RNA–Protein interactions for RNA: ENST00000476539.5

SUPT20H-214, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 528 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-214ENST00000476539 CTSHP09668 335 aa6.43□□□□□ -1.38
SUPT20H-214ENST00000476539 FAM157BP0CG42 384 aa6.43□□□□□ -1.38
SUPT20H-214ENST00000476539 TTC39BQ5VTQ0 682 aaPredicted RBP6.43□□□□□ -1.38
SUPT20H-214ENST00000476539 TRIM46Q7Z4K8 759 aa6.43□□□□□ -1.38
SUPT20H-214ENST00000476539 GALNT12Q8IXK2 581 aa6.43□□□□□ -1.38
SUPT20H-214ENST00000476539 EPS8L3Q8TE67 593 aaKnown RBP6.43□□□□□ -1.38
SUPT20H-214ENST00000476539 NPHS2Q9NP85 383 aa6.43□□□□□ -1.38
SUPT20H-214ENST00000476539 LOC105371045A0A1W2PR82 267 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 GADD45BO75293 160 aaPredicted RBP6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 GRNP28799 593 aaKnown RBP6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 IRS1P35568 1242 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 VEGFBP49765 207 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 ST13P50502 369 aaKnown RBP6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 KCNQ4P56696 695 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 PI16Q6UXB8 463 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 HS2ST1Q7LGA3 356 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 CRIPAKQ8N1N5 446 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 GAS2L1Q99501 681 aaPredicted RBP6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 TINF2Q9BSI4 451 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 CHRDQ9H2X0 955 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 DNMT3LQ9UJW3 386 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 KCNH4Q9UQ05 1017 aa6.42□□□□□ -1.38
SUPT20H-214ENST00000476539 AXIN1O15169 862 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 MAN1A2O60476 641 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 DGAT1O75907 488 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 USP17L7P0C7H9 530 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 EDN3P14138 238 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 CES1P23141 567 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 PTPN12Q05209 780 aaKnown RBP6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 LAMC2Q13753 1193 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 PKDCCQ504Y2 493 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 SLC43A3Q8NBI5 491 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 ZFP42Q96MM3 310 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 OSBPL7Q9BZF2 842 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 SUV39H2Q9H5I1 410 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 TRAK1Q9UPV9 953 aa6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.41□□□□□ -1.38
SUPT20H-214ENST00000476539 PHF20L1A8MW92 1017 aa6.4□□□□□ -1.38
SUPT20H-214ENST00000476539 EREGO14944 169 aa6.4□□□□□ -1.38
SUPT20H-214ENST00000476539 GSTT1P30711 240 aa6.4□□□□□ -1.38
SUPT20H-214ENST00000476539 TAF1CQ15572 869 aaPredicted RBP6.4□□□□□ -1.38
SUPT20H-214ENST00000476539 ZNF654Q8IZM8 581 aa6.4□□□□□ -1.38
SUPT20H-214ENST00000476539 C1orf127Q8N9H9 656 aa6.4□□□□□ -1.38
SUPT20H-214ENST00000476539 BCO2Q9BYV7 579 aa6.4□□□□□ -1.38
SUPT20H-214ENST00000476539 EFCC1Q9HA90 598 aa6.4□□□□□ -1.38
SUPT20H-214ENST00000476539 USP31Q70CQ4 1352 aa6.4□□□□□ -1.39
SUPT20H-214ENST00000476539 POTECB2RU33 542 aa6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 ATXN7O15265 892 aaPredicted RBP6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 EFSO43281 561 aa6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 POLR3DP05423 398 aaPredicted RBP6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 CCINQ13939 588 aa6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 USP48Q86UV5 1035 aa6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 CAPN10Q9HC96 672 aa6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 PPP4R2Q9NY27 417 aa6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 CNTN3Q9P232 1028 aa6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 GGT7Q9UJ14 662 aa6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 PCDHGC4Q9Y5F7 938 aa6.39□□□□□ -1.39
SUPT20H-214ENST00000476539 SENP3-EIF4A1A0A087X0R7 540 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 H7C1W4 665 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 SOX18P35713 384 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 GRM2Q14416 872 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 KIAA0319Q5VV43 1072 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 NXPE4Q6UWF7 544 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 RIPOR1Q6ZS17 1223 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 OR13H1Q8NG92 308 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 PNMA5Q96PV4 448 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 TANGO6Q9C0B7 1094 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 ZCCHC2Q9C0B9 1178 aaKnown RBP6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 NUCKS1Q9H1E3 243 aaKnown RBP6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 ACBD3Q9H3P7 528 aa6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 PPP1R1BQ9UD71 204 aaPredicted RBP6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 DDX41Q9UJV9 622 aaKnown RBP6.38□□□□□ -1.39
SUPT20H-214ENST00000476539 DCDC2BA2VCK2 349 aa6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 NRG2O14511 850 aaPredicted RBP6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 KHNYNO15037 678 aaKnown RBP6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 RARAP10276 462 aa6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 XRCC5P13010 732 aaKnown RBP6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 MEI1Q5TIA1 1274 aa6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 PRPF40BQ6NWY9 871 aaKnown RBP6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 ARMC5Q96C12 935 aa6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 NOC4LQ9BVI4 516 aaKnown RBP6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 EHD4Q9H223 541 aa6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 PPM1HQ9ULR3 514 aa6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 INPP5FQ9Y2H2 1132 aa6.37□□□□□ -1.39
SUPT20H-214ENST00000476539 SASH3O75995 380 aa6.36□□□□□ -1.39
SUPT20H-214ENST00000476539 HOXD8P13378 290 aaPredicted RBP6.36□□□□□ -1.39
SUPT20H-214ENST00000476539 ZNF394Q53GI3 561 aa6.36□□□□□ -1.39
SUPT20H-214ENST00000476539 ERMP1Q7Z2K6 904 aa6.36□□□□□ -1.39
SUPT20H-214ENST00000476539 GMCL1Q96IK5 515 aa6.36□□□□□ -1.39
SUPT20H-214ENST00000476539 GSX2Q9BZM3 304 aa6.36□□□□□ -1.39
SUPT20H-214ENST00000476539 KANSL3Q9P2N6 904 aa6.36□□□□□ -1.39
SUPT20H-214ENST00000476539 TTF2Q9UNY4 1162 aaKnown RBP6.36□□□□□ -1.39
SUPT20H-214ENST00000476539 PCDHGB7Q9Y5F8 929 aa6.36□□□□□ -1.39
SUPT20H-214ENST00000476539 A0A1W2PP55 124 aa6.35□□□□□ -1.39
SUPT20H-214ENST00000476539 MMP20O60882 483 aa6.35□□□□□ -1.39
SUPT20H-214ENST00000476539 MAP3K6O95382 1288 aa6.35□□□□□ -1.39
SUPT20H-214ENST00000476539 PSAPP07602 524 aa6.35□□□□□ -1.39
SUPT20H-214ENST00000476539 TNP2Q05952 138 aa6.35□□□□□ -1.39
SUPT20H-214ENST00000476539 SPEM2Q0P670 501 aa6.35□□□□□ -1.39
SUPT20H-214ENST00000476539 SFSWAPQ12872 951 aaKnown RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms