RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 PTPN14Q15678 1187 aa17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 KCNB2Q92953 911 aa17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 STK31Q9BXU1 1019 aa17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 COL22A1Q8NFW1 1626 aaPredicted RBP17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 VPS37CA5D8V6 355 aaPredicted RBP17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 TULP2O00295 520 aa17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 CASTP20810 708 aaKnown RBP17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 AKAP4Q5JQC9 854 aa17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 IL25Q9H293 177 aa17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 PDRG1Q9NUG6 133 aa17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 WDR17Q8IZU2 1322 aa17.98■□□□□ 0.47
CLSTN1-205ENST00000477264 PNMA6EA0A0J9YXQ4 647 aa17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 EVA1CP58658 441 aa17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 TOM1L2Q6ZVM7 507 aa17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 CACTINQ8WUQ7 758 aaKnown RBP17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 KIF1BPQ96EK5 621 aa17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 COL5A2P05997 1499 aaPredicted RBP17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 GOLGA6L4A6NEF3 574 aa17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 SLU7O95391 586 aaKnown RBP17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 LIG1P18858 919 aa17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 BMS1Q14692 1282 aaKnown RBP17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 CYP46A1Q9Y6A2 500 aa17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 USP42Q9H9J4 1324 aaKnown RBP17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 COL16A1Q07092 1604 aaPredicted RBP17.97■□□□□ 0.47
CLSTN1-205ENST00000477264 ZNF165P49910 485 aa17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 TPRNQ4KMQ1 711 aa17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 LRRC8AQ8IWT6 810 aa17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 RASEFQ8IZ41 740 aa17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 IL17REQ8NFR9 667 aa17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 PI4K2BQ8TCG2 481 aa17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 ZSWIM6Q9HCJ5 1215 aa17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 NRBP1Q9UHY1 535 aa17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 TSPYL4Q9UJ04 414 aa17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 ZNF215Q9UL58 517 aaPredicted RBP17.96■□□□□ 0.47
CLSTN1-205ENST00000477264 F6X3S4 739 aa17.96■□□□□ 0.46
CLSTN1-205ENST00000477264 LARGE1O95461 756 aa17.96■□□□□ 0.46
CLSTN1-205ENST00000477264 TUBB4AP04350 444 aa17.96■□□□□ 0.46
CLSTN1-205ENST00000477264 SSH3Q8TE77 659 aa17.96■□□□□ 0.46
CLSTN1-205ENST00000477264 DHX8Q14562 1220 aaKnown RBP17.95■□□□□ 0.46
CLSTN1-205ENST00000477264 FBXO38Q6PIJ6 1188 aa17.95■□□□□ 0.46
CLSTN1-205ENST00000477264 G2E3Q7L622 706 aa17.95■□□□□ 0.46
CLSTN1-205ENST00000477264 STRN4Q9NRL3 753 aa17.95■□□□□ 0.46
CLSTN1-205ENST00000477264 DACT1Q9NYF0 836 aa17.95■□□□□ 0.46
CLSTN1-205ENST00000477264 SPG7Q9UQ90 795 aa17.95■□□□□ 0.46
CLSTN1-205ENST00000477264 GOLGA6L19H0YKK7 550 aa17.94■□□□□ 0.46
CLSTN1-205ENST00000477264 PLEKHG2Q9H7P9 1386 aa17.94■□□□□ 0.46
CLSTN1-205ENST00000477264 TTC41PQ6P2S7 1318 aa17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 GIGYF1O75420 1035 aaPredicted RBP17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 CYP2C19P33261 490 aa17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 NAA30Q147X3 362 aaPredicted RBP17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 TAF7Q15545 349 aaPredicted RBP17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 LARP1BQ659C4 914 aaKnown RBP17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 ZNF592Q92610 1267 aa17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 SPATA32Q96LK8 384 aa17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 NOL10Q9BSC4 688 aaKnown RBP17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 MIS18AQ9NYP9 233 aa17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 COL14A1Q05707 1796 aaKnown RBP17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 GSDMDP57764 484 aa17.93■□□□□ 0.46
CLSTN1-205ENST00000477264 MEGF6O75095 1541 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 CEMIPQ8WUJ3 1361 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 CTAGE5O15320 804 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 H2AFXP16104 143 aaPredicted RBP17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 TEFQ10587 303 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 FLIIQ13045 1269 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 ANKRD1Q15327 319 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 ELF2Q15723 593 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 CAMK4Q16566 473 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 CCDC30Q5VVM6 783 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 CKAP2LQ8IYA6 745 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 JAKMIP1Q96N16 626 aaKnown RBP17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 BABAM1Q9NWV8 329 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 BTG4Q9NY30 223 aa17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 LRRFIP2Q9Y608 721 aaKnown RBP17.92■□□□□ 0.46
CLSTN1-205ENST00000477264 UBTFL1P0CB47 393 aaPredicted RBP17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 POLA2Q14181 598 aa17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 CCDC144BQ3MJ40 725 aa17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 HSP90AB4PQ58FF6 505 aa17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 MPRIPQ6WCQ1 1025 aa17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 CCDC144CPQ8IYA2 1237 aa17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 ZKSCAN1P17029 563 aaPredicted RBP17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 KCNJ6P48051 423 aa17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 ST3GAL1Q11201 340 aa17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 CARD10Q9BWT7 1032 aa17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 LGR6Q9HBX8 967 aa17.91■□□□□ 0.46
CLSTN1-205ENST00000477264 GLRX3O76003 335 aaKnown RBP17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 SKILP12757 684 aa17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 CCAR2Q8N163 923 aaKnown RBP17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 CERKQ8TCT0 537 aa17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 LEO1Q8WVC0 666 aaPredicted RBP17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 ALDH8A1Q9H2A2 487 aaPredicted RBP17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 L2HGDHQ9H9P8 463 aa17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 PARP4Q9UKK3 1724 aaKnown RBP17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 PSMA5P28066 241 aa17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 STX1AQ16623 288 aa17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 TEX35Q5T0J7 233 aa17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 LARP1Q6PKG0 1096 aaKnown RBP17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 CDC37L1Q7L3B6 337 aa17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 RHPN1Q8TCX5 695 aa17.9■□□□□ 0.46
CLSTN1-205ENST00000477264 DNAJC25Q9H1X3 360 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms