RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 RPGRQ92834 1020 aaKnown RBP23.79■■□□□ 1.4
PDLIM4-207ENST00000484620 CHMP3Q9Y3E7 222 aa23.79■■□□□ 1.4
PDLIM4-207ENST00000484620 CD2APQ9Y5K6 639 aa23.79■■□□□ 1.4
PDLIM4-207ENST00000484620 CSF1RP07333 972 aa23.78■■□□□ 1.4
PDLIM4-207ENST00000484620 CRY2Q49AN0 593 aa23.78■■□□□ 1.4
PDLIM4-207ENST00000484620 C3orf67Q6ZVT6 689 aa23.78■■□□□ 1.4
PDLIM4-207ENST00000484620 LRP5O75197 1615 aa23.77■■□□□ 1.4
PDLIM4-207ENST00000484620 H0YIN7 160 aa23.77■■□□□ 1.4
PDLIM4-207ENST00000484620 C2CD5Q86YS7 1000 aa23.77■■□□□ 1.4
PDLIM4-207ENST00000484620 RTL9Q8NET4 1388 aa23.77■■□□□ 1.4
PDLIM4-207ENST00000484620 TGFB2P61812 414 aa23.76■■□□□ 1.39
PDLIM4-207ENST00000484620 MTX1Q13505 466 aa23.76■■□□□ 1.39
PDLIM4-207ENST00000484620 RPAP2Q8IXW5 612 aaPredicted RBP23.76■■□□□ 1.39
PDLIM4-207ENST00000484620 CCDC85AQ96PX6 553 aaPredicted RBP23.76■■□□□ 1.39
PDLIM4-207ENST00000484620 COL11A2P13942 1736 aaPredicted RBP23.76■■□□□ 1.39
PDLIM4-207ENST00000484620 NPR1P16066 1061 aa23.75■■□□□ 1.39
PDLIM4-207ENST00000484620 CCDC57Q2TAC2 916 aa23.75■■□□□ 1.39
PDLIM4-207ENST00000484620 FAM161AQ3B820 660 aa23.75■■□□□ 1.39
PDLIM4-207ENST00000484620 DDX46Q7L014 1031 aaKnown RBP23.75■■□□□ 1.39
PDLIM4-207ENST00000484620 RBM17Q96I25 401 aaKnown RBP23.75■■□□□ 1.39
PDLIM4-207ENST00000484620 SRGNP10124 158 aa23.74■■□□□ 1.39
PDLIM4-207ENST00000484620 ATP8B2P98198 1209 aa23.74■■□□□ 1.39
PDLIM4-207ENST00000484620 IFIT5Q13325 482 aaKnown RBP23.74■■□□□ 1.39
PDLIM4-207ENST00000484620 CEP85Q6P2H3 762 aa23.74■■□□□ 1.39
PDLIM4-207ENST00000484620 MASTLQ96GX5 879 aa23.74■■□□□ 1.39
PDLIM4-207ENST00000484620 GREM2Q9H772 168 aa23.74■■□□□ 1.39
PDLIM4-207ENST00000484620 DLEC1Q9Y238 1755 aa23.73■■□□□ 1.39
PDLIM4-207ENST00000484620 ANKRD18BA2A2Z9 1011 aa23.73■■□□□ 1.39
PDLIM4-207ENST00000484620 SRGAP3O43295 1099 aa23.73■■□□□ 1.39
PDLIM4-207ENST00000484620 HOXA10P31260 410 aaPredicted RBP23.73■■□□□ 1.39
PDLIM4-207ENST00000484620 CDC5LQ99459 802 aaKnown RBP23.73■■□□□ 1.39
PDLIM4-207ENST00000484620 HMMRO75330 724 aa23.72■■□□□ 1.39
PDLIM4-207ENST00000484620 ITGA6P23229 1130 aa23.72■■□□□ 1.39
PDLIM4-207ENST00000484620 STYK1Q6J9G0 422 aa23.72■■□□□ 1.39
PDLIM4-207ENST00000484620 KIAA1551Q9HCM1 1747 aa23.71■■□□□ 1.39
PDLIM4-207ENST00000484620 CHRNA5P30532 468 aa23.71■■□□□ 1.39
PDLIM4-207ENST00000484620 TAF7LQ5H9L4 462 aa23.71■■□□□ 1.39
PDLIM4-207ENST00000484620 ZNF622Q969S3 477 aaKnown RBP eCLIP23.71■■□□□ 1.39
PDLIM4-207ENST00000484620 CRAMP1Q96RY5 1269 aa23.71■■□□□ 1.39
PDLIM4-207ENST00000484620 FHDC1Q9C0D6 1143 aaPredicted RBP23.71■■□□□ 1.39
PDLIM4-207ENST00000484620 DPEP1P16444 411 aa23.7■■□□□ 1.38
PDLIM4-207ENST00000484620 ALDH1B1P30837 517 aa23.7■■□□□ 1.38
PDLIM4-207ENST00000484620 ERICH6BQ5W0A0 696 aa23.7■■□□□ 1.38
PDLIM4-207ENST00000484620 SEC31BQ9NQW1 1179 aa23.7■■□□□ 1.38
PDLIM4-207ENST00000484620 A0A0G2JLW4 131 aa23.69■■□□□ 1.38
PDLIM4-207ENST00000484620 PNMA6EA0A0J9YXQ4 647 aa23.69■■□□□ 1.38
PDLIM4-207ENST00000484620 GRAPQ13588 217 aa23.69■■□□□ 1.38
PDLIM4-207ENST00000484620 GRAPLQ8TC17 118 aaPredicted RBP23.69■■□□□ 1.38
PDLIM4-207ENST00000484620 SSH3Q8TE77 659 aa23.69■■□□□ 1.38
PDLIM4-207ENST00000484620 CNKSR1Q969H4 720 aa23.69■■□□□ 1.38
PDLIM4-207ENST00000484620 PCDHB15Q9Y5E8 787 aa23.69■■□□□ 1.38
PDLIM4-207ENST00000484620 IGHMBP2P38935 993 aaKnown RBP23.68■■□□□ 1.38
PDLIM4-207ENST00000484620 ANKRD18AQ8IVF6 992 aa23.68■■□□□ 1.38
PDLIM4-207ENST00000484620 POLA2Q14181 598 aa23.67■■□□□ 1.38
PDLIM4-207ENST00000484620 TAF1P21675 1872 aa23.66■■□□□ 1.38
PDLIM4-207ENST00000484620 RFX5P48382 616 aaPredicted RBP23.66■■□□□ 1.38
PDLIM4-207ENST00000484620 RPS8P62241 208 aaKnown RBP23.66■■□□□ 1.38
PDLIM4-207ENST00000484620 CELF1Q92879 486 aaKnown RBP23.66■■□□□ 1.38
PDLIM4-207ENST00000484620 MPHOSPH8Q99549 860 aa23.66■■□□□ 1.38
PDLIM4-207ENST00000484620 PIM2Q9P1W9 311 aa23.66■■□□□ 1.38
PDLIM4-207ENST00000484620 CACNA1SQ13698 1873 aa23.66■■□□□ 1.38
PDLIM4-207ENST00000484620 SPEF2Q9C093 1822 aa23.66■■□□□ 1.38
PDLIM4-207ENST00000484620 BBOX1O75936 387 aa23.65■■□□□ 1.38
PDLIM4-207ENST00000484620 TMC4Q7Z404 712 aa23.65■■□□□ 1.38
PDLIM4-207ENST00000484620 SIRT2Q8IXJ6 389 aa23.65■■□□□ 1.38
PDLIM4-207ENST00000484620 TTLL6Q8N841 843 aa23.65■■□□□ 1.38
PDLIM4-207ENST00000484620 NLGN2Q8NFZ4 835 aa23.65■■□□□ 1.38
PDLIM4-207ENST00000484620 SYT17Q9BSW7 474 aa23.65■■□□□ 1.38
PDLIM4-207ENST00000484620 COPRSQ9NQ92 184 aa23.65■■□□□ 1.38
PDLIM4-207ENST00000484620 KCNA3P22001 575 aa23.64■■□□□ 1.37
PDLIM4-207ENST00000484620 PTPN12Q05209 780 aaKnown RBP23.64■■□□□ 1.37
PDLIM4-207ENST00000484620 ZNF594Q96JF6 807 aaPredicted RBP23.64■■□□□ 1.37
PDLIM4-207ENST00000484620 BRCA1P38398 1863 aaKnown RBP23.64■■□□□ 1.37
PDLIM4-207ENST00000484620 PPEF1O14829 653 aaPredicted RBP23.63■■□□□ 1.37
PDLIM4-207ENST00000484620 LDHAL6AQ6ZMR3 332 aa23.63■■□□□ 1.37
PDLIM4-207ENST00000484620 KLHDC4Q8TBB5 520 aa23.63■■□□□ 1.37
PDLIM4-207ENST00000484620 RWDD1Q9H446 243 aaPredicted RBP23.63■■□□□ 1.37
PDLIM4-207ENST00000484620 CNNM1Q9NRU3 951 aa23.63■■□□□ 1.37
PDLIM4-207ENST00000484620 FBXO3Q9UK99 471 aa23.63■■□□□ 1.37
PDLIM4-207ENST00000484620 HDAC1Q13547 482 aaPredicted RBP23.62■■□□□ 1.37
PDLIM4-207ENST00000484620 PRPF40BQ6NWY9 871 aaKnown RBP23.62■■□□□ 1.37
PDLIM4-207ENST00000484620 TMX4Q9H1E5 349 aaPredicted RBP23.62■■□□□ 1.37
PDLIM4-207ENST00000484620 BSDC1Q9NW68 430 aaPredicted RBP23.62■■□□□ 1.37
PDLIM4-207ENST00000484620 PA2G4Q9UQ80 394 aaKnown RBP23.62■■□□□ 1.37
PDLIM4-207ENST00000484620 COL4A1P02462 1669 aa23.61■■□□□ 1.37
PDLIM4-207ENST00000484620 EYA2O00167 538 aa23.61■■□□□ 1.37
PDLIM4-207ENST00000484620 SURF6O75683 361 aaKnown RBP23.61■■□□□ 1.37
PDLIM4-207ENST00000484620 DALRD3Q5D0E6 543 aaKnown RBP23.61■■□□□ 1.37
PDLIM4-207ENST00000484620 SIL1Q9H173 461 aa23.61■■□□□ 1.37
PDLIM4-207ENST00000484620 CIAO1O76071 339 aa23.6■■□□□ 1.37
PDLIM4-207ENST00000484620 G3BP1Q13283 466 aaKnown RBP eCLIP23.6■■□□□ 1.37
PDLIM4-207ENST00000484620 OS9Q13438 667 aaPredicted RBP23.6■■□□□ 1.37
PDLIM4-207ENST00000484620 HSP90AB4PQ58FF6 505 aa23.6■■□□□ 1.37
PDLIM4-207ENST00000484620 SLX4Q8IY92 1834 aa23.6■■□□□ 1.37
PDLIM4-207ENST00000484620 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
PDLIM4-207ENST00000484620 SRCAPQ6ZRS2 3230 aa23.59■■□□□ 1.37
PDLIM4-207ENST00000484620 IL15P40933 162 aaPredicted RBP23.58■■□□□ 1.37
PDLIM4-207ENST00000484620 SP8Q8IXZ3 490 aa23.58■■□□□ 1.37
PDLIM4-207ENST00000484620 ATP6V0A2Q9Y487 856 aa23.58■■□□□ 1.37
PDLIM4-207ENST00000484620 LRRC37AA6NMS7 1700 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms