RNA–Protein interactions for RNA: ENST00000482933.1

COL21A1-209, Transcript of collagen type XXI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL21A1, Length 1,413 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-209ENST00000482933 RRAGCQ9HB90 399 aa16.67■□□□□ 0.26
COL21A1-209ENST00000482933 TNRC6CQ9HCJ0 1690 aaKnown RBP16.67■□□□□ 0.26
COL21A1-209ENST00000482933 GPTP24298 496 aa16.66■□□□□ 0.26
COL21A1-209ENST00000482933 ERFEQ4G0M1 354 aa16.66■□□□□ 0.26
COL21A1-209ENST00000482933 PARP10Q53GL7 1025 aa16.66■□□□□ 0.26
COL21A1-209ENST00000482933 CCDC93Q567U6 631 aa16.66■□□□□ 0.26
COL21A1-209ENST00000482933 LRP10Q7Z4F1 713 aa16.66■□□□□ 0.26
COL21A1-209ENST00000482933 NUTM1Q86Y26 1132 aa16.66■□□□□ 0.26
COL21A1-209ENST00000482933 MICALL2Q8IY33 904 aa16.66■□□□□ 0.26
COL21A1-209ENST00000482933 CFAP44Q96MT7 982 aa16.66■□□□□ 0.26
COL21A1-209ENST00000482933 UBN2Q6ZU65 1347 aa16.65■□□□□ 0.26
COL21A1-209ENST00000482933 HOXB7P09629 217 aa16.65■□□□□ 0.26
COL21A1-209ENST00000482933 HSP90AB3PQ58FF7 597 aa16.65■□□□□ 0.26
COL21A1-209ENST00000482933 SUSD4Q5VX71 490 aa16.65■□□□□ 0.26
COL21A1-209ENST00000482933 C7orf43Q8WVR3 580 aa16.65■□□□□ 0.26
COL21A1-209ENST00000482933 NECTIN2Q92692 538 aa16.65■□□□□ 0.26
COL21A1-209ENST00000482933 MS4A4AQ96JQ5 239 aa16.65■□□□□ 0.26
COL21A1-209ENST00000482933 DICER1Q9UPY3 1922 aaKnown RBP16.65■□□□□ 0.26
COL21A1-209ENST00000482933 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
COL21A1-209ENST00000482933 RIC1Q4ADV7 1423 aa16.64■□□□□ 0.25
COL21A1-209ENST00000482933 APAF1O14727 1248 aa16.64■□□□□ 0.25
COL21A1-209ENST00000482933 ANXA1P04083 346 aa16.64■□□□□ 0.25
COL21A1-209ENST00000482933 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
COL21A1-209ENST00000482933 PROSER3Q2NL68 480 aa16.64■□□□□ 0.25
COL21A1-209ENST00000482933 COPS6Q7L5N1 327 aa16.64■□□□□ 0.25
COL21A1-209ENST00000482933 DDX21Q9NR30 783 aaKnown RBP eCLIP16.64■□□□□ 0.25
COL21A1-209ENST00000482933 ABCC12Q96J65 1359 aa16.63■□□□□ 0.25
COL21A1-209ENST00000482933 VEGFAP15692 232 aaPredicted RBP16.63■□□□□ 0.25
COL21A1-209ENST00000482933 CRY2Q49AN0 593 aa16.63■□□□□ 0.25
COL21A1-209ENST00000482933 NTSR2O95665 410 aa16.62■□□□□ 0.25
COL21A1-209ENST00000482933 FSTL1Q12841 308 aa16.62■□□□□ 0.25
COL21A1-209ENST00000482933 AIMP1Q12904 312 aaKnown RBP16.62■□□□□ 0.25
COL21A1-209ENST00000482933 KRT24Q2M2I5 525 aa16.62■□□□□ 0.25
COL21A1-209ENST00000482933 HDGFL1Q5TGJ6 251 aa16.62■□□□□ 0.25
COL21A1-209ENST00000482933 RTKN2Q8IZC4 609 aa16.62■□□□□ 0.25
COL21A1-209ENST00000482933 XAGE3Q8WTP9 111 aa16.62■□□□□ 0.25
COL21A1-209ENST00000482933 RPGRQ92834 1020 aaKnown RBP16.62■□□□□ 0.25
COL21A1-209ENST00000482933 APLP1P51693 650 aa16.62■□□□□ 0.25
COL21A1-209ENST00000482933 FKBP4Q02790 459 aaKnown RBP eCLIP16.62■□□□□ 0.25
COL21A1-209ENST00000482933 UTP14AQ9BVJ6 771 aaKnown RBP16.62■□□□□ 0.25
COL21A1-209ENST00000482933 RNF123Q5XPI4 1314 aa16.61■□□□□ 0.25
COL21A1-209ENST00000482933 GNAI1P63096 354 aa16.61■□□□□ 0.25
COL21A1-209ENST00000482933 CC2D2BQ6DHV5 1058 aa16.61■□□□□ 0.25
COL21A1-209ENST00000482933 RBM17Q96I25 401 aaKnown RBP16.61■□□□□ 0.25
COL21A1-209ENST00000482933 NLRP3Q96P20 1036 aa16.61■□□□□ 0.25
COL21A1-209ENST00000482933 MBIPQ9NS73 344 aa16.61■□□□□ 0.25
COL21A1-209ENST00000482933 IFT57Q9NWB7 429 aa16.61■□□□□ 0.25
COL21A1-209ENST00000482933 CHPF2Q9P2E5 772 aa16.61■□□□□ 0.25
COL21A1-209ENST00000482933 DBF4Q9UBU7 674 aaPredicted RBP16.61■□□□□ 0.25
COL21A1-209ENST00000482933 ZNF316A6NFI3 1004 aaPredicted RBP16.6■□□□□ 0.25
COL21A1-209ENST00000482933 ZNF853P0CG23 659 aa16.6■□□□□ 0.25
COL21A1-209ENST00000482933 HOXA10P31260 410 aaPredicted RBP16.6■□□□□ 0.25
COL21A1-209ENST00000482933 TCIRG1Q13488 830 aa16.6■□□□□ 0.25
COL21A1-209ENST00000482933 SMC1BQ8NDV3 1235 aa16.6■□□□□ 0.25
COL21A1-209ENST00000482933 GRIPAP1Q4V328 841 aa16.59■□□□□ 0.25
COL21A1-209ENST00000482933 SLC10A5Q5PT55 438 aa16.59■□□□□ 0.25
COL21A1-209ENST00000482933 DUSP27Q5VZP5 1158 aa16.59■□□□□ 0.25
COL21A1-209ENST00000482933 CDAN1Q8IWY9 1227 aa16.59■□□□□ 0.25
COL21A1-209ENST00000482933 ANKRD36CQ5JPF3 1778 aa16.58■□□□□ 0.24
COL21A1-209ENST00000482933 FBXO22Q8NEZ5 403 aa16.58■□□□□ 0.24
COL21A1-209ENST00000482933 WDR90Q96KV7 1748 aa16.58■□□□□ 0.24
COL21A1-209ENST00000482933 CRAMP1Q96RY5 1269 aa16.58■□□□□ 0.24
COL21A1-209ENST00000482933 HYPKQ9NX55 129 aa16.58■□□□□ 0.24
COL21A1-209ENST00000482933 ANP32CO43423 234 aa16.57■□□□□ 0.24
COL21A1-209ENST00000482933 OLFM4Q6UX06 510 aa16.57■□□□□ 0.24
COL21A1-209ENST00000482933 ANKRD13DQ6ZTN6 518 aa16.57■□□□□ 0.24
COL21A1-209ENST00000482933 NLRP10Q86W26 655 aa16.57■□□□□ 0.24
COL21A1-209ENST00000482933 SYNE4Q8N205 404 aa16.57■□□□□ 0.24
COL21A1-209ENST00000482933 PLBD2Q8NHP8 589 aa16.57■□□□□ 0.24
COL21A1-209ENST00000482933 CHMP4AQ9BY43 222 aa16.57■□□□□ 0.24
COL21A1-209ENST00000482933 ZNF277Q9NRM2 450 aaPredicted RBP16.57■□□□□ 0.24
COL21A1-209ENST00000482933 PSMD1Q99460 953 aa16.56■□□□□ 0.24
COL21A1-209ENST00000482933 TMX4Q9H1E5 349 aaPredicted RBP16.56■□□□□ 0.24
COL21A1-209ENST00000482933 TRMT112Q9UI30 125 aaKnown RBP16.56■□□□□ 0.24
COL21A1-209ENST00000482933 POTECB2RU33 542 aa16.55■□□□□ 0.24
COL21A1-209ENST00000482933 PPEF1O14829 653 aaPredicted RBP16.55■□□□□ 0.24
COL21A1-209ENST00000482933 DDNO94850 711 aaPredicted RBP16.55■□□□□ 0.24
COL21A1-209ENST00000482933 IARSP41252 1262 aaKnown RBP16.55■□□□□ 0.24
COL21A1-209ENST00000482933 CCDC184Q52MB2 194 aa16.55■□□□□ 0.24
COL21A1-209ENST00000482933 SH3TC1Q8TE82 1336 aa16.55■□□□□ 0.24
COL21A1-209ENST00000482933 CEP350Q5VT06 3117 aa16.54■□□□□ 0.24
COL21A1-209ENST00000482933 IQCA1LA6NCM1 817 aa16.53■□□□□ 0.24
COL21A1-209ENST00000482933 DOK7Q18PE1 504 aa16.53■□□□□ 0.24
COL21A1-209ENST00000482933 CCDC27Q2M243 656 aa16.53■□□□□ 0.24
COL21A1-209ENST00000482933 JDP2Q8WYK2 163 aa16.53■□□□□ 0.24
COL21A1-209ENST00000482933 MFRPQ9BY79 579 aa16.53■□□□□ 0.24
COL21A1-209ENST00000482933 SNED1Q8TER0 1413 aa16.53■□□□□ 0.24
COL21A1-209ENST00000482933 ELL2O00472 640 aaPredicted RBP16.53■□□□□ 0.24
COL21A1-209ENST00000482933 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
COL21A1-209ENST00000482933 MRS2Q9HD23 443 aa16.53■□□□□ 0.24
COL21A1-209ENST00000482933 FZD9O00144 591 aa16.52■□□□□ 0.23
COL21A1-209ENST00000482933 BBOX1O75936 387 aa16.52■□□□□ 0.23
COL21A1-209ENST00000482933 HCLS1P14317 486 aaPredicted RBP16.52■□□□□ 0.23
COL21A1-209ENST00000482933 DDX46Q7L014 1031 aaKnown RBP16.52■□□□□ 0.23
COL21A1-209ENST00000482933 MARVELD3Q96A59 401 aa16.52■□□□□ 0.23
COL21A1-209ENST00000482933 ATP6V0A2Q9Y487 856 aa16.52■□□□□ 0.23
COL21A1-209ENST00000482933 ABCC4O15439 1325 aa16.51■□□□□ 0.23
COL21A1-209ENST00000482933 TCERG1O14776 1098 aaKnown RBP16.51■□□□□ 0.23
COL21A1-209ENST00000482933 EMP3P54852 163 aa16.51■□□□□ 0.23
COL21A1-209ENST00000482933 CCDC30Q5VVM6 783 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms