 MSL1Q68DK7 614 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 OLFM4Q6UX06 510 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 ZNF287Q9HBT7 754 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 BABAM1Q9NWV8 329 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 TRPC5Q9UL62 973 aaPredicted RBP13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 CLTCL1P53675 1640 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 BAG3O95817 575 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 ZSCAN31Q96LW9 406 aaPredicted RBP13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 SLF2Q8IX21 1173 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 LRRC2Q9BYS8 371 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 WDR17Q8IZU2 1322 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 DYNC1I1O14576 645 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 CCP110O43303 1012 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 CALRP27797 417 aaKnown RBP13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 FAM177A1Q8N128 213 aaPredicted RBP13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 AXIN2Q9Y2T1 843 aa13.61□□□□□ -0.23
LDLRAP1-207ENST00000488127 CDKL5O76039 1030 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 TRIM37O94972 964 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 RBM26Q5T8P6 1007 aaKnown RBP13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 PRAMEF22A3QJZ6 481 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 KRT85P78386 507 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 PPP4R3BQ5MIZ7 849 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 CCDC191Q8NCU4 936 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 SUCLG2Q96I99 432 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 CDK5RAP3Q96JB5 506 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 ZNF396Q96N95 335 aaPredicted RBP13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 CCDC96Q2M329 555 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 MIGA1Q8NAN2 632 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 KDM5CP41229 1560 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 SOS1Q07889 1333 aaPredicted RBP13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 SPATA31A3Q5VYP0 1347 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 IGSF1Q8N6C5 1336 aa13.6□□□□□ -0.23
LDLRAP1-207ENST00000488127 PNMA6EA0A0J9YXQ4 647 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 TSPY2A6NKD2 308 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 SPDYE4A6NLX3 237 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 TAF5LO75529 589 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 PICALMQ13492 652 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 GCKRQ14397 625 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 NAA16Q6N069 864 aaPredicted RBP13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 IQGAP3Q86VI3 1631 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 SHROOM2Q13796 1616 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 RNF17Q9BXT8 1623 aaKnown RBP13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 SPTY2D1Q68D10 685 aaPredicted RBP13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 CTCFLQ8NI51 663 aaPredicted RBP13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 CAGE1Q8TC20 777 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 PLEKHF1Q96S99 279 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 STX8Q9UNK0 236 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 LOC102724428A0A0B4J2F2 783 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 SIK1P57059 783 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 MICU3Q86XE3 530 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 USP25Q9UHP3 1055 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 AATKQ6ZMQ8 1374 aa13.59□□□□□ -0.23
LDLRAP1-207ENST00000488127 CDR1P51861 262 aa13.58□□□□□ -0.23
LDLRAP1-207ENST00000488127 WDR78Q5VTH9 848 aa13.58□□□□□ -0.23
LDLRAP1-207ENST00000488127 PAXIP1Q6ZW49 1069 aaPredicted RBP13.58□□□□□ -0.23
LDLRAP1-207ENST00000488127 UBXN4Q92575 508 aa13.58□□□□□ -0.23
LDLRAP1-207ENST00000488127 ADGRL3Q9HAR2 1447 aa13.58□□□□□ -0.23
LDLRAP1-207ENST00000488127 SLC12A7Q9Y666 1083 aa13.58□□□□□ -0.23
LDLRAP1-207ENST00000488127 ATP7BP35670 1465 aa13.58□□□□□ -0.23
LDLRAP1-207ENST00000488127 SETD1BQ9UPS6 1966 aaKnown RBP13.58□□□□□ -0.23
LDLRAP1-207ENST00000488127 GOLGA8BA8MQT2 603 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 PROSER3Q2NL68 480 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 PARP10Q53GL7 1025 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 ZHX3Q9H4I2 956 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 VAT1LQ9HCJ6 419 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 PAG1Q9NWQ8 432 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 RNF41Q9H4P4 317 aaPredicted RBP13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 OGFOD1Q8N543 542 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 DEF6Q9H4E7 631 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 NDUFB9Q9Y6M9 179 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 SLC4A4Q9Y6R1 1079 aa13.58□□□□□ -0.24
LDLRAP1-207ENST00000488127 EYA2O00167 538 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms