RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 FKBP5Q13451 457 aaPredicted RBP6.77□□□□□ -1.33
LAPTM4A-202ENST00000483117 C11orf91Q3C1V1 193 aa6.77□□□□□ -1.33
LAPTM4A-202ENST00000483117 TRAPPC3LQ5T215 181 aa6.77□□□□□ -1.33
LAPTM4A-202ENST00000483117 PSAPL1Q6NUJ1 521 aa6.77□□□□□ -1.33
LAPTM4A-202ENST00000483117 EFCC1Q9HA90 598 aa6.77□□□□□ -1.33
LAPTM4A-202ENST00000483117 ZFATQ9P243 1243 aa6.77□□□□□ -1.33
LAPTM4A-202ENST00000483117 PRMT3O60678 531 aa6.76□□□□□ -1.33
LAPTM4A-202ENST00000483117 APBA3O96018 575 aa6.76□□□□□ -1.33
LAPTM4A-202ENST00000483117 TARSP26639 723 aaKnown RBP6.76□□□□□ -1.33
LAPTM4A-202ENST00000483117 IFT43Q96FT9 208 aa6.76□□□□□ -1.33
LAPTM4A-202ENST00000483117 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.75□□□□□ -1.33
LAPTM4A-202ENST00000483117 OPLAHO14841 1288 aa6.75□□□□□ -1.33
LAPTM4A-202ENST00000483117 SASH3O75995 380 aa6.75□□□□□ -1.33
LAPTM4A-202ENST00000483117 CPB1P15086 417 aa6.75□□□□□ -1.33
LAPTM4A-202ENST00000483117 COX20Q5RI15 118 aa6.75□□□□□ -1.33
LAPTM4A-202ENST00000483117 KRTAP5-3Q6L8H2 238 aa6.75□□□□□ -1.33
LAPTM4A-202ENST00000483117 STK32AQ8WU08 396 aa6.75□□□□□ -1.33
LAPTM4A-202ENST00000483117 ACIN1Q9UKV3 1341 aaKnown RBP6.75□□□□□ -1.33
LAPTM4A-202ENST00000483117 A0A0A0MRY4 1105 aa6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 SCO2A0A1W2PP80 73 aa6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 ZBTB42B2RXF5 422 aa6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 AFF1P51825 1210 aaKnown RBP6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 SRPK2P78362 688 aaKnown RBP6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 MLLT1Q03111 559 aaPredicted RBP6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 FAM69CQ0P6D2 419 aa6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 SWI5Q1ZZU3 235 aa6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 DHX32Q7L7V1 743 aaKnown RBP6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 FAM35AQ86V20 835 aa6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 TREML1Q86YW5 311 aa6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 SEMA6BQ9H3T3 888 aa6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.74□□□□□ -1.332e-32■■■■■ 341.6
LAPTM4A-202ENST00000483117 RTCBQ9Y3I0 505 aaKnown RBP6.74□□□□□ -1.33
LAPTM4A-202ENST00000483117 RGS9O75916 674 aaPredicted RBP6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 MAP3K6O95382 1288 aa6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 RARAP10276 462 aa6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 PLAURQ03405 335 aa6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 ELOAQ14241 798 aaKnown RBP6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 OCLNQ16625 522 aa6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 DMRTC2Q8IXT2 367 aaPredicted RBP6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 RGL4Q8IZJ4 473 aa6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 NACC1Q96RE7 527 aa6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 SAP130Q9H0E3 1048 aa6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 TPSG1Q9NRR2 321 aa6.73□□□□□ -1.33
LAPTM4A-202ENST00000483117 SELPP16109 830 aa6.72□□□□□ -1.33
LAPTM4A-202ENST00000483117 RSPO4Q2I0M5 234 aaPredicted RBP6.72□□□□□ -1.33
LAPTM4A-202ENST00000483117 CAPN12Q6ZSI9 719 aa6.72□□□□□ -1.33
LAPTM4A-202ENST00000483117 CMTR1Q8N1G2 835 aaKnown RBP6.72□□□□□ -1.33
LAPTM4A-202ENST00000483117 LPIN3Q9BQK8 851 aa6.72□□□□□ -1.33
LAPTM4A-202ENST00000483117 MKNK1Q9BUB5 465 aa6.72□□□□□ -1.33
LAPTM4A-202ENST00000483117 KRTAP4-11Q9BYQ6 195 aa6.72□□□□□ -1.33
LAPTM4A-202ENST00000483117 XYLBO75191 536 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 GRIK5Q16478 980 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 PCSK7Q16549 785 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 FAM26DQ5JW98 314 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 PERM1Q5SV97 790 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 SHISA2Q6UWI4 295 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 HFE2Q6ZVN8 426 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 TRPM4Q8TD43 1214 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 KRTAP4-5Q9BYR2 181 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 ZMYND15Q9H091 742 aa6.71□□□□□ -1.34
LAPTM4A-202ENST00000483117 ATG7O95352 703 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 ELNP15502 786 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 YBX3P16989 372 aaKnown RBP eCLIP6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 RAC1P63000 192 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 GPLD1P80108 840 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 TMEM164Q5U3C3 297 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 ILDR2Q71H61 639 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 ETFBKMTQ8IXQ9 262 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 ZFP64Q9NPA5 681 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 C11orf16Q9NQ32 467 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 KCNMB2Q9Y691 235 aa6.7□□□□□ -1.34
LAPTM4A-202ENST00000483117 C9orf172C9J069 976 aa6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 EGFRP00533 1210 aa6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 MBTPS1Q14703 1052 aa6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 NAA30Q147X3 362 aaPredicted RBP6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 NKAPLQ5M9Q1 402 aa6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 MSL1Q68DK7 614 aa6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 C16orf46Q6P387 395 aa6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 ELMSAN1Q6PJG2 1045 aa6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 NBPF11Q86T75 865 aa6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 FMR1NBQ8N0W7 255 aaPredicted RBP6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 TLR7Q9NYK1 1049 aaKnown RBP6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 FRRS1LQ9P0K9 344 aa6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 CXXC1Q9P0U4 656 aaPredicted RBP6.69□□□□□ -1.34
LAPTM4A-202ENST00000483117 MMP20O60882 483 aa6.68□□□□□ -1.34
LAPTM4A-202ENST00000483117 EIF2AK2P19525 551 aaKnown RBP6.68□□□□□ -1.34
LAPTM4A-202ENST00000483117 NRLP54845 237 aa6.68□□□□□ -1.34
LAPTM4A-202ENST00000483117 ADGRE1Q14246 886 aa6.68□□□□□ -1.34
LAPTM4A-202ENST00000483117 ARTNQ5T4W7 220 aa6.68□□□□□ -1.34
LAPTM4A-202ENST00000483117 SMG9Q9H0W8 520 aaKnown RBP6.68□□□□□ -1.34
LAPTM4A-202ENST00000483117 J3QW42 95 aa6.67□□□□□ -1.34
LAPTM4A-202ENST00000483117 TNFRSF10BO14763 440 aa6.67□□□□□ -1.34
LAPTM4A-202ENST00000483117 BRD2P25440 801 aaKnown RBP6.67□□□□□ -1.34
LAPTM4A-202ENST00000483117 TRIP4Q15650 581 aaPredicted RBP6.67□□□□□ -1.34
LAPTM4A-202ENST00000483117 FOXD4L6Q3SYB3 417 aaPredicted RBP6.67□□□□□ -1.34
LAPTM4A-202ENST00000483117 FOXD4L3Q6VB84 417 aaPredicted RBP6.67□□□□□ -1.34
LAPTM4A-202ENST00000483117 LENG1Q96BZ8 264 aaPredicted RBP6.67□□□□□ -1.34
LAPTM4A-202ENST00000483117 SLAIN2Q9P270 581 aa6.67□□□□□ -1.34
LAPTM4A-202ENST00000483117 ARID3CA6NKF2 412 aa6.66□□□□□ -1.34
LAPTM4A-202ENST00000483117 DYRK3O43781 588 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms