RNA–Protein interactions for RNA: ENST00000479458.1

HMGCL-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-205ENST00000479458 CLEC4GQ6UXB4 293 aa10.07□□□□□ -0.8
HMGCL-205ENST00000479458 IFNLR1Q8IU57 520 aaPredicted RBP10.07□□□□□ -0.8
HMGCL-205ENST00000479458 CCDC102AQ96A19 550 aa10.07□□□□□ -0.8
HMGCL-205ENST00000479458 CDHR2Q9BYE9 1310 aa10.07□□□□□ -0.8
HMGCL-205ENST00000479458 PRAMEF22A3QJZ6 481 aa10.06□□□□□ -0.8
HMGCL-205ENST00000479458 SNRPA1P09661 255 aaKnown RBP10.06□□□□□ -0.8
HMGCL-205ENST00000479458 FXR2P51116 673 aaKnown RBP eCLIP10.06□□□□□ -0.8
HMGCL-205ENST00000479458 EIF4A1P60842 406 aaKnown RBP10.06□□□□□ -0.8
HMGCL-205ENST00000479458 NOM1Q5C9Z4 860 aaKnown RBP10.06□□□□□ -0.8
HMGCL-205ENST00000479458 CDC37L1Q7L3B6 337 aa10.06□□□□□ -0.8
HMGCL-205ENST00000479458 ZIC5Q96T25 663 aa10.06□□□□□ -0.8
HMGCL-205ENST00000479458 VPS33BQ9H267 617 aa10.06□□□□□ -0.8
HMGCL-205ENST00000479458 RNF186Q9NXI6 227 aa10.06□□□□□ -0.8
HMGCL-205ENST00000479458 GPRC5DQ9NZD1 345 aa10.06□□□□□ -0.8
HMGCL-205ENST00000479458 USP16Q9Y5T5 823 aa10.06□□□□□ -0.8
HMGCL-205ENST00000479458 LAMB4A4D0S4 1761 aa10.06□□□□□ -0.8
HMGCL-205ENST00000479458 COL4A5P29400 1685 aa10.06□□□□□ -0.8
HMGCL-205ENST00000479458 A0A0C4DFX4 3053 aa10.05□□□□□ -0.8
HMGCL-205ENST00000479458 KIAA0100Q14667 2235 aaKnown RBP10.05□□□□□ -0.8
HMGCL-205ENST00000479458 DLL1O00548 723 aa10.05□□□□□ -0.8
HMGCL-205ENST00000479458 A1BGP04217 495 aa10.05□□□□□ -0.8
HMGCL-205ENST00000479458 CANXP27824 592 aaKnown RBP10.05□□□□□ -0.8
HMGCL-205ENST00000479458 PLCD3Q8N3E9 789 aa10.05□□□□□ -0.8
HMGCL-205ENST00000479458 CCDC24Q8N4L8 307 aa10.05□□□□□ -0.8
HMGCL-205ENST00000479458 BABAM1Q9NWV8 329 aa10.05□□□□□ -0.8
HMGCL-205ENST00000479458 TSPYL4Q9UJ04 414 aa10.05□□□□□ -0.8
HMGCL-205ENST00000479458 RBBP6Q7Z6E9 1792 aaKnown RBP10.04□□□□□ -0.8
HMGCL-205ENST00000479458 CAMTA2O94983 1202 aa10.04□□□□□ -0.8
HMGCL-205ENST00000479458 RGMBQ6NW40 437 aa10.04□□□□□ -0.8
HMGCL-205ENST00000479458 GJA3Q9Y6H8 435 aa10.04□□□□□ -0.8
HMGCL-205ENST00000479458 TRIOBPQ9H2D6 2365 aa10.03□□□□□ -0.8
HMGCL-205ENST00000479458 CHL1O00533 1208 aa10.03□□□□□ -0.8
HMGCL-205ENST00000479458 NPHP1O15259 732 aa10.03□□□□□ -0.8
HMGCL-205ENST00000479458 TRPA1O75762 1119 aa10.03□□□□□ -0.8
HMGCL-205ENST00000479458 HUNKP57058 714 aa10.03□□□□□ -0.8
HMGCL-205ENST00000479458 GLIS2Q9BZE0 524 aaPredicted RBP10.03□□□□□ -0.8
HMGCL-205ENST00000479458 POLR2AP24928 1970 aaKnown RBP10.03□□□□□ -0.8
HMGCL-205ENST00000479458 NBPF26B4DH59 902 aa10.02□□□□□ -0.81
HMGCL-205ENST00000479458 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-205ENST00000479458 KIF23Q02241 960 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-205ENST00000479458 CRY2Q49AN0 593 aa10.02□□□□□ -0.81
HMGCL-205ENST00000479458 NBPF10Q6P3W6 841 aaKnown RBP10.02□□□□□ -0.81
HMGCL-205ENST00000479458 FBXO46Q6PJ61 603 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-205ENST00000479458 TPTE2Q6XPS3 522 aa10.02□□□□□ -0.81
HMGCL-205ENST00000479458 NBPF5PQ86XG9 351 aaPredicted RBP10.02□□□□□ -0.81
HMGCL-205ENST00000479458 TBC1D2BQ9UPU7 963 aa10.02□□□□□ -0.81
HMGCL-205ENST00000479458 CCDC27Q2M243 656 aa10.01□□□□□ -0.81
HMGCL-205ENST00000479458 OLFM4Q6UX06 510 aa10.01□□□□□ -0.81
HMGCL-205ENST00000479458 CSRNP1Q96S65 589 aa10.01□□□□□ -0.81
HMGCL-205ENST00000479458 ZNF330Q9Y3S2 320 aaPredicted RBP10.01□□□□□ -0.81
HMGCL-205ENST00000479458 BRCA2P51587 3418 aa10.01□□□□□ -0.81
HMGCL-205ENST00000479458 CEP290O15078 2479 aa10□□□□□ -0.81
HMGCL-205ENST00000479458 SLC10A3P09131 477 aa10□□□□□ -0.81
HMGCL-205ENST00000479458 ZNF853P0CG23 659 aa10□□□□□ -0.81
HMGCL-205ENST00000479458 CALD1Q05682 793 aaKnown RBP10□□□□□ -0.81
HMGCL-205ENST00000479458 INTS3Q68E01 1043 aaKnown RBP10□□□□□ -0.81
HMGCL-205ENST00000479458 NPM2Q86SE8 214 aaKnown RBP10□□□□□ -0.81
HMGCL-205ENST00000479458 FAM9BQ8IZU0 186 aa10□□□□□ -0.81
HMGCL-205ENST00000479458 LARGE2Q8N3Y3 721 aa10□□□□□ -0.81
HMGCL-205ENST00000479458 PIP4P2Q8N4L2 257 aa10□□□□□ -0.81
HMGCL-205ENST00000479458 IFT57Q9NWB7 429 aa10□□□□□ -0.81
HMGCL-205ENST00000479458 LAS1LQ9Y4W2 734 aaKnown RBP10□□□□□ -0.81
HMGCL-205ENST00000479458 COL6A3P12111 3177 aa10□□□□□ -0.81
HMGCL-205ENST00000479458 CENPFP49454 3210 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 HTTP42858 3142 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 HOXA10P31260 410 aaPredicted RBP9.99□□□□□ -0.81
HMGCL-205ENST00000479458 MNX1P50219 401 aaPredicted RBP9.99□□□□□ -0.81
HMGCL-205ENST00000479458 HIRAP54198 1017 aaPredicted RBP9.99□□□□□ -0.81
HMGCL-205ENST00000479458 KRT24Q2M2I5 525 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 DZIP3Q86Y13 1208 aaKnown RBP9.99□□□□□ -0.81
HMGCL-205ENST00000479458 WWC1Q8IX03 1113 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 NIM1KQ8IY84 436 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 C2orf69Q8N8R5 385 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 GBA2Q9HCG7 927 aaPredicted RBP9.99□□□□□ -0.81
HMGCL-205ENST00000479458 MBIPQ9NS73 344 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 ZNF652Q9Y2D9 606 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 ERBB4Q15303 1308 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 RIC1Q4ADV7 1423 aa9.99□□□□□ -0.81
HMGCL-205ENST00000479458 ZNF157P51786 506 aaPredicted RBP9.98□□□□□ -0.81
HMGCL-205ENST00000479458 GNAI1P63096 354 aa9.98□□□□□ -0.81
HMGCL-205ENST00000479458 CFHR5Q9BXR6 569 aa9.98□□□□□ -0.81
HMGCL-205ENST00000479458 ZNF408Q9H9D4 720 aa9.98□□□□□ -0.81
HMGCL-205ENST00000479458 HDAC9Q9UKV0 1011 aa9.98□□□□□ -0.81
HMGCL-205ENST00000479458 ZNRF3Q9ULT6 936 aa9.98□□□□□ -0.81
HMGCL-205ENST00000479458 CCER2I3L3R5 266 aa9.97□□□□□ -0.81
HMGCL-205ENST00000479458 HOXB7P09629 217 aa9.97□□□□□ -0.81
HMGCL-205ENST00000479458 EIF2S2P20042 333 aaKnown RBP9.97□□□□□ -0.81
HMGCL-205ENST00000479458 CXCL9Q07325 125 aa9.97□□□□□ -0.81
HMGCL-205ENST00000479458 PDIA6Q15084 440 aa9.97□□□□□ -0.81
HMGCL-205ENST00000479458 LRP10Q7Z4F1 713 aa9.97□□□□□ -0.81
HMGCL-205ENST00000479458 SLC17A8Q8NDX2 589 aa9.97□□□□□ -0.81
HMGCL-205ENST00000479458 ZNF296Q8WUU4 475 aaPredicted RBP9.97□□□□□ -0.81
HMGCL-205ENST00000479458 PRKAR2AP13861 404 aaKnown RBP9.96□□□□□ -0.82
HMGCL-205ENST00000479458 GMPSP49915 693 aaPredicted RBP9.96□□□□□ -0.82
HMGCL-205ENST00000479458 TNIP1Q15025 636 aa9.96□□□□□ -0.82
HMGCL-205ENST00000479458 PROSER3Q2NL68 480 aa9.96□□□□□ -0.82
HMGCL-205ENST00000479458 DUSP27Q5VZP5 1158 aa9.96□□□□□ -0.82
HMGCL-205ENST00000479458 TTLL7Q6ZT98 887 aa9.96□□□□□ -0.82
HMGCL-205ENST00000479458 CRAMP1Q96RY5 1269 aa9.96□□□□□ -0.82
HMGCL-205ENST00000479458 RTFDC1Q9BY42 306 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms