RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 NLGN1Q8N2Q7 840 aa9.88□□□□□ -0.83
TVP23B-203ENST00000482741 NBPF4Q96M43 638 aa9.88□□□□□ -0.83
TVP23B-203ENST00000482741 EMILIN1Q9Y6C2 1016 aa9.88□□□□□ -0.83
TVP23B-203ENST00000482741 DSG3P32926 999 aa9.87□□□□□ -0.83
TVP23B-203ENST00000482741 NAP1L5Q96NT1 182 aaPredicted RBP9.87□□□□□ -0.83
TVP23B-203ENST00000482741 TRIM28Q13263 835 aaKnown RBP9.87□□□□□ -0.83
TVP23B-203ENST00000482741 ZNF772Q68DY9 489 aaPredicted RBP9.87□□□□□ -0.83
TVP23B-203ENST00000482741 ZC3H4Q9UPT8 1303 aaKnown RBP9.87□□□□□ -0.83
TVP23B-203ENST00000482741 RNMTO43148 476 aaKnown RBP9.87□□□□□ -0.83
TVP23B-203ENST00000482741 MAP3K13O43283 966 aa9.87□□□□□ -0.83
TVP23B-203ENST00000482741 TCP11L2Q8N4U5 519 aa9.87□□□□□ -0.83
TVP23B-203ENST00000482741 GPHNQ9NQX3 736 aaPredicted RBP9.87□□□□□ -0.83
TVP23B-203ENST00000482741 GNAI1P63096 354 aa9.86□□□□□ -0.83
TVP23B-203ENST00000482741 NT5DC4Q86YG4 428 aa9.86□□□□□ -0.83
TVP23B-203ENST00000482741 PLA2G12BQ9BX93 195 aa9.86□□□□□ -0.83
TVP23B-203ENST00000482741 PLSCR1O15162 318 aa9.86□□□□□ -0.83
TVP23B-203ENST00000482741 GPR37L1O60883 481 aa9.86□□□□□ -0.83
TVP23B-203ENST00000482741 PLEKHO1Q53GL0 409 aaPredicted RBP9.86□□□□□ -0.83
TVP23B-203ENST00000482741 GGNBP2Q9H3C7 697 aa9.86□□□□□ -0.83
TVP23B-203ENST00000482741 SPG7Q9UQ90 795 aa9.86□□□□□ -0.83
TVP23B-203ENST00000482741 RFX7Q2KHR2 1363 aa9.86□□□□□ -0.83
TVP23B-203ENST00000482741 SLC52A2Q9HAB3 445 aa9.85□□□□□ -0.83
TVP23B-203ENST00000482741 PRKAG2Q9UGJ0 569 aa9.85□□□□□ -0.83
TVP23B-203ENST00000482741 CARMIL3Q8ND23 1372 aa9.85□□□□□ -0.83
TVP23B-203ENST00000482741 MOXD2PA6NHM9 499 aa9.85□□□□□ -0.83
TVP23B-203ENST00000482741 H3BRB1 525 aa9.85□□□□□ -0.83
TVP23B-203ENST00000482741 IL2RBP14784 551 aa9.85□□□□□ -0.83
TVP23B-203ENST00000482741 MTX1Q13505 466 aa9.85□□□□□ -0.83
TVP23B-203ENST00000482741 TUT1Q9H6E5 874 aaKnown RBP9.85□□□□□ -0.83
TVP23B-203ENST00000482741 CCDC88AQ3V6T2 1871 aa9.85□□□□□ -0.83
TVP23B-203ENST00000482741 GNAT3A8MTJ3 354 aa9.84□□□□□ -0.83
TVP23B-203ENST00000482741 TEX2Q8IWB9 1127 aa9.84□□□□□ -0.83
TVP23B-203ENST00000482741 LRRN4Q8WUT4 740 aa9.84□□□□□ -0.83
TVP23B-203ENST00000482741 CAPN10Q9HC96 672 aa9.84□□□□□ -0.83
TVP23B-203ENST00000482741 ZRANB1Q9UGI0 708 aa9.84□□□□□ -0.83
TVP23B-203ENST00000482741 FGD1P98174 961 aa9.84□□□□□ -0.83
TVP23B-203ENST00000482741 ZNF710Q8N1W2 664 aa9.84□□□□□ -0.83
TVP23B-203ENST00000482741 TMA7Q9Y2S6 64 aaKnown RBP9.84□□□□□ -0.83
TVP23B-203ENST00000482741 PKNOX2Q96KN3 472 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 MKNK1Q9BUB5 465 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 GNEQ9Y223 722 aaKnown RBP9.83□□□□□ -0.84
TVP23B-203ENST00000482741 MRPL42Q9Y6G3 142 aaKnown RBP9.83□□□□□ -0.84
TVP23B-203ENST00000482741 FANCIQ9NVI1 1328 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 MAP3K7O43318 606 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 HSP90AB2PQ58FF8 381 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 SLC27A3Q5K4L6 730 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 INTS3Q68E01 1043 aaKnown RBP9.83□□□□□ -0.84
TVP23B-203ENST00000482741 DPY19L2Q6NUT2 758 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 SGSM3Q96HU1 749 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 SPACA7Q96KW9 195 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 TEX13AQ9BXU3 409 aaPredicted RBP9.83□□□□□ -0.84
TVP23B-203ENST00000482741 USP42Q9H9J4 1324 aaKnown RBP9.83□□□□□ -0.84
TVP23B-203ENST00000482741 SBF1O95248 1867 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 RBBP6Q7Z6E9 1792 aaKnown RBP9.83□□□□□ -0.84
TVP23B-203ENST00000482741 PAX3P23760 479 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 HDLBPQ00341 1268 aaKnown RBP9.83□□□□□ -0.84
TVP23B-203ENST00000482741 IFNL2Q8IZJ0 200 aa9.83□□□□□ -0.84
TVP23B-203ENST00000482741 ZNF594Q96JF6 807 aaPredicted RBP9.83□□□□□ -0.84
TVP23B-203ENST00000482741 TRPC5Q9UL62 973 aaPredicted RBP9.83□□□□□ -0.84
TVP23B-203ENST00000482741 CDHR2Q9BYE9 1310 aa9.82□□□□□ -0.84
TVP23B-203ENST00000482741 SOWAHDA6NJG2 315 aa9.82□□□□□ -0.84
TVP23B-203ENST00000482741 SOX12O15370 315 aa9.82□□□□□ -0.84
TVP23B-203ENST00000482741 ANAPC15P60006 121 aa9.82□□□□□ -0.84
TVP23B-203ENST00000482741 MTHFSDQ2M296 383 aaKnown RBP9.82□□□□□ -0.84
TVP23B-203ENST00000482741 CRTC2Q53ET0 693 aaPredicted RBP9.82□□□□□ -0.84
TVP23B-203ENST00000482741 KLRG2A4D1S0 409 aaPredicted RBP9.82□□□□□ -0.84
TVP23B-203ENST00000482741 RIC3Q7Z5B4 369 aa9.82□□□□□ -0.84
TVP23B-203ENST00000482741 WDR90Q96KV7 1748 aa9.82□□□□□ -0.84
TVP23B-203ENST00000482741 EIF4A1P60842 406 aaKnown RBP9.81□□□□□ -0.84
TVP23B-203ENST00000482741 CNPY4Q8N129 248 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 HLA-CQ95604 372 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 RGS17Q9UGC6 210 aaPredicted RBP9.81□□□□□ -0.84
TVP23B-203ENST00000482741 NOVA2Q9UNW9 492 aaKnown RBP9.81□□□□□ -0.84
TVP23B-203ENST00000482741 CCDC85CA6NKD9 419 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 SPDYE16A6NNV3 312 aaPredicted RBP9.81□□□□□ -0.84
TVP23B-203ENST00000482741 CTDSPL2Q05D32 466 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 GOLGA2Q08379 1002 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 TCEAL1Q15170 157 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 SF3A1Q15459 793 aaKnown RBP9.81□□□□□ -0.84
TVP23B-203ENST00000482741 CYP27B1O15528 508 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 MAPK1P28482 360 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 PLPP6Q8IY26 295 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 IL17REQ8NFR9 667 aa9.81□□□□□ -0.84
TVP23B-203ENST00000482741 GJD4Q96KN9 370 aaPredicted RBP9.81□□□□□ -0.84
TVP23B-203ENST00000482741 KDM2BQ8NHM5 1336 aa9.8□□□□□ -0.84
TVP23B-203ENST00000482741 COL2A1P02458 1487 aaPredicted RBP9.8□□□□□ -0.84
TVP23B-203ENST00000482741 ERVV-1B6SEH8 477 aa9.8□□□□□ -0.84
TVP23B-203ENST00000482741 ACBD3Q9H3P7 528 aa9.8□□□□□ -0.84
TVP23B-203ENST00000482741 PCDHGB7Q9Y5F8 929 aa9.8□□□□□ -0.84
TVP23B-203ENST00000482741 CHD4Q14839 1912 aa9.8□□□□□ -0.84
TVP23B-203ENST00000482741 FOXO3O43524 673 aa9.8□□□□□ -0.84
TVP23B-203ENST00000482741 VAMP4O75379 141 aa9.8□□□□□ -0.84
TVP23B-203ENST00000482741 CANXP27824 592 aaKnown RBP9.8□□□□□ -0.84
TVP23B-203ENST00000482741 METTL3Q86U44 580 aaKnown RBP9.8□□□□□ -0.84
TVP23B-203ENST00000482741 TMUB1Q9BVT8 246 aa9.8□□□□□ -0.84
TVP23B-203ENST00000482741 TMX4Q9H1E5 349 aaPredicted RBP9.8□□□□□ -0.84
TVP23B-203ENST00000482741 LAS1LQ9Y4W2 734 aaKnown RBP9.8□□□□□ -0.84
TVP23B-203ENST00000482741 PDS5AQ29RF7 1337 aaKnown RBP9.79□□□□□ -0.84
TVP23B-203ENST00000482741 C7P10643 843 aa9.79□□□□□ -0.84
TVP23B-203ENST00000482741 LARGE2Q8N3Y3 721 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms