RNA–Protein interactions for RNA: ENST00000485248.2

CAPN13-206, Transcript of calpain 13, humanhuman

TSL 3

Gene CAPN13, Length 710 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN13-206ENST00000485248 GMPSP49915 693 aaPredicted RBP8.65□□□□□ -1.02
CAPN13-206ENST00000485248 TNIP1Q15025 636 aa8.65□□□□□ -1.02
CAPN13-206ENST00000485248 TPTE2Q6XPS3 522 aa8.65□□□□□ -1.02
CAPN13-206ENST00000485248 RASAL3Q86YV0 1011 aa8.65□□□□□ -1.02
CAPN13-206ENST00000485248 SULF1Q8IWU6 871 aa8.65□□□□□ -1.02
CAPN13-206ENST00000485248 TTC5Q8N0Z6 440 aa8.65□□□□□ -1.02
CAPN13-206ENST00000485248 ZFP91Q96JP5 570 aaPredicted RBP8.65□□□□□ -1.02
CAPN13-206ENST00000485248 PGAP2Q9UHJ9 254 aa8.65□□□□□ -1.02
CAPN13-206ENST00000485248 TBC1D2BQ9UPU7 963 aa8.65□□□□□ -1.02
CAPN13-206ENST00000485248 NPC1L1Q9UHC9 1359 aa8.64□□□□□ -1.03
CAPN13-206ENST00000485248 NBPF11Q86T75 865 aa8.64□□□□□ -1.03
CAPN13-206ENST00000485248 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.64□□□□□ -1.03
CAPN13-206ENST00000485248 SUPT20HQ8NEM7 779 aa8.64□□□□□ -1.03
CAPN13-206ENST00000485248 RPGRQ92834 1020 aaKnown RBP8.64□□□□□ -1.03
CAPN13-206ENST00000485248 FAM122AQ96E09 287 aa8.64□□□□□ -1.03
CAPN13-206ENST00000485248 A0A1W2PPC1 479 aa8.63□□□□□ -1.03
CAPN13-206ENST00000485248 COL9A1P20849 921 aa8.63□□□□□ -1.03
CAPN13-206ENST00000485248 FAM212AQ96EL1 285 aa8.63□□□□□ -1.03
CAPN13-206ENST00000485248 CARD11Q9BXL7 1154 aa8.63□□□□□ -1.03
CAPN13-206ENST00000485248 ZNRF3Q9ULT6 936 aa8.63□□□□□ -1.03
CAPN13-206ENST00000485248 NR2E3Q9Y5X4 410 aa8.63□□□□□ -1.03
CAPN13-206ENST00000485248 TRIOBPQ9H2D6 2365 aa8.62□□□□□ -1.03
CAPN13-206ENST00000485248 ALDH1A1P00352 501 aa8.62□□□□□ -1.03
CAPN13-206ENST00000485248 CHRM1P11229 460 aaPredicted RBP8.62□□□□□ -1.03
CAPN13-206ENST00000485248 TNNT2P45379 298 aaPredicted RBP8.62□□□□□ -1.03
CAPN13-206ENST00000485248 EIF5P55010 431 aaKnown RBP8.62□□□□□ -1.03
CAPN13-206ENST00000485248 TTLL12Q14166 644 aaPredicted RBP8.62□□□□□ -1.03
CAPN13-206ENST00000485248 AOC3Q16853 763 aa8.62□□□□□ -1.03
CAPN13-206ENST00000485248 TRPM4Q8TD43 1214 aa8.62□□□□□ -1.03
CAPN13-206ENST00000485248 ERO1AQ96HE7 468 aa8.62□□□□□ -1.03
CAPN13-206ENST00000485248 HTATIP2Q9BUP3 242 aa8.62□□□□□ -1.03
CAPN13-206ENST00000485248 VPS33BQ9H267 617 aa8.62□□□□□ -1.03
CAPN13-206ENST00000485248 CNOT7Q9UIV1 285 aaKnown RBP8.62□□□□□ -1.03
CAPN13-206ENST00000485248 STXBP5LQ9Y2K9 1186 aa8.62□□□□□ -1.03
CAPN13-206ENST00000485248 CUL9Q8IWT3 2517 aa8.62□□□□□ -1.03
CAPN13-206ENST00000485248 FAM177BA6PVY3 158 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 ADM5C9JUS6 153 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 IL6STP40189 918 aaPredicted RBP8.61□□□□□ -1.03
CAPN13-206ENST00000485248 FKBP1BP68106 108 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 CXCL9Q07325 125 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 TCIRG1Q13488 830 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 ARHGEF6Q15052 776 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 OTOP1Q7RTM1 612 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 MICALL2Q8IY33 904 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 DEFB123Q8N688 67 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 TEX13AQ9BXU3 409 aaPredicted RBP8.61□□□□□ -1.03
CAPN13-206ENST00000485248 SLC52A2Q9HAB3 445 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 WDR70Q9NW82 654 aa8.61□□□□□ -1.03
CAPN13-206ENST00000485248 COL4A5P29400 1685 aa8.6□□□□□ -1.03
CAPN13-206ENST00000485248 TCERG1O14776 1098 aaKnown RBP8.6□□□□□ -1.03
CAPN13-206ENST00000485248 PPEF1O14829 653 aaPredicted RBP8.6□□□□□ -1.03
CAPN13-206ENST00000485248 HIRAP54198 1017 aaPredicted RBP8.6□□□□□ -1.03
CAPN13-206ENST00000485248 SLC39A6Q13433 755 aa8.6□□□□□ -1.03
CAPN13-206ENST00000485248 SLC9C1Q4G0N8 1177 aa8.6□□□□□ -1.03
CAPN13-206ENST00000485248 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
CAPN13-206ENST00000485248 ARMC5Q96C12 935 aa8.6□□□□□ -1.03
CAPN13-206ENST00000485248 PTPN22Q9Y2R2 807 aa8.6□□□□□ -1.03
CAPN13-206ENST00000485248 SZT2Q5T011 3432 aa8.6□□□□□ -1.03
CAPN13-206ENST00000485248 MRC1P22897 1456 aa8.59□□□□□ -1.03
CAPN13-206ENST00000485248 RAD17O75943 681 aa8.59□□□□□ -1.03
CAPN13-206ENST00000485248 PLA2G5P39877 138 aa8.59□□□□□ -1.03
CAPN13-206ENST00000485248 TBC1D10BQ4KMP7 808 aaPredicted RBP8.59□□□□□ -1.03
CAPN13-206ENST00000485248 RBM26Q5T8P6 1007 aaKnown RBP8.59□□□□□ -1.03
CAPN13-206ENST00000485248 L3MBTL2Q969R5 705 aa8.59□□□□□ -1.03
CAPN13-206ENST00000485248 RBM17Q96I25 401 aaKnown RBP8.59□□□□□ -1.03
CAPN13-206ENST00000485248 LRCH3Q96II8 777 aa8.59□□□□□ -1.03
CAPN13-206ENST00000485248 EFCC1Q9HA90 598 aa8.59□□□□□ -1.03
CAPN13-206ENST00000485248 KLRG2A4D1S0 409 aaPredicted RBP8.58□□□□□ -1.04
CAPN13-206ENST00000485248 NF2P35240 595 aa8.58□□□□□ -1.04
CAPN13-206ENST00000485248 TM4SF4P48230 202 aa8.58□□□□□ -1.04
CAPN13-206ENST00000485248 MKRN3Q13064 507 aaKnown RBP8.58□□□□□ -1.04
CAPN13-206ENST00000485248 EIF4A2Q14240 407 aaKnown RBP8.58□□□□□ -1.04
CAPN13-206ENST00000485248 GPR153Q6NV75 609 aa8.58□□□□□ -1.04
CAPN13-206ENST00000485248 DLK2Q6UY11 383 aa8.58□□□□□ -1.04
CAPN13-206ENST00000485248 CDCA5Q96FF9 252 aa8.58□□□□□ -1.04
CAPN13-206ENST00000485248 NYXQ9GZU5 481 aa8.58□□□□□ -1.04
CAPN13-206ENST00000485248 NIP7Q9Y221 180 aaKnown RBP eCLIP8.58□□□□□ -1.04
CAPN13-206ENST00000485248 CAMTA2O94983 1202 aa8.57□□□□□ -1.04
CAPN13-206ENST00000485248 MYCP01106 439 aaPredicted RBP8.57□□□□□ -1.04
CAPN13-206ENST00000485248 NEUROD2Q15784 382 aa8.57□□□□□ -1.04
CAPN13-206ENST00000485248 CLEC4GQ6UXB4 293 aa8.57□□□□□ -1.04
CAPN13-206ENST00000485248 SAMD7Q7Z3H4 446 aa8.57□□□□□ -1.04
CAPN13-206ENST00000485248 SYMPKQ92797 1274 aaKnown RBP8.57□□□□□ -1.04
CAPN13-206ENST00000485248 CFHR5Q9BXR6 569 aa8.57□□□□□ -1.04
CAPN13-206ENST00000485248 GGA3Q9NZ52 723 aa8.57□□□□□ -1.04
CAPN13-206ENST00000485248 KIF4BQ2VIQ3 1234 aa8.56□□□□□ -1.04
CAPN13-206ENST00000485248 DPP8Q6V1X1 898 aaPredicted RBP8.56□□□□□ -1.04
CAPN13-206ENST00000485248 ZNF333Q96JL9 665 aa8.56□□□□□ -1.04
CAPN13-206ENST00000485248 MKI67P46013 3256 aaKnown RBP8.56□□□□□ -1.04
CAPN13-206ENST00000485248 ZNF609O15014 1411 aa8.55□□□□□ -1.04
CAPN13-206ENST00000485248 SNED1Q8TER0 1413 aa8.55□□□□□ -1.04
CAPN13-206ENST00000485248 PRAMEF22A3QJZ6 481 aa8.55□□□□□ -1.04
CAPN13-206ENST00000485248 SOX1O00570 391 aaPredicted RBP8.55□□□□□ -1.04
CAPN13-206ENST00000485248 OTUD7BQ6GQQ9 843 aa8.55□□□□□ -1.04
CAPN13-206ENST00000485248 NKX2-3Q8TAU0 364 aa8.55□□□□□ -1.04
CAPN13-206ENST00000485248 CD99L2Q8TCZ2 262 aa8.55□□□□□ -1.04
CAPN13-206ENST00000485248 DPF2Q92785 391 aa8.55□□□□□ -1.04
CAPN13-206ENST00000485248 UBR2Q8IWV8 1755 aa8.55□□□□□ -1.04
CAPN13-206ENST00000485248 POLR2AP24928 1970 aaKnown RBP8.54□□□□□ -1.04
CAPN13-206ENST00000485248 RPS12P25398 132 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms