RNA–Protein interactions for RNA: ENST00000482270.5

LIMK2-209, Transcript of LIM domain kinase 2, humanhuman

TSL 2

Gene LIMK2, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-209ENST00000482270 TONSLQ96HA7 1378 aa12.67□□□□□ -0.38
LIMK2-209ENST00000482270 C11orf95C9JLR9 678 aaPredicted RBP12.66□□□□□ -0.38
LIMK2-209ENST00000482270 ZEB1P37275 1124 aaPredicted RBP12.66□□□□□ -0.38
LIMK2-209ENST00000482270 AGBL1Q96MI9 1066 aa12.66□□□□□ -0.38
LIMK2-209ENST00000482270 PCDHB11Q9Y5F2 797 aa12.66□□□□□ -0.38
LIMK2-209ENST00000482270 PIK3C2AO00443 1686 aa12.66□□□□□ -0.38
LIMK2-209ENST00000482270 POM121CA8CG34 1229 aa12.65□□□□□ -0.38
LIMK2-209ENST00000482270 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
LIMK2-209ENST00000482270 BMP2P12643 396 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 SEMA3FQ13275 785 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 CHRNA2Q15822 529 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 VPS72Q15906 364 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 MEIOBQ8N635 442 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 ZFP42Q96MM3 310 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 CEP126Q9P2H0 1117 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 MON2Q7Z3U7 1717 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 KIAA0232Q92628 1395 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 RGPD5Q99666 1765 aa12.64□□□□□ -0.39
LIMK2-209ENST00000482270 EVC2Q86UK5 1308 aa12.63□□□□□ -0.39
LIMK2-209ENST00000482270 SNRPBP14678 240 aaKnown RBP12.63□□□□□ -0.39
LIMK2-209ENST00000482270 ZC3H6P61129 1189 aaKnown RBP12.63□□□□□ -0.39
LIMK2-209ENST00000482270 RELBQ01201 579 aa12.63□□□□□ -0.39
LIMK2-209ENST00000482270 SCARF1Q14162 830 aa12.63□□□□□ -0.39
LIMK2-209ENST00000482270 LINC00528Q8N1L1 170 aa12.63□□□□□ -0.39
LIMK2-209ENST00000482270 ZNF592Q92610 1267 aa12.63□□□□□ -0.39
LIMK2-209ENST00000482270 PRDM11Q9NQV5 511 aa12.63□□□□□ -0.39
LIMK2-209ENST00000482270 CABP1Q9NZU7 370 aa12.63□□□□□ -0.39
LIMK2-209ENST00000482270 LMO7Q8WWI1 1683 aa12.62□□□□□ -0.39
LIMK2-209ENST00000482270 UPP2O95045 317 aa12.62□□□□□ -0.39
LIMK2-209ENST00000482270 SEPT12Q8IYM1 358 aa12.62□□□□□ -0.39
LIMK2-209ENST00000482270 ABTB2Q8N961 1025 aa12.62□□□□□ -0.39
LIMK2-209ENST00000482270 USP6P35125 1406 aa12.62□□□□□ -0.39
LIMK2-209ENST00000482270 EP400Q96L91 3159 aa12.61□□□□□ -0.39
LIMK2-209ENST00000482270 SLFNL1Q499Z3 407 aa12.61□□□□□ -0.39
LIMK2-209ENST00000482270 RNF20Q5VTR2 975 aa12.61□□□□□ -0.39
LIMK2-209ENST00000482270 CARD11Q9BXL7 1154 aa12.61□□□□□ -0.39
LIMK2-209ENST00000482270 THSD7AQ9UPZ6 1657 aa12.61□□□□□ -0.39
LIMK2-209ENST00000482270 MCCD1P59942 119 aaPredicted RBP12.6□□□□□ -0.39
LIMK2-209ENST00000482270 STRN4Q9NRL3 753 aa12.6□□□□□ -0.39
LIMK2-209ENST00000482270 CAMTA1Q9Y6Y1 1673 aa12.59□□□□□ -0.39
LIMK2-209ENST00000482270 ZBTB7CA1YPR0 619 aa12.59□□□□□ -0.39
LIMK2-209ENST00000482270 SOBPA7XYQ1 873 aa12.59□□□□□ -0.39
LIMK2-209ENST00000482270 ADD1P35611 737 aaKnown RBP12.59□□□□□ -0.39
LIMK2-209ENST00000482270 SCTRP47872 440 aa12.59□□□□□ -0.39
LIMK2-209ENST00000482270 RNF135Q8IUD6 432 aa12.59□□□□□ -0.39
LIMK2-209ENST00000482270 CCDC85AQ96PX6 553 aaPredicted RBP12.59□□□□□ -0.39
LIMK2-209ENST00000482270 SENP2Q9HC62 589 aa12.59□□□□□ -0.39
LIMK2-209ENST00000482270 GTF3C3Q9Y5Q9 886 aa12.59□□□□□ -0.39
LIMK2-209ENST00000482270 LILRA1O75019 489 aa12.58□□□□□ -0.4
LIMK2-209ENST00000482270 TSGA10IPQ3SY00 556 aa12.58□□□□□ -0.4
LIMK2-209ENST00000482270 TRIM47Q96LD4 638 aa12.58□□□□□ -0.4
LIMK2-209ENST00000482270 ZNF395Q9H8N7 513 aaPredicted RBP12.58□□□□□ -0.4
LIMK2-209ENST00000482270 USP19O94966 1318 aa12.58□□□□□ -0.4
LIMK2-209ENST00000482270 WNK3Q9BYP7 1800 aa12.58□□□□□ -0.4
LIMK2-209ENST00000482270 SLIT3O75094 1523 aa12.57□□□□□ -0.4
LIMK2-209ENST00000482270 LTN1O94822 1766 aa12.57□□□□□ -0.4
LIMK2-209ENST00000482270 COL18A1P39060 1754 aa12.57□□□□□ -0.4
LIMK2-209ENST00000482270 OXLD1Q5BKU9 147 aa12.57□□□□□ -0.4
LIMK2-209ENST00000482270 CDCA7Q9BWT1 371 aaPredicted RBP12.57□□□□□ -0.4
LIMK2-209ENST00000482270 SPATA31A5Q5VU36 1347 aa12.57□□□□□ -0.4
LIMK2-209ENST00000482270 SPATA31A7Q8IWB4 1347 aa12.57□□□□□ -0.4
LIMK2-209ENST00000482270 RGPD1P0DJD0 1748 aa12.57□□□□□ -0.4
LIMK2-209ENST00000482270 SSH2Q76I76 1423 aa12.56□□□□□ -0.4
LIMK2-209ENST00000482270 PIK3CDO00329 1044 aa12.56□□□□□ -0.4
LIMK2-209ENST00000482270 FAM182BQ5T319 152 aa12.56□□□□□ -0.4
LIMK2-209ENST00000482270 KRT27Q7Z3Y8 459 aa12.56□□□□□ -0.4
LIMK2-209ENST00000482270 NLRP13Q86W25 1043 aa12.56□□□□□ -0.4
LIMK2-209ENST00000482270 TSEN34Q9BSV6 310 aaKnown RBP12.56□□□□□ -0.4
LIMK2-209ENST00000482270 USP35Q9P2H5 1018 aa12.56□□□□□ -0.4
LIMK2-209ENST00000482270 DOLKQ9UPQ8 538 aa12.56□□□□□ -0.4
LIMK2-209ENST00000482270 TNS1Q9HBL0 1735 aaKnown RBP12.56□□□□□ -0.4
LIMK2-209ENST00000482270 ADH1AP07327 375 aa12.55□□□□□ -0.4
LIMK2-209ENST00000482270 Q6ZVU0 165 aa12.55□□□□□ -0.4
LIMK2-209ENST00000482270 KTN1Q86UP2 1357 aaKnown RBP12.55□□□□□ -0.4
LIMK2-209ENST00000482270 SBNO2Q9Y2G9 1366 aa12.55□□□□□ -0.4
LIMK2-209ENST00000482270 GCP02774 474 aa12.54□□□□□ -0.4
LIMK2-209ENST00000482270 EVA1CP58658 441 aa12.54□□□□□ -0.4
LIMK2-209ENST00000482270 CC2D2BQ6DHV5 1058 aa12.54□□□□□ -0.4
LIMK2-209ENST00000482270 ADAMTS19Q8TE59 1207 aa12.54□□□□□ -0.4
LIMK2-209ENST00000482270 KIFC2Q96AC6 838 aa12.54□□□□□ -0.4
LIMK2-209ENST00000482270 SPATA31A1Q5TZJ5 1347 aa12.54□□□□□ -0.4
LIMK2-209ENST00000482270 USP54Q70EL1 1684 aa12.54□□□□□ -0.4
LIMK2-209ENST00000482270 BRD4O60885 1362 aaPredicted RBP12.54□□□□□ -0.4
LIMK2-209ENST00000482270 CPDO75976 1380 aa12.54□□□□□ -0.4
LIMK2-209ENST00000482270 BLMP54132 1417 aaPredicted RBP12.54□□□□□ -0.4
LIMK2-209ENST00000482270 CPSF1Q10570 1443 aaKnown RBP12.54□□□□□ -0.4
LIMK2-209ENST00000482270 COL5A2P05997 1499 aaPredicted RBP12.53□□□□□ -0.4
LIMK2-209ENST00000482270 CD163L1Q9NR16 1453 aa12.53□□□□□ -0.4
LIMK2-209ENST00000482270 SOX11P35716 441 aa12.53□□□□□ -0.4
LIMK2-209ENST00000482270 LARP1Q6PKG0 1096 aaKnown RBP12.53□□□□□ -0.4
LIMK2-209ENST00000482270 TMC1Q8TDI8 760 aa12.53□□□□□ -0.4
LIMK2-209ENST00000482270 INSM2Q96T92 566 aaPredicted RBP12.53□□□□□ -0.4
LIMK2-209ENST00000482270 TTC21BQ7Z4L5 1316 aa12.53□□□□□ -0.4
LIMK2-209ENST00000482270 PARP4Q9UKK3 1724 aaKnown RBP12.52□□□□□ -0.41
LIMK2-209ENST00000482270 DEFB132Q7Z7B7 95 aa12.52□□□□□ -0.41
LIMK2-209ENST00000482270 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.52□□□□□ -0.41
LIMK2-209ENST00000482270 POLMQ9NP87 494 aaPredicted RBP12.52□□□□□ -0.41
LIMK2-209ENST00000482270 NFAT5O94916 1531 aa12.52□□□□□ -0.41
LIMK2-209ENST00000482270 ST20-MTHFSA0A0A6YYL1 179 aa12.51□□□□□ -0.41
LIMK2-209ENST00000482270 FIGNL2A6NMB9 653 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms