RNA–Protein interactions for RNA: ENST00000479215.1

ITCH-204, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene ITCH, Length 205 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-204ENST00000479215 DCPSQ96C86 337 aaKnown RBP11.8□□□□□ -0.52
ITCH-204ENST00000479215 ZBTB3Q9H5J0 574 aa11.8□□□□□ -0.52
ITCH-204ENST00000479215 GBA2Q9HCG7 927 aaPredicted RBP11.8□□□□□ -0.52
ITCH-204ENST00000479215 COL3A1P02461 1466 aaPredicted RBP11.79□□□□□ -0.52
ITCH-204ENST00000479215 RAD17O75943 681 aa11.79□□□□□ -0.52
ITCH-204ENST00000479215 MYL6BP14649 208 aa11.79□□□□□ -0.52
ITCH-204ENST00000479215 RPS12P25398 132 aaKnown RBP11.79□□□□□ -0.52
ITCH-204ENST00000479215 ZNF157P51786 506 aaPredicted RBP11.79□□□□□ -0.52
ITCH-204ENST00000479215 HIRAP54198 1017 aaPredicted RBP11.79□□□□□ -0.52
ITCH-204ENST00000479215 DDX46Q7L014 1031 aaKnown RBP11.79□□□□□ -0.52
ITCH-204ENST00000479215 KRT26Q7Z3Y9 468 aa11.79□□□□□ -0.52
ITCH-204ENST00000479215 CTU1Q7Z7A3 348 aaKnown RBP11.79□□□□□ -0.52
ITCH-204ENST00000479215 USP48Q86UV5 1035 aa11.79□□□□□ -0.52
ITCH-204ENST00000479215 MICALL2Q8IY33 904 aa11.79□□□□□ -0.52
ITCH-204ENST00000479215 GCC1Q96CN9 775 aa11.79□□□□□ -0.52
ITCH-204ENST00000479215 LTBP1Q14766 1721 aa11.79□□□□□ -0.52
ITCH-204ENST00000479215 UBN2Q6ZU65 1347 aa11.79□□□□□ -0.52
ITCH-204ENST00000479215 COL4A5P29400 1685 aa11.78□□□□□ -0.52
ITCH-204ENST00000479215 CASP8AP2Q9UKL3 1982 aa11.78□□□□□ -0.52
ITCH-204ENST00000479215 TRPA1O75762 1119 aa11.78□□□□□ -0.52
ITCH-204ENST00000479215 KIF23Q02241 960 aaPredicted RBP11.78□□□□□ -0.52
ITCH-204ENST00000479215 CNGB1Q14028 1251 aaPredicted RBP11.78□□□□□ -0.52
ITCH-204ENST00000479215 DCTN1Q14203 1278 aa11.78□□□□□ -0.52
ITCH-204ENST00000479215 HSP90AB3PQ58FF7 597 aa11.78□□□□□ -0.52
ITCH-204ENST00000479215 TTLL7Q6ZT98 887 aa11.78□□□□□ -0.52
ITCH-204ENST00000479215 RNF186Q9NXI6 227 aa11.78□□□□□ -0.52
ITCH-204ENST00000479215 SOX10P56693 466 aa11.77□□□□□ -0.53
ITCH-204ENST00000479215 SULF1Q8IWU6 871 aa11.77□□□□□ -0.53
ITCH-204ENST00000479215 TRPM4Q8TD43 1214 aa11.77□□□□□ -0.53
ITCH-204ENST00000479215 MIS18AQ9NYP9 233 aa11.77□□□□□ -0.53
ITCH-204ENST00000479215 ABCC4O15439 1325 aa11.77□□□□□ -0.53
ITCH-204ENST00000479215 FAM155AB1AL88 458 aaPredicted RBP11.76□□□□□ -0.53
ITCH-204ENST00000479215 EIF4A1P60842 406 aaKnown RBP11.76□□□□□ -0.53
ITCH-204ENST00000479215 GRAPQ13588 217 aa11.76□□□□□ -0.53
ITCH-204ENST00000479215 WASHC4Q2M389 1173 aa11.76□□□□□ -0.53
ITCH-204ENST00000479215 GRAPLQ8TC17 118 aaPredicted RBP11.76□□□□□ -0.53
ITCH-204ENST00000479215 PNNQ9H307 717 aaKnown RBP11.76□□□□□ -0.53
ITCH-204ENST00000479215 FKBP1BP68106 108 aa11.75□□□□□ -0.53
ITCH-204ENST00000479215 ZIC5Q96T25 663 aa11.75□□□□□ -0.53
ITCH-204ENST00000479215 EYA3Q99504 573 aa11.75□□□□□ -0.53
ITCH-204ENST00000479215 HDAC9Q9UKV0 1011 aa11.75□□□□□ -0.53
ITCH-204ENST00000479215 SLC10A3P09131 477 aa11.74□□□□□ -0.53
ITCH-204ENST00000479215 C3orf67Q6ZVT6 689 aa11.74□□□□□ -0.53
ITCH-204ENST00000479215 SAMD7Q7Z3H4 446 aa11.74□□□□□ -0.53
ITCH-204ENST00000479215 CSRNP1Q96S65 589 aa11.74□□□□□ -0.53
ITCH-204ENST00000479215 TRMT112Q9UI30 125 aaKnown RBP11.74□□□□□ -0.53
ITCH-204ENST00000479215 SH3TC1Q8TE82 1336 aa11.74□□□□□ -0.53
ITCH-204ENST00000479215 YDJCA8MPS7 323 aa11.73□□□□□ -0.53
ITCH-204ENST00000479215 G3V3G9 751 aa11.73□□□□□ -0.53
ITCH-204ENST00000479215 PSMD14O00487 310 aa11.73□□□□□ -0.53
ITCH-204ENST00000479215 TBC1D10BQ4KMP7 808 aaPredicted RBP11.73□□□□□ -0.53
ITCH-204ENST00000479215 DCAF8Q5TAQ9 597 aa11.73□□□□□ -0.53
ITCH-204ENST00000479215 NECTIN2Q92692 538 aa11.73□□□□□ -0.53
ITCH-204ENST00000479215 NSFL1CQ9UNZ2 370 aaKnown RBP11.73□□□□□ -0.53
ITCH-204ENST00000479215 ZBTB12Q9Y330 459 aaPredicted RBP11.73□□□□□ -0.53
ITCH-204ENST00000479215 C6orf229H3BNL8 230 aa11.72□□□□□ -0.53
ITCH-204ENST00000479215 RBM26Q5T8P6 1007 aaKnown RBP11.72□□□□□ -0.53
ITCH-204ENST00000479215 HPS5Q9UPZ3 1129 aa11.72□□□□□ -0.53
ITCH-204ENST00000479215 HCLS1P14317 486 aaPredicted RBP11.71□□□□□ -0.53
ITCH-204ENST00000479215 HSP90B1P14625 803 aaKnown RBP11.71□□□□□ -0.53
ITCH-204ENST00000479215 EIF2S2P20042 333 aaKnown RBP11.71□□□□□ -0.53
ITCH-204ENST00000479215 KIF4BQ2VIQ3 1234 aa11.71□□□□□ -0.53
ITCH-204ENST00000479215 NOM1Q5C9Z4 860 aaKnown RBP11.71□□□□□ -0.53
ITCH-204ENST00000479215 NLRP10Q86W26 655 aa11.71□□□□□ -0.53
ITCH-204ENST00000479215 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.53
ITCH-204ENST00000479215 ZC3H12CQ9C0D7 883 aaKnown RBP11.71□□□□□ -0.53
ITCH-204ENST00000479215 BABAM1Q9NWV8 329 aa11.71□□□□□ -0.53
ITCH-204ENST00000479215 NUP98P52948 1817 aa11.71□□□□□ -0.54
ITCH-204ENST00000479215 ADM5C9JUS6 153 aa11.7□□□□□ -0.54
ITCH-204ENST00000479215 PPP2R1AP30153 589 aa11.7□□□□□ -0.54
ITCH-204ENST00000479215 TCIRG1Q13488 830 aa11.7□□□□□ -0.54
ITCH-204ENST00000479215 DBNDD1Q9H9R9 158 aa11.7□□□□□ -0.54
ITCH-204ENST00000479215 GGA3Q9NZ52 723 aa11.7□□□□□ -0.54
ITCH-204ENST00000479215 TSPYL4Q9UJ04 414 aa11.7□□□□□ -0.54
ITCH-204ENST00000479215 MAPK8IP3Q9UPT6 1336 aa11.69□□□□□ -0.54
ITCH-204ENST00000479215 SHTN1A0MZ66 631 aa11.69□□□□□ -0.54
ITCH-204ENST00000479215 RIMBP2O15034 1052 aa11.69□□□□□ -0.54
ITCH-204ENST00000479215 ECE2O60344 883 aa11.69□□□□□ -0.54
ITCH-204ENST00000479215 VIL1P09327 827 aaKnown RBP11.69□□□□□ -0.54
ITCH-204ENST00000479215 NFE2L2Q16236 605 aa11.69□□□□□ -0.54
ITCH-204ENST00000479215 COPS6Q7L5N1 327 aa11.69□□□□□ -0.54
ITCH-204ENST00000479215 SLC51AQ86UW1 340 aa11.69□□□□□ -0.54
ITCH-204ENST00000479215 AGBL3Q8NEM8 1001 aa11.69□□□□□ -0.54
ITCH-204ENST00000479215 CDCA5Q96FF9 252 aa11.69□□□□□ -0.54
ITCH-204ENST00000479215 NF2P35240 595 aa11.68□□□□□ -0.54
ITCH-204ENST00000479215 PDIA6Q15084 440 aa11.68□□□□□ -0.54
ITCH-204ENST00000479215 SF3B3Q15393 1217 aaKnown RBP11.68□□□□□ -0.54
ITCH-204ENST00000479215 FBXO46Q6PJ61 603 aaPredicted RBP11.68□□□□□ -0.54
ITCH-204ENST00000479215 RASAL3Q86YV0 1011 aa11.68□□□□□ -0.54
ITCH-204ENST00000479215 LAMB4A4D0S4 1761 aa11.68□□□□□ -0.54
ITCH-204ENST00000479215 PITPNM2Q9BZ72 1349 aa11.67□□□□□ -0.54
ITCH-204ENST00000479215 SREBF2Q12772 1141 aa11.67□□□□□ -0.54
ITCH-204ENST00000479215 AIMP1Q12904 312 aaKnown RBP11.67□□□□□ -0.54
ITCH-204ENST00000479215 INTS3Q68E01 1043 aaKnown RBP11.67□□□□□ -0.54
ITCH-204ENST00000479215 DLK2Q6UY11 383 aa11.67□□□□□ -0.54
ITCH-204ENST00000479215 LRP10Q7Z4F1 713 aa11.67□□□□□ -0.54
ITCH-204ENST00000479215 ZNF296Q8WUU4 475 aaPredicted RBP11.67□□□□□ -0.54
ITCH-204ENST00000479215 THUMPD2Q9BTF0 503 aaKnown RBP11.67□□□□□ -0.54
ITCH-204ENST00000479215 POLLQ9UGP5 575 aa11.67□□□□□ -0.54
ITCH-204ENST00000479215 GPR25O00155 361 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms