RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PLA2G4EQ3MJ16 856 aa8.77□□□□□ -1.01
BRCA1-217ENST00000487825 C14orf37Q86TY3 774 aa8.77□□□□□ -1.01
BRCA1-217ENST00000487825 MDFIQ99750 246 aa8.77□□□□□ -1.01
BRCA1-217ENST00000487825 LRFN2Q9ULH4 789 aa8.77□□□□□ -1.01
BRCA1-217ENST00000487825 ADH7P40394 386 aa8.76□□□□□ -1.01
BRCA1-217ENST00000487825 CCDC82Q8N4S0 544 aa8.76□□□□□ -1.01
BRCA1-217ENST00000487825 TNFRSF25Q93038 417 aa8.76□□□□□ -1.01
BRCA1-217ENST00000487825 MYO19Q96H55 970 aa8.76□□□□□ -1.01
BRCA1-217ENST00000487825 MKNK1Q9BUB5 465 aa8.76□□□□□ -1.01
BRCA1-217ENST00000487825 DIP2BQ9P265 1576 aa8.76□□□□□ -1.01
BRCA1-217ENST00000487825 RAD54L2Q9Y4B4 1467 aa8.76□□□□□ -1.01
BRCA1-217ENST00000487825 PIK3R2O00459 728 aa8.75□□□□□ -1.01
BRCA1-217ENST00000487825 MICAL2O94851 1124 aa8.75□□□□□ -1.01
BRCA1-217ENST00000487825 GRNP28799 593 aaKnown RBP8.75□□□□□ -1.01
BRCA1-217ENST00000487825 INPP5BP32019 993 aa8.75□□□□□ -1.01
BRCA1-217ENST00000487825 COX20Q5RI15 118 aa8.75□□□□□ -1.01
BRCA1-217ENST00000487825 CAPN12Q6ZSI9 719 aa8.75□□□□□ -1.01
BRCA1-217ENST00000487825 IFT43Q96FT9 208 aa8.75□□□□□ -1.01
BRCA1-217ENST00000487825 PNMA5Q96PV4 448 aa8.75□□□□□ -1.01
BRCA1-217ENST00000487825 GSX2Q9BZM3 304 aa8.75□□□□□ -1.01
BRCA1-217ENST00000487825 TSPOAP1O95153 1857 aa8.74□□□□□ -1.01
BRCA1-217ENST00000487825 SHROOM2Q13796 1616 aa8.74□□□□□ -1.01
BRCA1-217ENST00000487825 KRBA1A5PL33 1030 aa8.74□□□□□ -1.01
BRCA1-217ENST00000487825 EPB42P16452 691 aa8.74□□□□□ -1.01
BRCA1-217ENST00000487825 CCINQ13939 588 aa8.74□□□□□ -1.01
BRCA1-217ENST00000487825 UBE2OQ9C0C9 1292 aaKnown RBP8.74□□□□□ -1.01
BRCA1-217ENST00000487825 SAP130Q9H0E3 1048 aa8.74□□□□□ -1.01
BRCA1-217ENST00000487825 USP20Q9Y2K6 914 aa8.74□□□□□ -1.01
BRCA1-217ENST00000487825 STARD13Q9Y3M8 1113 aa8.74□□□□□ -1.01
BRCA1-217ENST00000487825 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.74□□□□□ -1.01
BRCA1-217ENST00000487825 TDRD9Q8NDG6 1382 aaKnown RBP8.73□□□□□ -1.01
BRCA1-217ENST00000487825 CEP170Q5SW79 1584 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 GRIN2BQ13224 1484 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 M0R082 166 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 ITGB2P05107 769 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 NFKB1P19838 968 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 ARSDP51689 593 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 C8orf86Q6ZUL3 223 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 KRT25Q7Z3Z0 450 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 ZNF417Q8TAU3 575 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 FBXO41Q8TF61 875 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 TRIM11Q96F44 468 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 ZNF587Q96SQ5 575 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-217ENST00000487825 C1orf115Q9H7X2 142 aa8.73□□□□□ -1.01
BRCA1-217ENST00000487825 CXXC1Q9P0U4 656 aaPredicted RBP8.73□□□□□ -1.01
BRCA1-217ENST00000487825 ADGRL1O94910 1474 aa8.72□□□□□ -1.01
BRCA1-217ENST00000487825 ABCC10Q5T3U5 1492 aa8.72□□□□□ -1.01
BRCA1-217ENST00000487825 ALBP02768 609 aa8.72□□□□□ -1.01
BRCA1-217ENST00000487825 NAA30Q147X3 362 aaPredicted RBP8.72□□□□□ -1.01
BRCA1-217ENST00000487825 TREML1Q86YW5 311 aa8.72□□□□□ -1.01
BRCA1-217ENST00000487825 PLVAPQ9BX97 442 aa8.72□□□□□ -1.01
BRCA1-217ENST00000487825 NOP53Q9NZM5 478 aaKnown RBP8.72□□□□□ -1.01
BRCA1-217ENST00000487825 MAPKBP1O60336 1514 aa8.71□□□□□ -1.01
BRCA1-217ENST00000487825 OPLAHO14841 1288 aa8.71□□□□□ -1.02
BRCA1-217ENST00000487825 IGHA1P01876 353 aa8.71□□□□□ -1.02
BRCA1-217ENST00000487825 C16orf46Q6P387 395 aa8.71□□□□□ -1.02
BRCA1-217ENST00000487825 MICALL1Q8N3F8 863 aa8.71□□□□□ -1.02
BRCA1-217ENST00000487825 CLP1Q92989 425 aaKnown RBP8.71□□□□□ -1.02
BRCA1-217ENST00000487825 DNAJB12Q9NXW2 375 aaKnown RBP8.71□□□□□ -1.02
BRCA1-217ENST00000487825 RTCBQ9Y3I0 505 aaKnown RBP8.71□□□□□ -1.02
BRCA1-217ENST00000487825 SOGA1O94964 1423 aa8.71□□□□□ -1.02
BRCA1-217ENST00000487825 LMTK3Q96Q04 1460 aa8.7□□□□□ -1.02
BRCA1-217ENST00000487825 MSTNO14793 375 aa8.7□□□□□ -1.02
BRCA1-217ENST00000487825 SASH3O75995 380 aa8.7□□□□□ -1.02
BRCA1-217ENST00000487825 TARSP26639 723 aaKnown RBP8.7□□□□□ -1.02
BRCA1-217ENST00000487825 ALYREFQ86V81 257 aaKnown RBP8.7□□□□□ -1.02
BRCA1-217ENST00000487825 RGL4Q8IZJ4 473 aa8.7□□□□□ -1.02
BRCA1-217ENST00000487825 SPOCK3Q9BQ16 436 aa8.7□□□□□ -1.02
BRCA1-217ENST00000487825 SLAIN2Q9P270 581 aa8.7□□□□□ -1.02
BRCA1-217ENST00000487825 SLC6A14Q9UN76 642 aa8.7□□□□□ -1.02
BRCA1-217ENST00000487825 LOC100996750A0A140TA64 210 aa8.69□□□□□ -1.02
BRCA1-217ENST00000487825 CMTR1Q8N1G2 835 aaKnown RBP8.69□□□□□ -1.02
BRCA1-217ENST00000487825 KRTAP4-6Q9BYQ5 205 aa8.69□□□□□ -1.02
BRCA1-217ENST00000487825 EFCC1Q9HA90 598 aa8.69□□□□□ -1.02
BRCA1-217ENST00000487825 ZFATQ9P243 1243 aa8.69□□□□□ -1.02
BRCA1-217ENST00000487825 CCDC88BA6NC98 1476 aa8.69□□□□□ -1.02
BRCA1-217ENST00000487825 ATP2B4P23634 1241 aa8.68□□□□□ -1.02
BRCA1-217ENST00000487825 FAM26DQ5JW98 314 aa8.68□□□□□ -1.02
BRCA1-217ENST00000487825 ETFBKMTQ8IXQ9 262 aa8.68□□□□□ -1.02
BRCA1-217ENST00000487825 NUDT8Q8WV74 236 aa8.68□□□□□ -1.02
BRCA1-217ENST00000487825 FGD5Q6ZNL6 1462 aa8.68□□□□□ -1.02
BRCA1-217ENST00000487825 BRD2P25440 801 aaKnown RBP8.67□□□□□ -1.02
BRCA1-217ENST00000487825 C20orf204Q6ZNR8 217 aa8.67□□□□□ -1.02
BRCA1-217ENST00000487825 COL26A1Q96A83 441 aa8.67□□□□□ -1.02
BRCA1-217ENST00000487825 ABCA5Q8WWZ7 1642 aa8.66□□□□□ -1.02
BRCA1-217ENST00000487825 PTCD1O75127 700 aaKnown RBP8.66□□□□□ -1.02
BRCA1-217ENST00000487825 XYLBO75191 536 aa8.66□□□□□ -1.02
BRCA1-217ENST00000487825 PROCP04070 461 aa8.66□□□□□ -1.02
BRCA1-217ENST00000487825 RARAP10276 462 aa8.66□□□□□ -1.02
BRCA1-217ENST00000487825 MLLT1Q03111 559 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-217ENST00000487825 COL9A3Q14050 684 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-217ENST00000487825 JPH1Q9HDC5 661 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-217ENST00000487825 NAGPAQ9UK23 515 aa8.66□□□□□ -1.02
BRCA1-217ENST00000487825 C1QTNF9BB2RNN3 333 aa8.65□□□□□ -1.02
BRCA1-217ENST00000487825 FAM229AH3BQW9 127 aa8.65□□□□□ -1.02
BRCA1-217ENST00000487825 TNFRSF10BO14763 440 aa8.65□□□□□ -1.02
BRCA1-217ENST00000487825 LILRB5O75023 590 aa8.65□□□□□ -1.02
BRCA1-217ENST00000487825 MAP3K6O95382 1288 aa8.65□□□□□ -1.02
BRCA1-217ENST00000487825 CPB1P15086 417 aa8.65□□□□□ -1.02
BRCA1-217ENST00000487825 PSAPL1Q6NUJ1 521 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms