RNA–Protein interactions for RNA: ENST00000487932.5

PKD1-220, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 6,464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-220ENST00000487932 NCOA7Q8NI08 942 aa17.53■□□□□ 0.4
PKD1-220ENST00000487932 CCDC117Q8IWD4 279 aaPredicted RBP17.53■□□□□ 0.4
PKD1-220ENST00000487932 IMPG2Q9BZV3 1241 aa17.53■□□□□ 0.4
PKD1-220ENST00000487932 PLCB3Q01970 1234 aa17.53■□□□□ 0.4
PKD1-220ENST00000487932 WTAPQ15007 396 aa17.53■□□□□ 0.4
PKD1-220ENST00000487932 SPECC1LQ69YQ0 1117 aa17.53■□□□□ 0.4
PKD1-220ENST00000487932 NCOA2Q15596 1464 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 FAM13AO94988 1023 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 PKD2L1Q9P0L9 805 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 DBF4Q9UBU7 674 aaPredicted RBP17.52■□□□□ 0.4
PKD1-220ENST00000487932 USP25Q9UHP3 1055 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 AMOTL2Q9Y2J4 779 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 SPAG5Q96R06 1193 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 LIMCH1Q9UPQ0 1083 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 JAG2Q9Y219 1238 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 UBAP1LF5GYI3 381 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 SLU7O95391 586 aaKnown RBP17.52■□□□□ 0.4
PKD1-220ENST00000487932 ANXA1P04083 346 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 POLD1P28340 1107 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 EVI5LQ96CN4 794 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 LRRC2Q9BYS8 371 aa17.52■□□□□ 0.4
PKD1-220ENST00000487932 CFAP58Q5T655 872 aa17.52■□□□□ 0.39
PKD1-220ENST00000487932 CCDC155Q8N6L0 562 aa17.52■□□□□ 0.39
PKD1-220ENST00000487932 IPO4Q8TEX9 1081 aaKnown RBP17.52■□□□□ 0.39
PKD1-220ENST00000487932 SMARCA4P51532 1647 aa17.52■□□□□ 0.39
PKD1-220ENST00000487932 N4BP3O15049 544 aa17.52■□□□□ 0.39
PKD1-220ENST00000487932 PTGS1P23219 599 aa17.51■□□□□ 0.39
PKD1-220ENST00000487932 LRRC27Q9C0I9 530 aa17.51■□□□□ 0.39
PKD1-220ENST00000487932 BBXQ8WY36 941 aaPredicted RBP17.51■□□□□ 0.39
PKD1-220ENST00000487932 CCDC160A6NGH7 325 aa17.51■□□□□ 0.39
PKD1-220ENST00000487932 KIF2AO00139 706 aaPredicted RBP17.51■□□□□ 0.39
PKD1-220ENST00000487932 AKR1B10O60218 316 aa17.51■□□□□ 0.39
PKD1-220ENST00000487932 CCDC172P0C7W6 258 aa17.51■□□□□ 0.39
PKD1-220ENST00000487932 NAPAP54920 295 aa17.51■□□□□ 0.39
PKD1-220ENST00000487932 HSF2BPO75031 334 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 TPD52P55327 224 aaPredicted RBP17.5■□□□□ 0.39
PKD1-220ENST00000487932 SNX16P57768 344 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 CTAGE5O15320 804 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 STX1AQ16623 288 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 IFI16Q16666 785 aaKnown RBP17.5■□□□□ 0.39
PKD1-220ENST00000487932 LMOD1P29536 600 aaPredicted RBP17.5■□□□□ 0.39
PKD1-220ENST00000487932 TFCP2L1Q9NZI6 479 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 PDIA4P13667 645 aaKnown RBP17.5■□□□□ 0.39
PKD1-220ENST00000487932 MAP7D1Q3KQU3 841 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 USP37Q86T82 979 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 IFNL2Q8IZJ0 200 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 EP400NLQ6ZTU2 488 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 CFAP57Q96MR6 1250 aa17.5■□□□□ 0.39
PKD1-220ENST00000487932 BIRC2Q13490 618 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 CCDC6Q16204 474 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 NEK1Q96PY6 1258 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 HAUS7Q99871 368 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 BACH2Q9BYV9 841 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 SMIM23A6NLE4 172 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 HARSP12081 509 aaKnown RBP17.49■□□□□ 0.39
PKD1-220ENST00000487932 SSFA2P28290 1259 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 C9orf84Q5VXU9 1444 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 GTF2F1P35269 517 aaKnown RBP eCLIP17.49■□□□□ 0.393e-8■■■■■ 34.4
PKD1-220ENST00000487932 RASA3Q14644 834 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 NOD1Q9Y239 953 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 TEX13AQ9BXU3 409 aaPredicted RBP17.49■□□□□ 0.39
PKD1-220ENST00000487932 PARP3Q9Y6F1 533 aa17.49■□□□□ 0.39
PKD1-220ENST00000487932 CKAP4Q07065 602 aaKnown RBP17.49■□□□□ 0.39
PKD1-220ENST00000487932 JDP2Q8WYK2 163 aa17.48■□□□□ 0.39
PKD1-220ENST00000487932 KLF18A0A0U1RQI7 1052 aa17.48■□□□□ 0.39
PKD1-220ENST00000487932 SKAP1Q86WV1 359 aa17.48■□□□□ 0.39
PKD1-220ENST00000487932 GPATCH11Q8N954 259 aa17.48■□□□□ 0.39
PKD1-220ENST00000487932 CCDC102BQ68D86 513 aa17.48■□□□□ 0.39
PKD1-220ENST00000487932 SSH1Q8WYL5 1049 aa17.48■□□□□ 0.39
PKD1-220ENST00000487932 ANKRD24Q8TF21 1146 aa17.48■□□□□ 0.39
PKD1-220ENST00000487932 TTC12Q9H892 705 aaPredicted RBP17.48■□□□□ 0.39
PKD1-220ENST00000487932 C6orf50Q9HD87 102 aa17.47■□□□□ 0.39
PKD1-220ENST00000487932 ESPNB1AK53 854 aa17.47■□□□□ 0.39
PKD1-220ENST00000487932 BACH1O14867 736 aa17.47■□□□□ 0.39
PKD1-220ENST00000487932 SMC1BQ8NDV3 1235 aa17.47■□□□□ 0.39
PKD1-220ENST00000487932 CIZ1Q9ULV3 898 aaPredicted RBP17.47■□□□□ 0.39
PKD1-220ENST00000487932 PLVAPQ9BX97 442 aa17.47■□□□□ 0.39
PKD1-220ENST00000487932 NBPF7P0C2Y1 421 aaPredicted RBP17.47■□□□□ 0.39
PKD1-220ENST00000487932 ASIC1P78348 528 aa17.47■□□□□ 0.39
PKD1-220ENST00000487932 ZNF804AQ7Z570 1209 aa17.47■□□□□ 0.39
PKD1-220ENST00000487932 NIP7Q9Y221 180 aaKnown RBP eCLIP17.47■□□□□ 0.39
PKD1-220ENST00000487932 SPDYE3A6NKU9 549 aa17.47■□□□□ 0.39
PKD1-220ENST00000487932 NAA16Q6N069 864 aaPredicted RBP17.47■□□□□ 0.39
PKD1-220ENST00000487932 FLIIQ13045 1269 aa17.46■□□□□ 0.39
PKD1-220ENST00000487932 SNW1Q13573 536 aaKnown RBP17.46■□□□□ 0.39
PKD1-220ENST00000487932 RNF34Q969K3 372 aa17.46■□□□□ 0.39
PKD1-220ENST00000487932 KIF4AO95239 1232 aa17.46■□□□□ 0.39
PKD1-220ENST00000487932 GNG11P61952 73 aa17.46■□□□□ 0.39
PKD1-220ENST00000487932 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.46■□□□□ 0.39
PKD1-220ENST00000487932 KANK3Q6NY19 840 aa17.46■□□□□ 0.39
PKD1-220ENST00000487932 NECAB1Q8N987 351 aa17.46■□□□□ 0.39
PKD1-220ENST00000487932 PFDN4Q9NQP4 134 aa17.46■□□□□ 0.39
PKD1-220ENST00000487932 RMND1Q9NWS8 449 aa17.46■□□□□ 0.39
PKD1-220ENST00000487932 FAM169AQ9Y6X4 670 aa17.46■□□□□ 0.39
PKD1-220ENST00000487932 LRPPRCP42704 1394 aaKnown RBP17.46■□□□□ 0.38
PKD1-220ENST00000487932 NLRP3Q96P20 1036 aa17.45■□□□□ 0.38
PKD1-220ENST00000487932 PLIN2Q99541 437 aa17.45■□□□□ 0.38
PKD1-220ENST00000487932 SELENOSQ9BQE4 189 aa17.45■□□□□ 0.38
PKD1-220ENST00000487932 TXNDC16Q9P2K2 825 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 255.7 ms