RNA–Protein interactions for RNA: ENST00000485067.1

USP16-206, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 2

Gene USP16, Length 2,259 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-206ENST00000485067 SPATA31A3Q5VYP0 1347 aa11□□□□□ -0.65
USP16-206ENST00000485067 SURF6O75683 361 aaKnown RBP11□□□□□ -0.65
USP16-206ENST00000485067 CSB-PGBD3P0DP91 1061 aa11□□□□□ -0.65
USP16-206ENST00000485067 PIP4K2AP48426 406 aaPredicted RBP11□□□□□ -0.65
USP16-206ENST00000485067 RBM26Q5T8P6 1007 aaKnown RBP11□□□□□ -0.65
USP16-206ENST00000485067 CCDC94Q9BW85 323 aaPredicted RBP11□□□□□ -0.65
USP16-206ENST00000485067 RPS6KL1Q9Y6S9 549 aa11□□□□□ -0.65
USP16-206ENST00000485067 ADCY9O60503 1353 aa10.99□□□□□ -0.65
USP16-206ENST00000485067 SRGAP3O43295 1099 aa10.99□□□□□ -0.65
USP16-206ENST00000485067 GIGYF1O75420 1035 aaPredicted RBP10.99□□□□□ -0.65
USP16-206ENST00000485067 FOXD4Q12950 439 aaPredicted RBP10.99□□□□□ -0.65
USP16-206ENST00000485067 MTX1Q13505 466 aa10.99□□□□□ -0.65
USP16-206ENST00000485067 RHPN1Q8TCX5 695 aa10.99□□□□□ -0.65
USP16-206ENST00000485067 HYPKQ9NX55 129 aa10.99□□□□□ -0.65
USP16-206ENST00000485067 SCN11AQ9UI33 1791 aa10.99□□□□□ -0.65
USP16-206ENST00000485067 DCCP43146 1447 aa10.99□□□□□ -0.65
USP16-206ENST00000485067 NPHP3Q7Z494 1330 aa10.99□□□□□ -0.65
USP16-206ENST00000485067 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
USP16-206ENST00000485067 TPD52L2O43399 206 aaKnown RBP10.98□□□□□ -0.65
USP16-206ENST00000485067 ONECUT3O60422 494 aaPredicted RBP10.98□□□□□ -0.65
USP16-206ENST00000485067 RILPL2Q969X0 211 aa10.98□□□□□ -0.65
USP16-206ENST00000485067 ZBTB9Q96C00 473 aa10.98□□□□□ -0.65
USP16-206ENST00000485067 CALR3Q96L12 384 aaKnown RBP10.98□□□□□ -0.65
USP16-206ENST00000485067 USP42Q9H9J4 1324 aaKnown RBP10.98□□□□□ -0.65
USP16-206ENST00000485067 CYP27B1O15528 508 aa10.98□□□□□ -0.65
USP16-206ENST00000485067 CYP2E1P05181 493 aaPredicted RBP10.98□□□□□ -0.65
USP16-206ENST00000485067 KSR2Q6VAB6 950 aa10.98□□□□□ -0.65
USP16-206ENST00000485067 NFATC2IPQ8NCF5 419 aa10.98□□□□□ -0.65
USP16-206ENST00000485067 TTC41PQ6P2S7 1318 aa10.97□□□□□ -0.65
USP16-206ENST00000485067 BAG4O95429 457 aaKnown RBP10.97□□□□□ -0.65
USP16-206ENST00000485067 DDX58O95786 925 aaKnown RBP10.97□□□□□ -0.65
USP16-206ENST00000485067 RAPGEF4Q8WZA2 1011 aa10.97□□□□□ -0.65
USP16-206ENST00000485067 C5P01031 1676 aa10.97□□□□□ -0.65
USP16-206ENST00000485067 XRCC6P12956 609 aaKnown RBP eCLIP10.97□□□□□ -0.65
USP16-206ENST00000485067 PHKG2P15735 406 aa10.97□□□□□ -0.65
USP16-206ENST00000485067 ERC1Q8IUD2 1116 aa10.97□□□□□ -0.65
USP16-206ENST00000485067 RETREG2Q8NC44 543 aa10.97□□□□□ -0.65
USP16-206ENST00000485067 ATL2Q8NHH9 583 aa10.97□□□□□ -0.65
USP16-206ENST00000485067 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.97□□□□□ -0.654e-6■■■■□ 22.2
USP16-206ENST00000485067 NEK4P51957 841 aa10.96□□□□□ -0.65
USP16-206ENST00000485067 AIMP1Q12904 312 aaKnown RBP10.96□□□□□ -0.65
USP16-206ENST00000485067 KLHL40Q2TBA0 621 aa10.96□□□□□ -0.65
USP16-206ENST00000485067 CWF19L2Q2TBE0 894 aaKnown RBP10.96□□□□□ -0.65
USP16-206ENST00000485067 CNTROBQ8N137 903 aa10.96□□□□□ -0.65
USP16-206ENST00000485067 CCDC97Q96F63 343 aaPredicted RBP10.96□□□□□ -0.65
USP16-206ENST00000485067 FAM210AQ96ND0 272 aa10.96□□□□□ -0.65
USP16-206ENST00000485067 IL1RAPL2Q9NP60 686 aa10.96□□□□□ -0.65
USP16-206ENST00000485067 ANO2Q9NQ90 1003 aa10.96□□□□□ -0.65
USP16-206ENST00000485067 PDIA6Q15084 440 aa10.96□□□□□ -0.66
USP16-206ENST00000485067 PI4K2BQ8TCG2 481 aa10.96□□□□□ -0.66
USP16-206ENST00000485067 NCAPGQ9BPX3 1015 aa10.96□□□□□ -0.66
USP16-206ENST00000485067 PAIP2Q9BPZ3 127 aaKnown RBP10.96□□□□□ -0.66
USP16-206ENST00000485067 DDX21Q9NR30 783 aaKnown RBP eCLIP10.96□□□□□ -0.66
USP16-206ENST00000485067 C9orf78Q9NZ63 289 aaPredicted RBP10.96□□□□□ -0.66
USP16-206ENST00000485067 MAP3K2Q9Y2U5 619 aa10.96□□□□□ -0.66
USP16-206ENST00000485067 UTYO14607 1347 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 MPHOSPH10O00566 681 aaKnown RBP10.95□□□□□ -0.66
USP16-206ENST00000485067 TATP17735 454 aaPredicted RBP10.95□□□□□ -0.66
USP16-206ENST00000485067 ERCC3P19447 782 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 ZNF280DQ6N043 979 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 BARGINQ6ZT62 677 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 KIAA1211Q6ZU35 1233 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 NUTM1Q86Y26 1132 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 LINS1Q8NG48 757 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 INTS4Q96HW7 963 aaKnown RBP10.95□□□□□ -0.66
USP16-206ENST00000485067 SLAIN2Q9P270 581 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 SPG7Q9UQ90 795 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 MARCH6O60337 910 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 GLRX3O76003 335 aaKnown RBP10.95□□□□□ -0.66
USP16-206ENST00000485067 KCNJ4P48050 445 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 CUL4AQ13619 759 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 ZRSR2Q15696 482 aaKnown RBP10.95□□□□□ -0.66
USP16-206ENST00000485067 GPATCH3Q96I76 525 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 ZNF496Q96IT1 587 aaPredicted RBP10.95□□□□□ -0.66
USP16-206ENST00000485067 SLC52A2Q9HAB3 445 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 GRPEL1Q9HAV7 217 aa10.95□□□□□ -0.66
USP16-206ENST00000485067 MYL6BP14649 208 aa10.94□□□□□ -0.66
USP16-206ENST00000485067 ZNF790Q6PG37 636 aa10.94□□□□□ -0.66
USP16-206ENST00000485067 KRBA2Q6ZNG9 492 aa10.94□□□□□ -0.66
USP16-206ENST00000485067 GET4Q7L5D6 327 aaPredicted RBP10.94□□□□□ -0.66
USP16-206ENST00000485067 UNC5CLQ8IV45 518 aa10.94□□□□□ -0.66
USP16-206ENST00000485067 CLASRPQ8N2M8 674 aaKnown RBP10.94□□□□□ -0.66
USP16-206ENST00000485067 TMX3Q96JJ7 454 aa10.94□□□□□ -0.66
USP16-206ENST00000485067 TRIM34Q9BYJ4 488 aa10.94□□□□□ -0.66
USP16-206ENST00000485067 FAM13BQ9NYF5 915 aa10.94□□□□□ -0.66
USP16-206ENST00000485067 HSPA4P34932 840 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 CSPP1Q1MSJ5 1256 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 JARID2Q92833 1246 aaPredicted RBP10.93□□□□□ -0.66
USP16-206ENST00000485067 NBPF3Q9H094 633 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 USP16Q9Y5T5 823 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 SGSM2O43147 1006 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 CAPN2P17655 700 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 ZC3H12AQ5D1E8 599 aaKnown RBP10.93□□□□□ -0.66
USP16-206ENST00000485067 GORABQ5T7V8 394 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 RUFY2Q8WXA3 655 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 EVI5LQ96CN4 794 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 PRDM11Q9NQV5 511 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 PPME1Q9Y570 386 aa10.93□□□□□ -0.66
USP16-206ENST00000485067 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.93□□□□□ -0.66
USP16-206ENST00000485067 DDX49Q9Y6V7 483 aaKnown RBP10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 144.4 ms