RNA–Protein interactions for RNA: ENST00000481057.1

CBX3-206, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 860 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-206ENST00000481057 SUSD3Q96L08 255 aa11.02□□□□□ -0.65
CBX3-206ENST00000481057 KLK14Q9P0G3 267 aa11.02□□□□□ -0.65
CBX3-206ENST00000481057 TERTO14746 1132 aaKnown RBP11.01□□□□□ -0.65
CBX3-206ENST00000481057 TNFRSF10BO14763 440 aa11.01□□□□□ -0.65
CBX3-206ENST00000481057 UBAP2LQ14157 1087 aaKnown RBP11.01□□□□□ -0.65
CBX3-206ENST00000481057 LRRC69Q6ZNQ3 347 aa11.01□□□□□ -0.65
CBX3-206ENST00000481057 HELQQ8TDG4 1101 aa11.01□□□□□ -0.65
CBX3-206ENST00000481057 GNEQ9Y223 722 aaKnown RBP11.01□□□□□ -0.65
CBX3-206ENST00000481057 LRP5O75197 1615 aa11.01□□□□□ -0.65
CBX3-206ENST00000481057 CDC14CA4D256 554 aa11□□□□□ -0.65
CBX3-206ENST00000481057 SERPINB4P48594 390 aa11□□□□□ -0.65
CBX3-206ENST00000481057 C11orf91Q3C1V1 193 aa11□□□□□ -0.65
CBX3-206ENST00000481057 KCTD17Q8N5Z5 321 aa11□□□□□ -0.65
CBX3-206ENST00000481057 ZNF280CQ8ND82 737 aa11□□□□□ -0.65
CBX3-206ENST00000481057 CCER1Q8TC90 406 aaPredicted RBP11□□□□□ -0.65
CBX3-206ENST00000481057 BCS1LQ9Y276 419 aa11□□□□□ -0.65
CBX3-206ENST00000481057 GJA3Q9Y6H8 435 aa11□□□□□ -0.65
CBX3-206ENST00000481057 DNMT3AQ9Y6K1 912 aaPredicted RBP11□□□□□ -0.65
CBX3-206ENST00000481057 RNF17Q9BXT8 1623 aaKnown RBP10.99□□□□□ -0.65
CBX3-206ENST00000481057 SAMD5Q5TGI4 173 aa10.99□□□□□ -0.65
CBX3-206ENST00000481057 VWA5B2Q8N398 1253 aa10.99□□□□□ -0.65
CBX3-206ENST00000481057 NEUROD4Q9HD90 331 aa10.99□□□□□ -0.65
CBX3-206ENST00000481057 ANKIB1Q9P2G1 1089 aa10.99□□□□□ -0.65
CBX3-206ENST00000481057 IGF1RP08069 1367 aa10.99□□□□□ -0.65
CBX3-206ENST00000481057 NPATQ14207 1427 aa10.99□□□□□ -0.65
CBX3-206ENST00000481057 ABCA8O94911 1581 aa10.99□□□□□ -0.65
CBX3-206ENST00000481057 BIVM-ERCC5R4GMW8 1640 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 SUPT6HQ7KZ85 1726 aaKnown RBP10.98□□□□□ -0.65
CBX3-206ENST00000481057 TGFBR3LH3BV60 316 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 VSIG8P0DPA2 414 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 IER5Q5VY09 327 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 FIGNL1Q6PIW4 674 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 SV2AQ7L0J3 742 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 AEBP1Q8IUX7 1158 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 GTPBP3Q969Y2 492 aaKnown RBP10.98□□□□□ -0.65
CBX3-206ENST00000481057 ZCCHC2Q9C0B9 1178 aaKnown RBP10.98□□□□□ -0.65
CBX3-206ENST00000481057 EGFL7Q9UHF1 273 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 VWDEQ8N2E2 1590 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 RAPGEF6Q8TEU7 1601 aa10.98□□□□□ -0.65
CBX3-206ENST00000481057 PATL2C9JE40 543 aaKnown RBP10.97□□□□□ -0.65
CBX3-206ENST00000481057 ABL1P00519 1130 aa10.97□□□□□ -0.65
CBX3-206ENST00000481057 ZNF211Q13398 564 aaPredicted RBP10.97□□□□□ -0.65
CBX3-206ENST00000481057 FAM135BQ49AJ0 1406 aa10.96□□□□□ -0.65
CBX3-206ENST00000481057 NFX1Q12986 1120 aaKnown RBP10.96□□□□□ -0.65
CBX3-206ENST00000481057 FAM26DQ5JW98 314 aa10.96□□□□□ -0.65
CBX3-206ENST00000481057 SLC16A10Q8TF71 515 aa10.96□□□□□ -0.65
CBX3-206ENST00000481057 IFT43Q96FT9 208 aa10.96□□□□□ -0.65
CBX3-206ENST00000481057 NDFIP2Q9NV92 336 aa10.96□□□□□ -0.65
CBX3-206ENST00000481057 IVNS1ABPQ9Y6Y0 642 aa10.96□□□□□ -0.65
CBX3-206ENST00000481057 ERBB4Q15303 1308 aa10.95□□□□□ -0.66
CBX3-206ENST00000481057 ATXN7O15265 892 aaPredicted RBP10.95□□□□□ -0.66
CBX3-206ENST00000481057 FAM157BP0CG42 384 aa10.95□□□□□ -0.66
CBX3-206ENST00000481057 BRD2P25440 801 aaKnown RBP10.95□□□□□ -0.66
CBX3-206ENST00000481057 TYRO3Q06418 890 aa10.95□□□□□ -0.66
CBX3-206ENST00000481057 MTMR3Q13615 1198 aa10.95□□□□□ -0.66
CBX3-206ENST00000481057 MEX3CQ5U5Q3 659 aaKnown RBP10.95□□□□□ -0.66
CBX3-206ENST00000481057 STIM2Q9P246 746 aa10.95□□□□□ -0.66
CBX3-206ENST00000481057 DMGDHQ9UI17 866 aaKnown RBP10.95□□□□□ -0.66
CBX3-206ENST00000481057 PCDHGC4Q9Y5F7 938 aa10.95□□□□□ -0.66
CBX3-206ENST00000481057 UGGT2Q9NYU1 1516 aa10.94□□□□□ -0.66
CBX3-206ENST00000481057 SF3B2Q13435 895 aaKnown RBP10.94□□□□□ -0.66
CBX3-206ENST00000481057 BTLAQ7Z6A9 289 aa10.94□□□□□ -0.66
CBX3-206ENST00000481057 ETFBKMTQ8IXQ9 262 aa10.94□□□□□ -0.66
CBX3-206ENST00000481057 ANO2Q9NQ90 1003 aa10.94□□□□□ -0.66
CBX3-206ENST00000481057 ZNF142P52746 1687 aaPredicted RBP10.94□□□□□ -0.66
CBX3-206ENST00000481057 DCDC2BA2VCK2 349 aa10.93□□□□□ -0.66
CBX3-206ENST00000481057 GPR25O00155 361 aa10.93□□□□□ -0.66
CBX3-206ENST00000481057 BNIP3LO60238 219 aa10.93□□□□□ -0.66
CBX3-206ENST00000481057 FOXR1Q6PIV2 292 aa10.93□□□□□ -0.66
CBX3-206ENST00000481057 GPR161Q8N6U8 529 aaKnown RBP10.93□□□□□ -0.66
CBX3-206ENST00000481057 ABTB2Q8N961 1025 aa10.93□□□□□ -0.66
CBX3-206ENST00000481057 ZNF775Q96BV0 537 aaPredicted RBP10.93□□□□□ -0.66
CBX3-206ENST00000481057 CEP170BQ9Y4F5 1589 aaPredicted RBP10.93□□□□□ -0.66
CBX3-206ENST00000481057 ATP10BO94823 1461 aa10.93□□□□□ -0.66
CBX3-206ENST00000481057 RGS12O14924 1447 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 H3BRB1 525 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 EFSO43281 561 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 ICMTO60725 284 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 NPR3P17342 541 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 C1QTNF8P60827 252 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 FKBP4Q02790 459 aaKnown RBP eCLIP10.92□□□□□ -0.66
CBX3-206ENST00000481057 TREML1Q86YW5 311 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 ABHD17AQ96GS6 310 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 CEP63Q96MT8 703 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 TRERF1Q96PN7 1200 aa10.92□□□□□ -0.66
CBX3-206ENST00000481057 TUT1Q9H6E5 874 aaKnown RBP10.92□□□□□ -0.66
CBX3-206ENST00000481057 ATXN7L1Q9ULK2 861 aaPredicted RBP10.92□□□□□ -0.66
CBX3-206ENST00000481057 MICAL2O94851 1124 aa10.91□□□□□ -0.66
CBX3-206ENST00000481057 MPSTP25325 297 aa10.91□□□□□ -0.66
CBX3-206ENST00000481057 IDH3AP50213 366 aa10.91□□□□□ -0.66
CBX3-206ENST00000481057 TNP2Q05952 138 aa10.91□□□□□ -0.66
CBX3-206ENST00000481057 IRF7Q92985 503 aa10.91□□□□□ -0.66
CBX3-206ENST00000481057 CFHR5Q9BXR6 569 aa10.91□□□□□ -0.66
CBX3-206ENST00000481057 PHF24Q9UPV7 400 aa10.91□□□□□ -0.66
CBX3-206ENST00000481057 CNTLNQ9NXG0 1405 aa10.91□□□□□ -0.66
CBX3-206ENST00000481057 MYO3AQ8NEV4 1616 aa10.91□□□□□ -0.66
CBX3-206ENST00000481057 JCADQ9P266 1359 aa10.9□□□□□ -0.66
CBX3-206ENST00000481057 NEURL4Q96JN8 1562 aa10.9□□□□□ -0.66
CBX3-206ENST00000481057 CFAP74Q9C0B2 1584 aa10.9□□□□□ -0.66
CBX3-206ENST00000481057 SOWAHDA6NJG2 315 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms