RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ZNF34Q8IZ26 560 aa19.9■□□□□ 0.78
HDAC6-224ENST00000481929 ABCC4O15439 1325 aa19.9■□□□□ 0.78
HDAC6-224ENST00000481929 FAM155AB1AL88 458 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-224ENST00000481929 MYL6BP14649 208 aa19.89■□□□□ 0.77
HDAC6-224ENST00000481929 PARP10Q53GL7 1025 aa19.89■□□□□ 0.77
HDAC6-224ENST00000481929 MPNDQ8N594 471 aa19.89■□□□□ 0.77
HDAC6-224ENST00000481929 CCDC102AQ96A19 550 aa19.89■□□□□ 0.77
HDAC6-224ENST00000481929 GBA2Q9HCG7 927 aaPredicted RBP19.89■□□□□ 0.77
HDAC6-224ENST00000481929 MIS18AQ9NYP9 233 aa19.89■□□□□ 0.77
HDAC6-224ENST00000481929 TRPA1O75762 1119 aa19.88■□□□□ 0.77
HDAC6-224ENST00000481929 U2AF1L5P0DN76 240 aaPredicted RBP19.88■□□□□ 0.77
HDAC6-224ENST00000481929 U2AF1Q01081 240 aaKnown RBP eCLIP19.88■□□□□ 0.77
HDAC6-224ENST00000481929 KIF23Q02241 960 aaPredicted RBP19.88■□□□□ 0.77
HDAC6-224ENST00000481929 GIGYF2Q6Y7W6 1299 aaKnown RBP19.88■□□□□ 0.77
HDAC6-224ENST00000481929 MICALL2Q8IY33 904 aa19.88■□□□□ 0.77
HDAC6-224ENST00000481929 C2orf69Q8N8R5 385 aa19.88■□□□□ 0.77
HDAC6-224ENST00000481929 SHTN1A0MZ66 631 aa19.87■□□□□ 0.77
HDAC6-224ENST00000481929 BBOX1O75936 387 aa19.87■□□□□ 0.77
HDAC6-224ENST00000481929 KRT26Q7Z3Y9 468 aa19.87■□□□□ 0.77
HDAC6-224ENST00000481929 CTU1Q7Z7A3 348 aaKnown RBP19.87■□□□□ 0.77
HDAC6-224ENST00000481929 SP8Q8IXZ3 490 aa19.87■□□□□ 0.77
HDAC6-224ENST00000481929 RNF186Q9NXI6 227 aa19.87■□□□□ 0.77
HDAC6-224ENST00000481929 ZNF157P51786 506 aaPredicted RBP19.86■□□□□ 0.77
HDAC6-224ENST00000481929 DLK2Q6UY11 383 aa19.86■□□□□ 0.77
HDAC6-224ENST00000481929 PNISRQ8TF01 805 aaKnown RBP19.86■□□□□ 0.77
HDAC6-224ENST00000481929 PCGF6Q9BYE7 350 aa19.86■□□□□ 0.77
HDAC6-224ENST00000481929 UTP14AQ9BVJ6 771 aaKnown RBP19.85■□□□□ 0.77
HDAC6-224ENST00000481929 YDJCA8MPS7 323 aa19.84■□□□□ 0.77
HDAC6-224ENST00000481929 SLC10A5Q5PT55 438 aa19.84■□□□□ 0.77
HDAC6-224ENST00000481929 DPF2Q92785 391 aa19.84■□□□□ 0.77
HDAC6-224ENST00000481929 AKAP11Q9UKA4 1901 aa19.84■□□□□ 0.77
HDAC6-224ENST00000481929 TBC1D10BQ4KMP7 808 aaPredicted RBP19.83■□□□□ 0.77
HDAC6-224ENST00000481929 SAMD7Q7Z3H4 446 aa19.83■□□□□ 0.77
HDAC6-224ENST00000481929 DCPSQ96C86 337 aaKnown RBP19.83■□□□□ 0.77
HDAC6-224ENST00000481929 ZBTB12Q9Y330 459 aaPredicted RBP19.83■□□□□ 0.77
HDAC6-224ENST00000481929 SLC10A3P09131 477 aa19.82■□□□□ 0.76
HDAC6-224ENST00000481929 EIF4A1P60842 406 aaKnown RBP19.82■□□□□ 0.76
HDAC6-224ENST00000481929 DDX46Q7L014 1031 aaKnown RBP19.82■□□□□ 0.76
HDAC6-224ENST00000481929 KDM3BQ7LBC6 1761 aa19.82■□□□□ 0.76
HDAC6-224ENST00000481929 ERBB4Q15303 1308 aa19.81■□□□□ 0.76
HDAC6-224ENST00000481929 ADM5C9JUS6 153 aa19.81■□□□□ 0.76
HDAC6-224ENST00000481929 CSRNP1Q96S65 589 aa19.81■□□□□ 0.76
HDAC6-224ENST00000481929 HPS5Q9UPZ3 1129 aa19.81■□□□□ 0.76
HDAC6-224ENST00000481929 PSMD14O00487 310 aa19.8■□□□□ 0.76
HDAC6-224ENST00000481929 GRAPQ13588 217 aa19.8■□□□□ 0.76
HDAC6-224ENST00000481929 GRAPLQ8TC17 118 aaPredicted RBP19.8■□□□□ 0.76
HDAC6-224ENST00000481929 DUOX1Q9NRD9 1551 aa19.79■□□□□ 0.76
HDAC6-224ENST00000481929 EGFRP00533 1210 aa19.79■□□□□ 0.76
HDAC6-224ENST00000481929 RPS12P25398 132 aaKnown RBP19.79■□□□□ 0.76
HDAC6-224ENST00000481929 TMC4Q7Z404 712 aa19.79■□□□□ 0.76
HDAC6-224ENST00000481929 REM2Q8IYK8 340 aaPredicted RBP19.79■□□□□ 0.76
HDAC6-224ENST00000481929 LAMB2P55268 1798 aa19.78■□□□□ 0.76
HDAC6-224ENST00000481929 ANKRD36CQ5JPF3 1778 aa19.78■□□□□ 0.76
HDAC6-224ENST00000481929 HCLS1P14317 486 aaPredicted RBP19.78■□□□□ 0.76
HDAC6-224ENST00000481929 PKN2Q16513 984 aaKnown RBP19.78■□□□□ 0.76
HDAC6-224ENST00000481929 RBM26Q5T8P6 1007 aaKnown RBP19.78■□□□□ 0.76
HDAC6-224ENST00000481929 POLR2AP24928 1970 aaKnown RBP19.77■□□□□ 0.76
HDAC6-224ENST00000481929 NEFMP07197 916 aa19.77■□□□□ 0.76
HDAC6-224ENST00000481929 WASHC4Q2M389 1173 aa19.77■□□□□ 0.76
HDAC6-224ENST00000481929 SULF1Q8IWU6 871 aa19.77■□□□□ 0.76
HDAC6-224ENST00000481929 GCC1Q96CN9 775 aa19.77■□□□□ 0.76
HDAC6-224ENST00000481929 DBNDD1Q9H9R9 158 aa19.77■□□□□ 0.76
HDAC6-224ENST00000481929 HDAC9Q9UKV0 1011 aa19.77■□□□□ 0.76
HDAC6-224ENST00000481929 KIF4BQ2VIQ3 1234 aa19.76■□□□□ 0.75
HDAC6-224ENST00000481929 THUMPD2Q9BTF0 503 aaKnown RBP19.76■□□□□ 0.75
HDAC6-224ENST00000481929 GGA3Q9NZ52 723 aa19.76■□□□□ 0.75
HDAC6-224ENST00000481929 HSP90AB3PQ58FF7 597 aa19.75■□□□□ 0.75
HDAC6-224ENST00000481929 RASAL3Q86YV0 1011 aa19.75■□□□□ 0.75
HDAC6-224ENST00000481929 LRRC37AA6NMS7 1700 aa19.74■□□□□ 0.75
HDAC6-224ENST00000481929 NLRP10Q86W26 655 aa19.74■□□□□ 0.75
HDAC6-224ENST00000481929 CDCA5Q96FF9 252 aa19.74■□□□□ 0.75
HDAC6-224ENST00000481929 TRMT112Q9UI30 125 aaKnown RBP19.74■□□□□ 0.75
HDAC6-224ENST00000481929 SH3TC1Q8TE82 1336 aa19.74■□□□□ 0.75
HDAC6-224ENST00000481929 RIMBP2O15034 1052 aa19.73■□□□□ 0.75
HDAC6-224ENST00000481929 ECE2O60344 883 aa19.73■□□□□ 0.75
HDAC6-224ENST00000481929 LRP10Q7Z4F1 713 aa19.73■□□□□ 0.75
HDAC6-224ENST00000481929 NSFL1CQ9UNZ2 370 aaKnown RBP19.73■□□□□ 0.75
HDAC6-224ENST00000481929 C6orf229H3BNL8 230 aa19.72■□□□□ 0.75
HDAC6-224ENST00000481929 PPP2R1AP30153 589 aa19.72■□□□□ 0.75
HDAC6-224ENST00000481929 PDIA6Q15084 440 aa19.72■□□□□ 0.75
HDAC6-224ENST00000481929 DLG5Q8TDM6 1919 aa19.72■□□□□ 0.75
HDAC6-224ENST00000481929 RTL9Q8NET4 1388 aa19.71■□□□□ 0.75
HDAC6-224ENST00000481929 EIF2S2P20042 333 aaKnown RBP19.71■□□□□ 0.75
HDAC6-224ENST00000481929 FKBP1BP68106 108 aa19.71■□□□□ 0.75
HDAC6-224ENST00000481929 ZNF296Q8WUU4 475 aaPredicted RBP19.71■□□□□ 0.75
HDAC6-224ENST00000481929 EYA3Q99504 573 aa19.71■□□□□ 0.75
HDAC6-224ENST00000481929 TAF1P21675 1872 aa19.71■□□□□ 0.75
HDAC6-224ENST00000481929 DDX60Q8IY21 1712 aaKnown RBP19.71■□□□□ 0.75
HDAC6-224ENST00000481929 ANXA1P04083 346 aa19.7■□□□□ 0.74
HDAC6-224ENST00000481929 DOK7Q18PE1 504 aa19.7■□□□□ 0.74
HDAC6-224ENST00000481929 KCNQ5Q9NR82 932 aa19.7■□□□□ 0.74
HDAC6-224ENST00000481929 ASTN2O75129 1339 aaPredicted RBP19.7■□□□□ 0.74
HDAC6-224ENST00000481929 TBC1D8O95759 1140 aa19.69■□□□□ 0.74
HDAC6-224ENST00000481929 PROSER3Q2NL68 480 aa19.69■□□□□ 0.74
HDAC6-224ENST00000481929 POLLQ9UGP5 575 aa19.69■□□□□ 0.74
HDAC6-224ENST00000481929 PAPPA2Q9BXP8 1791 aa19.69■□□□□ 0.74
HDAC6-224ENST00000481929 AIMP1Q12904 312 aaKnown RBP19.68■□□□□ 0.74
HDAC6-224ENST00000481929 TCIRG1Q13488 830 aa19.68■□□□□ 0.74
HDAC6-224ENST00000481929 NFE2L2Q16236 605 aa19.68■□□□□ 0.74
HDAC6-224ENST00000481929 ANGEL2Q5VTE6 544 aaKnown RBP19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms