RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 KMT5BQ4FZB7 885 aa23.29■■□□□ 1.32
RPUSD3-216ENST00000484134 BOLA2Q9H3K6 86 aa23.29■■□□□ 1.32
RPUSD3-216ENST00000484134 LTKP29376 864 aa23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 GABPB1Q06547 395 aaPredicted RBP23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 NYAP1Q6ZVC0 841 aa23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 BRF1Q92994 677 aa23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 MAP3K2Q9Y2U5 619 aa23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 SARM1Q6SZW1 724 aa23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 ERC1Q8IUD2 1116 aa23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 SLC26A8Q96RN1 970 aa23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 USP16Q9Y5T5 823 aa23.28■■□□□ 1.32
RPUSD3-216ENST00000484134 RNF20Q5VTR2 975 aa23.27■■□□□ 1.32
RPUSD3-216ENST00000484134 KAZALD1Q96I82 304 aa23.27■■□□□ 1.32
RPUSD3-216ENST00000484134 MED23Q9ULK4 1368 aa23.27■■□□□ 1.32
RPUSD3-216ENST00000484134 HIP1O00291 1037 aa23.27■■□□□ 1.32
RPUSD3-216ENST00000484134 GIGYF1O75420 1035 aaPredicted RBP23.27■■□□□ 1.32
RPUSD3-216ENST00000484134 CEBPZQ03701 1054 aaKnown RBP23.27■■□□□ 1.32
RPUSD3-216ENST00000484134 PROSER3Q2NL68 480 aa23.27■■□□□ 1.32
RPUSD3-216ENST00000484134 FSD1Q9BTV5 496 aa23.27■■□□□ 1.32
RPUSD3-216ENST00000484134 RGPD8O14715 1765 aaPredicted RBP23.27■■□□□ 1.32
RPUSD3-216ENST00000484134 SKILP12757 684 aa23.26■■□□□ 1.31
RPUSD3-216ENST00000484134 HOXB7P09629 217 aa23.26■■□□□ 1.31
RPUSD3-216ENST00000484134 GTF3C6Q969F1 213 aa23.26■■□□□ 1.31
RPUSD3-216ENST00000484134 MRFAP1L1Q96HT8 127 aa23.26■■□□□ 1.31
RPUSD3-216ENST00000484134 EDC3Q96F86 508 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-216ENST00000484134 FTOQ9C0B1 505 aaKnown RBP eCLIP23.25■■□□□ 1.31
RPUSD3-216ENST00000484134 TRMT1Q9NXH9 659 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-216ENST00000484134 GOLGA6L19H0YKK7 550 aa23.25■■□□□ 1.31
RPUSD3-216ENST00000484134 ADD1P35611 737 aaKnown RBP23.25■■□□□ 1.31
RPUSD3-216ENST00000484134 CCZ1BP86790 482 aa23.25■■□□□ 1.31
RPUSD3-216ENST00000484134 CCZ1P86791 482 aaPredicted RBP23.25■■□□□ 1.31
RPUSD3-216ENST00000484134 PTPN14Q15678 1187 aa23.25■■□□□ 1.31
RPUSD3-216ENST00000484134 TSGA10IPQ3SY00 556 aa23.25■■□□□ 1.31
RPUSD3-216ENST00000484134 TAF5LO75529 589 aa23.24■■□□□ 1.31
RPUSD3-216ENST00000484134 CAVIN2O95810 425 aa23.24■■□□□ 1.31
RPUSD3-216ENST00000484134 SUCLG2Q96I99 432 aa23.24■■□□□ 1.31
RPUSD3-216ENST00000484134 GOLPH3LQ9H4A5 285 aa23.24■■□□□ 1.31
RPUSD3-216ENST00000484134 DIP2BQ9P265 1576 aa23.24■■□□□ 1.31
RPUSD3-216ENST00000484134 COL15A1P39059 1388 aa23.24■■□□□ 1.31
RPUSD3-216ENST00000484134 ERBB3P21860 1342 aa23.24■■□□□ 1.31
RPUSD3-216ENST00000484134 CCDC69A6NI79 296 aa23.23■■□□□ 1.31
RPUSD3-216ENST00000484134 ALDH1L1O75891 902 aa23.23■■□□□ 1.31
RPUSD3-216ENST00000484134 FILIP1Q7Z7B0 1213 aa23.23■■□□□ 1.31
RPUSD3-216ENST00000484134 ZNF397Q8NF99 534 aaPredicted RBP23.23■■□□□ 1.31
RPUSD3-216ENST00000484134 JCADQ9P266 1359 aa23.23■■□□□ 1.31
RPUSD3-216ENST00000484134 FAM69CQ0P6D2 419 aa23.23■■□□□ 1.31
RPUSD3-216ENST00000484134 DHX40Q8IX18 779 aaKnown RBP23.23■■□□□ 1.31
RPUSD3-216ENST00000484134 TERF2Q15554 542 aa23.22■■□□□ 1.31
RPUSD3-216ENST00000484134 FBXO38Q6PIJ6 1188 aa23.22■■□□□ 1.31
RPUSD3-216ENST00000484134 SIL1Q9H173 461 aa23.22■■□□□ 1.31
RPUSD3-216ENST00000484134 BICC1Q9H694 974 aaKnown RBP23.22■■□□□ 1.31
RPUSD3-216ENST00000484134 FAM53CQ9NYF3 392 aa23.22■■□□□ 1.31
RPUSD3-216ENST00000484134 TNRQ92752 1358 aa23.22■■□□□ 1.31
RPUSD3-216ENST00000484134 NEMFO60524 1076 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 CHGBP05060 677 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 G3BP1Q13283 466 aaKnown RBP eCLIP23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 SNW1Q13573 536 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 ELF2Q15723 593 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 CCAR1Q8IX12 1150 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 KLHDC4Q8TBB5 520 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 HMG20BQ9P0W2 317 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 DBF4Q9UBU7 674 aaPredicted RBP23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 MED1Q15648 1581 aaPredicted RBP23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 H3BQV1 296 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 STX1AQ16623 288 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 IFFO2Q5TF58 517 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 USPL1Q5W0Q7 1092 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 KSR2Q6VAB6 950 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 CCAR2Q8N163 923 aaKnown RBP23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 KRT222Q8N1A0 295 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 AMOTL2Q9Y2J4 779 aa23.21■■□□□ 1.31
RPUSD3-216ENST00000484134 Q6ZUG5 572 aa23.2■■□□□ 1.3
RPUSD3-216ENST00000484134 ERCC4Q92889 916 aaPredicted RBP23.2■■□□□ 1.3
RPUSD3-216ENST00000484134 CFAP45Q9UL16 551 aa23.2■■□□□ 1.3
RPUSD3-216ENST00000484134 KDM3BQ7LBC6 1761 aa23.2■■□□□ 1.3
RPUSD3-216ENST00000484134 PRAMEF22A3QJZ6 481 aa23.2■■□□□ 1.3
RPUSD3-216ENST00000484134 BTBD11A6QL63 1104 aa23.2■■□□□ 1.3
RPUSD3-216ENST00000484134 FOSBP53539 338 aa23.2■■□□□ 1.3
RPUSD3-216ENST00000484134 LRRC2Q9BYS8 371 aa23.2■■□□□ 1.3
RPUSD3-216ENST00000484134 MARF1Q9Y4F3 1742 aaKnown RBP23.2■■□□□ 1.3
RPUSD3-216ENST00000484134 UBR1Q8IWV7 1749 aa23.19■■□□□ 1.3
RPUSD3-216ENST00000484134 NBPF6Q5VWK0 638 aa23.19■■□□□ 1.3
RPUSD3-216ENST00000484134 NBPF4Q96M43 638 aa23.19■■□□□ 1.3
RPUSD3-216ENST00000484134 NEK1Q96PY6 1258 aa23.19■■□□□ 1.3
RPUSD3-216ENST00000484134 ZSCAN16Q9H4T2 348 aaPredicted RBP23.19■■□□□ 1.3
RPUSD3-216ENST00000484134 ESF1Q9H501 851 aaKnown RBP23.19■■□□□ 1.3
RPUSD3-216ENST00000484134 RCOR1Q9UKL0 485 aa23.19■■□□□ 1.3
RPUSD3-216ENST00000484134 TSPOAP1O95153 1857 aa23.19■■□□□ 1.3
RPUSD3-216ENST00000484134 SCRN1Q12765 414 aa23.18■■□□□ 1.3
RPUSD3-216ENST00000484134 MPRIPQ6WCQ1 1025 aa23.18■■□□□ 1.3
RPUSD3-216ENST00000484134 ST7Q9NRC1 585 aa23.18■■□□□ 1.3
RPUSD3-216ENST00000484134 BECN2A8MW95 431 aa23.18■■□□□ 1.3
RPUSD3-216ENST00000484134 GRM8O00222 908 aa23.18■■□□□ 1.3
RPUSD3-216ENST00000484134 ERO1AQ96HE7 468 aa23.18■■□□□ 1.3
RPUSD3-216ENST00000484134 ZNF446Q9NWS9 450 aa23.18■■□□□ 1.3
RPUSD3-216ENST00000484134 NDUFB9Q9Y6M9 179 aa23.18■■□□□ 1.3
RPUSD3-216ENST00000484134 PLEKHG1Q9ULL1 1385 aa23.17■■□□□ 1.3
RPUSD3-216ENST00000484134 ENGASEQ8NFI3 743 aa23.17■■□□□ 1.3
RPUSD3-216ENST00000484134 HSP90B1P14625 803 aaKnown RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms