RNA–Protein interactions for RNA: ENST00000484767.5

SND1-211, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-211ENST00000484767 TTC6Q86TZ1 520 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 LLPHQ9BRT6 129 aaKnown RBP10.88□□□□□ -0.67
SND1-211ENST00000484767 TNMDQ9H2S6 317 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 TTC12Q9H892 705 aaPredicted RBP10.88□□□□□ -0.67
SND1-211ENST00000484767 DDX21Q9NR30 783 aaKnown RBP eCLIP10.88□□□□□ -0.673e-11■■□□□ 13.7
SND1-211ENST00000484767 MAP3K2Q9Y2U5 619 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 C5P01031 1676 aa10.88□□□□□ -0.67
SND1-211ENST00000484767 MST1RQ04912 1400 aa10.87□□□□□ -0.67
SND1-211ENST00000484767 CTIFO43310 598 aaKnown RBP10.87□□□□□ -0.67
SND1-211ENST00000484767 NBPF6Q5VWK0 638 aa10.87□□□□□ -0.67
SND1-211ENST00000484767 LARP1Q6PKG0 1096 aaKnown RBP10.87□□□□□ -0.67
SND1-211ENST00000484767 NBPF4Q96M43 638 aa10.87□□□□□ -0.67
SND1-211ENST00000484767 LGR6Q9HBX8 967 aa10.87□□□□□ -0.67
SND1-211ENST00000484767 TPCN1Q9ULQ1 816 aa10.87□□□□□ -0.67
SND1-211ENST00000484767 MRVI1Q9Y6F6 885 aa10.87□□□□□ -0.67
SND1-211ENST00000484767 TRPM3Q9HCF6 1732 aaPredicted RBP10.87□□□□□ -0.67
SND1-211ENST00000484767 SPDYE4A6NLX3 237 aa10.86□□□□□ -0.67
SND1-211ENST00000484767 SASH1O94885 1247 aa10.86□□□□□ -0.67
SND1-211ENST00000484767 ATP5JP18859 108 aa10.86□□□□□ -0.67
SND1-211ENST00000484767 DHX8Q14562 1220 aaKnown RBP10.86□□□□□ -0.67
SND1-211ENST00000484767 SARM1Q6SZW1 724 aa10.86□□□□□ -0.67
SND1-211ENST00000484767 PLA2G4DQ86XP0 818 aa10.86□□□□□ -0.67
SND1-211ENST00000484767 LEO1Q8WVC0 666 aaPredicted RBP10.86□□□□□ -0.67
SND1-211ENST00000484767 LTV1Q96GA3 475 aaPredicted RBP10.86□□□□□ -0.67
SND1-211ENST00000484767 SPATA32Q96LK8 384 aa10.86□□□□□ -0.67
SND1-211ENST00000484767 FSD1Q9BTV5 496 aa10.86□□□□□ -0.67
SND1-211ENST00000484767 KCNF1Q9H3M0 494 aa10.86□□□□□ -0.67
SND1-211ENST00000484767 CFAP45Q9UL16 551 aa10.86□□□□□ -0.67
SND1-211ENST00000484767 ARFGEF2Q9Y6D5 1785 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 SETD1BQ9UPS6 1966 aaKnown RBP10.85□□□□□ -0.67
SND1-211ENST00000484767 SMTNL1A8MU46 457 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 HMGB1P09429 215 aaKnown RBP10.85□□□□□ -0.67
SND1-211ENST00000484767 ZNF75DP51815 510 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 NEXNQ0ZGT2 675 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 PDCL2Q8N4E4 241 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 RGS22Q8NE09 1264 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 ANKRD7Q92527 254 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 EAF2Q96CJ1 260 aaPredicted RBP10.85□□□□□ -0.67
SND1-211ENST00000484767 SUCLG2Q96I99 432 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 ZNF830Q96NB3 372 aaPredicted RBP10.85□□□□□ -0.67
SND1-211ENST00000484767 GTPBP4Q9BZE4 634 aaKnown RBP10.85□□□□□ -0.67
SND1-211ENST00000484767 COPRSQ9NQ92 184 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 PAXBP1Q9Y5B6 917 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 STRCQ7RTU9 1775 aa10.85□□□□□ -0.67
SND1-211ENST00000484767 AP5Z1O43299 807 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 CPA1P15085 419 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 RESTQ13127 1097 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 TOB2Q14106 344 aaPredicted RBP10.84□□□□□ -0.67
SND1-211ENST00000484767 NAA16Q6N069 864 aaPredicted RBP10.84□□□□□ -0.67
SND1-211ENST00000484767 CDC37L1Q7L3B6 337 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 ZNF710Q8N1W2 664 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 USHBP1Q8N6Y0 703 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 GTF3C6Q969F1 213 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 FEZ1Q99689 392 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 CBX8Q9HC52 389 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 PXDNQ92626 1479 aa10.84□□□□□ -0.67
SND1-211ENST00000484767 PARP4Q9UKK3 1724 aaKnown RBP10.84□□□□□ -0.67
SND1-211ENST00000484767 TMEM94Q12767 1356 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 KCNQ3O43525 872 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 TAF5LO75529 589 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 KCNA6P17658 529 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 LIG1P18858 919 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 ANO6Q4KMQ2 910 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 NECAB1Q8N987 351 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 SMARCC2Q8TAQ2 1214 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 MRFAP1L1Q96HT8 127 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 FAM227BQ96M60 508 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 NEK1Q96PY6 1258 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 BICC1Q9H694 974 aaKnown RBP10.83□□□□□ -0.68
SND1-211ENST00000484767 BCL2L12Q9HB09 334 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 KCND1Q9NSA2 647 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 DACT1Q9NYF0 836 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 PYCARDQ9ULZ3 195 aa10.83□□□□□ -0.68
SND1-211ENST00000484767 PA2G4Q9UQ80 394 aaKnown RBP10.83□□□□□ -0.68
SND1-211ENST00000484767 PALLDQ8WX93 1383 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 A0A0D9SFI3 127 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 KIF2AO00139 706 aaPredicted RBP10.82□□□□□ -0.68
SND1-211ENST00000484767 RIOK3O14730 519 aaKnown RBP10.82□□□□□ -0.68
SND1-211ENST00000484767 DMTNQ08495 405 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 ARHGEF25Q86VW2 580 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 KAZALD1Q96I82 304 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 ZNF396Q96N95 335 aaPredicted RBP10.82□□□□□ -0.68
SND1-211ENST00000484767 METTL22Q9BUU2 404 aaPredicted RBP10.82□□□□□ -0.68
SND1-211ENST00000484767 RCOR1Q9UKL0 485 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 PRDM4Q9UKN5 801 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 LTBP4Q8N2S1 1624 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 RGPD5Q99666 1765 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 SH3TC1Q8TE82 1336 aa10.82□□□□□ -0.68
SND1-211ENST00000484767 PKD1L3Q7Z443 1732 aa10.81□□□□□ -0.68
SND1-211ENST00000484767 DDX60Q8IY21 1712 aaKnown RBP10.81□□□□□ -0.68
SND1-211ENST00000484767 NEURL1BA8MQ27 555 aa10.81□□□□□ -0.68
SND1-211ENST00000484767 PFKFB2O60825 505 aa10.81□□□□□ -0.68
SND1-211ENST00000484767 TUBB4AP04350 444 aa10.81□□□□□ -0.68
SND1-211ENST00000484767 ZNF165P49910 485 aa10.81□□□□□ -0.68
SND1-211ENST00000484767 PLCB2Q00722 1185 aa10.81□□□□□ -0.68
SND1-211ENST00000484767 STX1AQ16623 288 aa10.81□□□□□ -0.68
SND1-211ENST00000484767 CWF19L2Q2TBE0 894 aaKnown RBP10.81□□□□□ -0.68
SND1-211ENST00000484767 NUTM2GQ5VZR2 741 aa10.81□□□□□ -0.68
SND1-211ENST00000484767 MPRIPQ6WCQ1 1025 aa10.81□□□□□ -0.68
SND1-211ENST00000484767 BICD2Q8TD16 824 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms