RNA–Protein interactions for RNA: ENST00000485967.1

SCAP-211, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 508 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-211ENST00000485967 ANKRD31Q8N7Z5 1873 aa17.42■□□□□ 0.38
SCAP-211ENST00000485967 ALDH1B1P30837 517 aa17.42■□□□□ 0.38
SCAP-211ENST00000485967 APLP1P51693 650 aa17.42■□□□□ 0.38
SCAP-211ENST00000485967 IFFO2Q5TF58 517 aa17.42■□□□□ 0.38
SCAP-211ENST00000485967 INTS3Q68E01 1043 aaKnown RBP17.42■□□□□ 0.38
SCAP-211ENST00000485967 C3orf67Q6ZVT6 689 aa17.42■□□□□ 0.38
SCAP-211ENST00000485967 DDX46Q7L014 1031 aaKnown RBP17.42■□□□□ 0.38
SCAP-211ENST00000485967 RNF181Q9P0P0 153 aa17.42■□□□□ 0.38
SCAP-211ENST00000485967 TNNQ9UQP3 1299 aa17.42■□□□□ 0.38
SCAP-211ENST00000485967 ABCC4O15439 1325 aa17.42■□□□□ 0.38
SCAP-211ENST00000485967 COL11A2P13942 1736 aaPredicted RBP17.41■□□□□ 0.38
SCAP-211ENST00000485967 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
SCAP-211ENST00000485967 RIC1Q4ADV7 1423 aa17.41■□□□□ 0.38
SCAP-211ENST00000485967 PLIN1O60240 522 aa17.41■□□□□ 0.38
SCAP-211ENST00000485967 CRY2Q49AN0 593 aa17.41■□□□□ 0.38
SCAP-211ENST00000485967 SF3B3Q15393 1217 aaKnown RBP17.4■□□□□ 0.38
SCAP-211ENST00000485967 CCDC152Q4G0S7 254 aa17.4■□□□□ 0.38
SCAP-211ENST00000485967 TMEM57Q8N5G2 664 aa17.4■□□□□ 0.38
SCAP-211ENST00000485967 RBM46Q8TBY0 533 aaKnown RBP17.4■□□□□ 0.38
SCAP-211ENST00000485967 HDAC5Q9UQL6 1122 aa17.4■□□□□ 0.38
SCAP-211ENST00000485967 NBPF7P0C2Y1 421 aaPredicted RBP17.39■□□□□ 0.37
SCAP-211ENST00000485967 HOXA10P31260 410 aaPredicted RBP17.39■□□□□ 0.37
SCAP-211ENST00000485967 CASP7P55210 303 aa17.39■□□□□ 0.37
SCAP-211ENST00000485967 CTSWP56202 376 aa17.39■□□□□ 0.37
SCAP-211ENST00000485967 CCDC85AQ96PX6 553 aaPredicted RBP17.39■□□□□ 0.37
SCAP-211ENST00000485967 CRAMP1Q96RY5 1269 aa17.39■□□□□ 0.37
SCAP-211ENST00000485967 USP44Q9H0E7 712 aa17.39■□□□□ 0.37
SCAP-211ENST00000485967 ZNF219Q9P2Y4 722 aaPredicted RBP17.39■□□□□ 0.37
SCAP-211ENST00000485967 KDM2BQ8NHM5 1336 aa17.39■□□□□ 0.37
SCAP-211ENST00000485967 ZC3H4Q9UPT8 1303 aaKnown RBP17.39■□□□□ 0.37
SCAP-211ENST00000485967 UBTFL1P0CB47 393 aaPredicted RBP17.38■□□□□ 0.37
SCAP-211ENST00000485967 RASSF7Q02833 373 aa17.38■□□□□ 0.37
SCAP-211ENST00000485967 ITPRIPQ8IWB1 547 aa17.38■□□□□ 0.37
SCAP-211ENST00000485967 PLA2G12BQ9BX93 195 aa17.38■□□□□ 0.37
SCAP-211ENST00000485967 TMX4Q9H1E5 349 aaPredicted RBP17.38■□□□□ 0.37
SCAP-211ENST00000485967 GNAI3P08754 354 aa17.37■□□□□ 0.37
SCAP-211ENST00000485967 PRPF40BQ6NWY9 871 aaKnown RBP17.37■□□□□ 0.37
SCAP-211ENST00000485967 TTLL11Q8NHH1 800 aa17.37■□□□□ 0.37
SCAP-211ENST00000485967 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
SCAP-211ENST00000485967 CHMP3Q9Y3E7 222 aa17.37■□□□□ 0.37
SCAP-211ENST00000485967 UTYO14607 1347 aa17.37■□□□□ 0.37
SCAP-211ENST00000485967 PRELPP51888 382 aa17.36■□□□□ 0.37
SCAP-211ENST00000485967 DNAJC5GQ8N7S2 189 aa17.36■□□□□ 0.37
SCAP-211ENST00000485967 SUCLG2Q96I99 432 aa17.36■□□□□ 0.37
SCAP-211ENST00000485967 C21orf2O43822 256 aa17.35■□□□□ 0.37
SCAP-211ENST00000485967 BBOX1O75936 387 aa17.35■□□□□ 0.37
SCAP-211ENST00000485967 RLBP1P12271 317 aa17.35■□□□□ 0.37
SCAP-211ENST00000485967 LMNB1P20700 586 aa17.35■□□□□ 0.37
SCAP-211ENST00000485967 FOXO4P98177 505 aa17.35■□□□□ 0.37
SCAP-211ENST00000485967 GRAPQ13588 217 aa17.35■□□□□ 0.37
SCAP-211ENST00000485967 LMBR1LQ6UX01 489 aa17.35■□□□□ 0.37
SCAP-211ENST00000485967 C16orf71Q8IYS4 520 aaPredicted RBP17.35■□□□□ 0.37
SCAP-211ENST00000485967 GRAPLQ8TC17 118 aaPredicted RBP17.35■□□□□ 0.37
SCAP-211ENST00000485967 CCDC88AQ3V6T2 1871 aa17.35■□□□□ 0.37
SCAP-211ENST00000485967 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
SCAP-211ENST00000485967 CSF1RP07333 972 aa17.34■□□□□ 0.37
SCAP-211ENST00000485967 FSTL1Q12841 308 aa17.34■□□□□ 0.37
SCAP-211ENST00000485967 PDE3AQ14432 1141 aa17.34■□□□□ 0.37
SCAP-211ENST00000485967 EPHA10Q5JZY3 1008 aa17.34■□□□□ 0.37
SCAP-211ENST00000485967 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
SCAP-211ENST00000485967 MEIS3Q99687 375 aa17.34■□□□□ 0.37
SCAP-211ENST00000485967 GREM2Q9H772 168 aa17.34■□□□□ 0.37
SCAP-211ENST00000485967 SEC31BQ9NQW1 1179 aa17.34■□□□□ 0.37
SCAP-211ENST00000485967 FER1L6Q2WGJ9 1857 aa17.33■□□□□ 0.37
SCAP-211ENST00000485967 DDX60Q8IY21 1712 aaKnown RBP17.33■□□□□ 0.37
SCAP-211ENST00000485967 ANKRD18BA2A2Z9 1011 aa17.33■□□□□ 0.36
SCAP-211ENST00000485967 NFKBIEO00221 500 aa17.33■□□□□ 0.36
SCAP-211ENST00000485967 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.36
SCAP-211ENST00000485967 RPS8P62241 208 aaKnown RBP17.33■□□□□ 0.36
SCAP-211ENST00000485967 IFIT5Q13325 482 aaKnown RBP17.33■□□□□ 0.36
SCAP-211ENST00000485967 CCDC57Q2TAC2 916 aa17.33■□□□□ 0.36
SCAP-211ENST00000485967 SOGA3Q5TF21 947 aa17.33■□□□□ 0.36
SCAP-211ENST00000485967 ANKRD18AQ8IVF6 992 aa17.33■□□□□ 0.36
SCAP-211ENST00000485967 BICC1Q9H694 974 aaKnown RBP17.33■□□□□ 0.36
SCAP-211ENST00000485967 ITGA6P23229 1130 aa17.32■□□□□ 0.36
SCAP-211ENST00000485967 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
SCAP-211ENST00000485967 TMC4Q7Z404 712 aa17.32■□□□□ 0.36
SCAP-211ENST00000485967 CELF1Q92879 486 aaKnown RBP17.32■□□□□ 0.36
SCAP-211ENST00000485967 CHMP4BQ9H444 224 aaKnown RBP17.32■□□□□ 0.36
SCAP-211ENST00000485967 RRAGCQ9HB90 399 aa17.32■□□□□ 0.36
SCAP-211ENST00000485967 COG6Q9Y2V7 657 aa17.32■□□□□ 0.36
SCAP-211ENST00000485967 DICER1Q9UPY3 1922 aaKnown RBP17.31■□□□□ 0.36
SCAP-211ENST00000485967 GNAI2P04899 355 aa17.31■□□□□ 0.36
SCAP-211ENST00000485967 IGHMBP2P38935 993 aaKnown RBP17.31■□□□□ 0.36
SCAP-211ENST00000485967 MVPQ14764 893 aaKnown RBP17.31■□□□□ 0.36
SCAP-211ENST00000485967 FAM161AQ3B820 660 aa17.31■□□□□ 0.36
SCAP-211ENST00000485967 CC2D2BQ6DHV5 1058 aa17.31■□□□□ 0.36
SCAP-211ENST00000485967 KAZALD1Q96I82 304 aa17.31■□□□□ 0.36
SCAP-211ENST00000485967 DDX19BQ9UMR2 479 aa17.31■□□□□ 0.36
SCAP-211ENST00000485967 LRRFIP2Q9Y608 721 aaKnown RBP17.31■□□□□ 0.36
SCAP-211ENST00000485967 ZBTB7BO15156 539 aaPredicted RBP17.3■□□□□ 0.36
SCAP-211ENST00000485967 HTRA3P83110 453 aa17.3■□□□□ 0.36
SCAP-211ENST00000485967 CCDC93Q567U6 631 aa17.3■□□□□ 0.36
SCAP-211ENST00000485967 C20orf194Q5TEA3 1177 aa17.3■□□□□ 0.36
SCAP-211ENST00000485967 SP8Q8IXZ3 490 aa17.3■□□□□ 0.36
SCAP-211ENST00000485967 C7orf43Q8WVR3 580 aa17.3■□□□□ 0.36
SCAP-211ENST00000485967 MPHOSPH8Q99549 860 aa17.3■□□□□ 0.36
SCAP-211ENST00000485967 ATP6V0A2Q9Y487 856 aa17.3■□□□□ 0.36
SCAP-211ENST00000485967 CACNA1SQ13698 1873 aa17.3■□□□□ 0.36
SCAP-211ENST00000485967 LAMB2P55268 1798 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms