RNA–Protein interactions for RNA: ENST00000478720.1

ITSN2-211, Transcript of intersectin 2, humanhuman

TSL 2

Gene ITSN2, Length 2,035 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-211ENST00000478720 TPCN1Q9ULQ1 816 aa17.9■□□□□ 0.46
ITSN2-211ENST00000478720 MTMR6Q9Y217 621 aa17.9■□□□□ 0.46
ITSN2-211ENST00000478720 TJP1Q07157 1748 aa17.9■□□□□ 0.46
ITSN2-211ENST00000478720 KCPQ6ZWJ8 1503 aa17.9■□□□□ 0.46
ITSN2-211ENST00000478720 H7C1W4 665 aa17.89■□□□□ 0.46
ITSN2-211ENST00000478720 ZSCAN30Q86W11 494 aa17.89■□□□□ 0.46
ITSN2-211ENST00000478720 DDX54Q8TDD1 881 aaKnown RBP17.89■□□□□ 0.46
ITSN2-211ENST00000478720 ERVV-2B6SEH9 535 aa17.89■□□□□ 0.45
ITSN2-211ENST00000478720 TAF5LO75529 589 aa17.89■□□□□ 0.45
ITSN2-211ENST00000478720 USPL1Q5W0Q7 1092 aa17.89■□□□□ 0.45
ITSN2-211ENST00000478720 BLOC1S2Q6QNY1 142 aa17.89■□□□□ 0.45
ITSN2-211ENST00000478720 BRINP3Q76B58 766 aa17.89■□□□□ 0.45
ITSN2-211ENST00000478720 ZCRB1Q8TBF4 217 aaKnown RBP17.89■□□□□ 0.45
ITSN2-211ENST00000478720 EDC3Q96F86 508 aaKnown RBP17.89■□□□□ 0.45
ITSN2-211ENST00000478720 RPS6KB1P23443 525 aa17.88■□□□□ 0.45
ITSN2-211ENST00000478720 UBE2HP62256 183 aa17.88■□□□□ 0.45
ITSN2-211ENST00000478720 FOXO4P98177 505 aa17.88■□□□□ 0.45
ITSN2-211ENST00000478720 ANKRD1Q15327 319 aa17.88■□□□□ 0.45
ITSN2-211ENST00000478720 HAUS7Q99871 368 aa17.88■□□□□ 0.45
ITSN2-211ENST00000478720 NKX1-1Q15270 411 aaPredicted RBP17.88■□□□□ 0.45
ITSN2-211ENST00000478720 DBNDD2Q9BQY9 259 aa17.88■□□□□ 0.45
ITSN2-211ENST00000478720 COL5A2P05997 1499 aaPredicted RBP17.87■□□□□ 0.45
ITSN2-211ENST00000478720 SHANK3Q9BYB0 1731 aa17.87■□□□□ 0.45
ITSN2-211ENST00000478720 PDIA4P13667 645 aaKnown RBP17.87■□□□□ 0.45
ITSN2-211ENST00000478720 CCDC183Q5T5S1 534 aa17.87■□□□□ 0.45
ITSN2-211ENST00000478720 LMBR1LQ6UX01 489 aa17.87■□□□□ 0.45
ITSN2-211ENST00000478720 NECAB1Q8N987 351 aa17.87■□□□□ 0.45
ITSN2-211ENST00000478720 COL9A3Q14050 684 aaPredicted RBP17.86■□□□□ 0.45
ITSN2-211ENST00000478720 CSPP1Q1MSJ5 1256 aa17.86■□□□□ 0.45
ITSN2-211ENST00000478720 PRDM11Q9NQV5 511 aa17.86■□□□□ 0.45
ITSN2-211ENST00000478720 TAF6LQ9Y6J9 622 aa17.86■□□□□ 0.45
ITSN2-211ENST00000478720 ZNF609O15014 1411 aa17.86■□□□□ 0.45
ITSN2-211ENST00000478720 TTLL7Q6ZT98 887 aa17.86■□□□□ 0.45
ITSN2-211ENST00000478720 TOM1L2Q6ZVM7 507 aa17.86■□□□□ 0.45
ITSN2-211ENST00000478720 CWC25Q9NXE8 425 aaPredicted RBP17.86■□□□□ 0.45
ITSN2-211ENST00000478720 TNS2Q63HR2 1409 aa17.85■□□□□ 0.45
ITSN2-211ENST00000478720 TOB2Q14106 344 aaPredicted RBP17.85■□□□□ 0.45
ITSN2-211ENST00000478720 KRT32Q14532 448 aa17.85■□□□□ 0.45
ITSN2-211ENST00000478720 ABCA3Q99758 1704 aa17.85■□□□□ 0.45
ITSN2-211ENST00000478720 LETM1O95202 739 aaPredicted RBP17.84■□□□□ 0.45
ITSN2-211ENST00000478720 GPR108Q9NPR9 543 aa17.84■□□□□ 0.45
ITSN2-211ENST00000478720 SOS2Q07890 1332 aaPredicted RBP17.84■□□□□ 0.45
ITSN2-211ENST00000478720 FIBPO43427 364 aa17.84■□□□□ 0.45
ITSN2-211ENST00000478720 ATG9AQ7Z3C6 839 aa17.84■□□□□ 0.45
ITSN2-211ENST00000478720 KLHL34Q8N239 644 aa17.84■□□□□ 0.45
ITSN2-211ENST00000478720 RNF214Q8ND24 703 aa17.84■□□□□ 0.45
ITSN2-211ENST00000478720 DNAJC2Q99543 621 aaKnown RBP17.84■□□□□ 0.45
ITSN2-211ENST00000478720 DNM1Q05193 864 aaKnown RBP17.83■□□□□ 0.45
ITSN2-211ENST00000478720 U3KPZ7 1027 aaPredicted RBP17.83■□□□□ 0.45
ITSN2-211ENST00000478720 VPS37CA5D8V6 355 aaPredicted RBP17.82■□□□□ 0.44
ITSN2-211ENST00000478720 A1BGP04217 495 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 MCMDC2Q4G0Z9 681 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 KBTBD3Q8NAB2 608 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 CCDC191Q8NCU4 936 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 NAP1L5Q96NT1 182 aaPredicted RBP17.82■□□□□ 0.44
ITSN2-211ENST00000478720 CARD10Q9BWT7 1032 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 NOL7Q9UMY1 257 aaKnown RBP17.82■□□□□ 0.44
ITSN2-211ENST00000478720 NDUFB9Q9Y6M9 179 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 SH3TC1Q8TE82 1336 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 PALLDQ8WX93 1383 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 IL2RBP14784 551 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 PDCP20941 246 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 MSNP26038 577 aaKnown RBP17.82■□□□□ 0.44
ITSN2-211ENST00000478720 LARP1BQ659C4 914 aaKnown RBP17.82■□□□□ 0.44
ITSN2-211ENST00000478720 TICAM2Q86XR7 235 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 FAM184AQ8NB25 1140 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 TCEANC2Q96MN5 208 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 CHMP3Q9Y3E7 222 aa17.82■□□□□ 0.44
ITSN2-211ENST00000478720 DTNBO60941 627 aa17.81■□□□□ 0.44
ITSN2-211ENST00000478720 IL15P40933 162 aaPredicted RBP17.81■□□□□ 0.44
ITSN2-211ENST00000478720 HSPA2P54652 639 aa17.81■□□□□ 0.44
ITSN2-211ENST00000478720 UVSSAQ2YD98 709 aa17.81■□□□□ 0.44
ITSN2-211ENST00000478720 CCDC129Q6ZRS4 1044 aa17.81■□□□□ 0.44
ITSN2-211ENST00000478720 DDX46Q7L014 1031 aaKnown RBP17.81■□□□□ 0.44
ITSN2-211ENST00000478720 NEK1Q96PY6 1258 aa17.81■□□□□ 0.44
ITSN2-211ENST00000478720 TOGARAM1Q9Y4F4 1720 aa17.8■□□□□ 0.44
ITSN2-211ENST00000478720 SEC62Q99442 399 aaKnown RBP17.8■□□□□ 0.44
ITSN2-211ENST00000478720 CHGBP05060 677 aa17.79■□□□□ 0.44
ITSN2-211ENST00000478720 CDC37L1Q7L3B6 337 aa17.79■□□□□ 0.44
ITSN2-211ENST00000478720 ATG3Q9NT62 314 aa17.79■□□□□ 0.44
ITSN2-211ENST00000478720 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.79■□□□□ 0.44
ITSN2-211ENST00000478720 CCDC39Q9UFE4 941 aa17.79■□□□□ 0.44
ITSN2-211ENST00000478720 SPEF2Q9C093 1822 aa17.79■□□□□ 0.44
ITSN2-211ENST00000478720 EYA2O00167 538 aa17.79■□□□□ 0.44
ITSN2-211ENST00000478720 CIAO1O76071 339 aa17.79■□□□□ 0.44
ITSN2-211ENST00000478720 ZBTB3Q9H5J0 574 aa17.79■□□□□ 0.44
ITSN2-211ENST00000478720 HELLSQ9NRZ9 838 aa17.79■□□□□ 0.44
ITSN2-211ENST00000478720 NEUROD6Q96NK8 337 aa17.78■□□□□ 0.44
ITSN2-211ENST00000478720 PAG1Q9NWQ8 432 aa17.78■□□□□ 0.44
ITSN2-211ENST00000478720 CYP21A2P08686 494 aa17.77■□□□□ 0.44
ITSN2-211ENST00000478720 MCM5P33992 734 aa17.77■□□□□ 0.44
ITSN2-211ENST00000478720 KRT85P78386 507 aa17.77■□□□□ 0.44
ITSN2-211ENST00000478720 GTF3C6Q969F1 213 aa17.77■□□□□ 0.44
ITSN2-211ENST00000478720 ISCA1Q9BUE6 129 aa17.77■□□□□ 0.44
ITSN2-211ENST00000478720 LAMA4Q16363 1823 aa17.77■□□□□ 0.44
ITSN2-211ENST00000478720 ELP1O95163 1332 aa17.77■□□□□ 0.44
ITSN2-211ENST00000478720 GOLIM4O00461 696 aa17.77■□□□□ 0.43
ITSN2-211ENST00000478720 ZNF500O60304 480 aaPredicted RBP17.77■□□□□ 0.43
ITSN2-211ENST00000478720 LRRC24Q50LG9 513 aa17.77■□□□□ 0.43
ITSN2-211ENST00000478720 FUCA2Q9BTY2 467 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms