RNA–Protein interactions for RNA: ENST00000476539.5

SUPT20H-214, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 3

Gene SUPT20H, Length 528 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-214ENST00000476539 CHIC1Q5VXU3 224 aa16.59■□□□□ 0.25
SUPT20H-214ENST00000476539 AEBP2Q6ZN18 517 aaPredicted RBP16.43■□□□□ 0.22
SUPT20H-214ENST00000476539 PHF23Q9BUL5 403 aaPredicted RBP14.57□□□□□ -0.08
SUPT20H-214ENST00000476539 SENP3Q9H4L4 574 aaPredicted RBP13.97□□□□□ -0.17
SUPT20H-214ENST00000476539 PLPPR3Q6T4P5 718 aa13.72□□□□□ -0.21
SUPT20H-214ENST00000476539 FOXD1Q16676 465 aa12.82□□□□□ -0.36
SUPT20H-214ENST00000476539 ADRA2BP18089 450 aa12.72□□□□□ -0.37
SUPT20H-214ENST00000476539 PPP6R1Q9UPN7 881 aa12.67□□□□□ -0.38
SUPT20H-214ENST00000476539 KCNA4P22459 653 aa12.35□□□□□ -0.43
SUPT20H-214ENST00000476539 PIAS4Q8N2W9 510 aaPredicted RBP12.27□□□□□ -0.45
SUPT20H-214ENST00000476539 PPP4R3CPQ6ZMV5 832 aa12.1□□□□□ -0.47
SUPT20H-214ENST00000476539 EHMT2Q96KQ7 1210 aa12.07□□□□□ -0.48
SUPT20H-214ENST00000476539 NCBP3Q53F19 620 aaKnown RBP11.99□□□□□ -0.49
SUPT20H-214ENST00000476539 SLC4A1APQ9BWU0 796 aaKnown RBP11.9□□□□□ -0.5
SUPT20H-214ENST00000476539 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
SUPT20H-214ENST00000476539 SCAF1Q9H7N4 1312 aaKnown RBP11.74□□□□□ -0.53
SUPT20H-214ENST00000476539 MSH5O43196 834 aa11.73□□□□□ -0.53
SUPT20H-214ENST00000476539 CNKSR2Q8WXI2 1034 aa11.7□□□□□ -0.54
SUPT20H-214ENST00000476539 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
SUPT20H-214ENST00000476539 DNAJC5BQ9UF47 199 aa11.41□□□□□ -0.58
SUPT20H-214ENST00000476539 ZBTB22O15209 634 aa11.36□□□□□ -0.59
SUPT20H-214ENST00000476539 MAPK8IP2Q13387 824 aaPredicted RBP11.35□□□□□ -0.59
SUPT20H-214ENST00000476539 RNF216Q9NWF9 866 aaPredicted RBP11.34□□□□□ -0.59
SUPT20H-214ENST00000476539 FOXD4L1Q9NU39 408 aa11.3□□□□□ -0.6
SUPT20H-214ENST00000476539 DMRT2Q9Y5R5 561 aa11.21□□□□□ -0.61
SUPT20H-214ENST00000476539 HOXD11P31277 338 aaPredicted RBP11.16□□□□□ -0.62
SUPT20H-214ENST00000476539 POTEDQ86YR6 584 aa11.16□□□□□ -0.62
SUPT20H-214ENST00000476539 SLC4A2P04920 1241 aa10.95□□□□□ -0.66
SUPT20H-214ENST00000476539 MYCNP04198 464 aaPredicted RBP10.91□□□□□ -0.66
SUPT20H-214ENST00000476539 ATXN8OSP0DMR3 200 aa10.88□□□□□ -0.67
SUPT20H-214ENST00000476539 DCAF8L1A6NGE4 600 aa10.67□□□□□ -0.7
SUPT20H-214ENST00000476539 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.64□□□□□ -0.71
SUPT20H-214ENST00000476539 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
SUPT20H-214ENST00000476539 HNRNPUL2Q1KMD3 747 aaKnown RBP10.63□□□□□ -0.71
SUPT20H-214ENST00000476539 SAMD1Q6SPF0 538 aaPredicted RBP10.6□□□□□ -0.71
SUPT20H-214ENST00000476539 FKBP8Q14318 412 aa10.57□□□□□ -0.72
SUPT20H-214ENST00000476539 AMER1Q5JTC6 1135 aaPredicted RBP10.55□□□□□ -0.72
SUPT20H-214ENST00000476539 U3KPZ7 1027 aaPredicted RBP10.5□□□□□ -0.73
SUPT20H-214ENST00000476539 RTN4Q9NQC3 1192 aaKnown RBP10.46□□□□□ -0.73
SUPT20H-214ENST00000476539 ATF5Q9Y2D1 282 aaPredicted RBP10.46□□□□□ -0.73
SUPT20H-214ENST00000476539 APLP2Q06481 763 aa10.43□□□□□ -0.74
SUPT20H-214ENST00000476539 ZNF219Q9P2Y4 722 aaPredicted RBP10.31□□□□□ -0.76
SUPT20H-214ENST00000476539 SLC24A1O60721 1099 aa10.29□□□□□ -0.76
SUPT20H-214ENST00000476539 FBXO3Q9UK99 471 aa10.14□□□□□ -0.79
SUPT20H-214ENST00000476539 SPDYE4A6NLX3 237 aa10.12□□□□□ -0.79
SUPT20H-214ENST00000476539 FBLN2P98095 1184 aa10.11□□□□□ -0.79
SUPT20H-214ENST00000476539 TRHP20396 242 aaPredicted RBP10.06□□□□□ -0.8
SUPT20H-214ENST00000476539 MKRN4PQ13434 485 aaPredicted RBP10.06□□□□□ -0.8
SUPT20H-214ENST00000476539 RNF39Q9H2S5 420 aa10.06□□□□□ -0.8
SUPT20H-214ENST00000476539 PROM2Q8N271 834 aa10.03□□□□□ -0.8
SUPT20H-214ENST00000476539 SPINK5Q9NQ38 1064 aaPredicted RBP10.03□□□□□ -0.8
SUPT20H-214ENST00000476539 CAPN15O75808 1086 aa10.01□□□□□ -0.81
SUPT20H-214ENST00000476539 POLA2Q14181 598 aa10□□□□□ -0.81
SUPT20H-214ENST00000476539 ZBTB12Q9Y330 459 aaPredicted RBP10□□□□□ -0.81
SUPT20H-214ENST00000476539 C1QBPQ07021 282 aaKnown RBP9.99□□□□□ -0.81
SUPT20H-214ENST00000476539 VASPP50552 380 aaPredicted RBP9.95□□□□□ -0.82
SUPT20H-214ENST00000476539 ABCB7O75027 752 aa9.83□□□□□ -0.84
SUPT20H-214ENST00000476539 IFNLR1Q8IU57 520 aaPredicted RBP9.8□□□□□ -0.84
SUPT20H-214ENST00000476539 SPDYE2BA6NHP3 402 aa9.72□□□□□ -0.85
SUPT20H-214ENST00000476539 SPDYE6P0CI01 402 aa9.72□□□□□ -0.85
SUPT20H-214ENST00000476539 DSG3P32926 999 aa9.72□□□□□ -0.85
SUPT20H-214ENST00000476539 SPDYE2Q495Y8 402 aa9.72□□□□□ -0.85
SUPT20H-214ENST00000476539 ZNF692Q9BU19 519 aaPredicted RBP9.71□□□□□ -0.86
SUPT20H-214ENST00000476539 PLCB2Q00722 1185 aa9.7□□□□□ -0.86
SUPT20H-214ENST00000476539 STAG3Q9UJ98 1225 aa9.7□□□□□ -0.86
SUPT20H-214ENST00000476539 DCAF8L2P0C7V8 631 aa9.68□□□□□ -0.86
SUPT20H-214ENST00000476539 SSUH2Q9Y2M2 353 aa9.68□□□□□ -0.86
SUPT20H-214ENST00000476539 OSCARQ8IYS5 282 aa9.67□□□□□ -0.86
SUPT20H-214ENST00000476539 PKD2Q13563 968 aa9.66□□□□□ -0.86
SUPT20H-214ENST00000476539 KLHL34Q8N239 644 aa9.65□□□□□ -0.86
SUPT20H-214ENST00000476539 SPOCK2Q92563 424 aa9.65□□□□□ -0.86
SUPT20H-214ENST00000476539 PABPN1Q86U42 306 aaKnown RBP eCLIP9.6□□□□□ -0.87
SUPT20H-214ENST00000476539 PLCD3Q8N3E9 789 aa9.6□□□□□ -0.87
SUPT20H-214ENST00000476539 ECM2O94769 699 aaPredicted RBP9.54□□□□□ -0.88
SUPT20H-214ENST00000476539 PLEKHG5O94827 1062 aa9.54□□□□□ -0.88
SUPT20H-214ENST00000476539 HAP1P54257 671 aaPredicted RBP9.53□□□□□ -0.88
SUPT20H-214ENST00000476539 ZBTB47Q9UFB7 747 aaPredicted RBP9.53□□□□□ -0.88
SUPT20H-214ENST00000476539 MIER1Q8N108 512 aa9.52□□□□□ -0.89
SUPT20H-214ENST00000476539 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.5□□□□□ -0.89
SUPT20H-214ENST00000476539 CACNB1Q02641 598 aaPredicted RBP9.47□□□□□ -0.89
SUPT20H-214ENST00000476539 BBXQ8WY36 941 aaPredicted RBP9.47□□□□□ -0.89
SUPT20H-214ENST00000476539 VSIG10Q8N0Z9 540 aa9.43□□□□□ -0.9
SUPT20H-214ENST00000476539 TRIM41Q8WV44 630 aa9.42□□□□□ -0.9
SUPT20H-214ENST00000476539 RGL2O15211 777 aa9.4□□□□□ -0.9
SUPT20H-214ENST00000476539 CIZ1Q9ULV3 898 aaPredicted RBP9.39□□□□□ -0.91
SUPT20H-214ENST00000476539 BCANQ96GW7 911 aa9.38□□□□□ -0.91
SUPT20H-214ENST00000476539 NPM1P06748 294 aaKnown RBP eCLIP9.36□□□□□ -0.91
SUPT20H-214ENST00000476539 PAXIP1Q6ZW49 1069 aaPredicted RBP9.36□□□□□ -0.91
SUPT20H-214ENST00000476539 RBM42Q9BTD8 480 aaKnown RBP9.34□□□□□ -0.91
SUPT20H-214ENST00000476539 GSE1Q14687 1217 aa9.32□□□□□ -0.92
SUPT20H-214ENST00000476539 SPDYE1Q8NFV5 336 aaPredicted RBP9.32□□□□□ -0.92
SUPT20H-214ENST00000476539 CFAP44Q96MT7 982 aa9.32□□□□□ -0.92
SUPT20H-214ENST00000476539 SPRYD3Q8NCJ5 442 aa9.3□□□□□ -0.92
SUPT20H-214ENST00000476539 CHGAP10645 457 aaKnown RBP9.29□□□□□ -0.92
SUPT20H-214ENST00000476539 AKT1S1Q96B36 256 aa9.28□□□□□ -0.92
SUPT20H-214ENST00000476539 HS6ST3Q8IZP7 471 aa9.26□□□□□ -0.93
SUPT20H-214ENST00000476539 TAOK2Q9UL54 1235 aa9.26□□□□□ -0.93
SUPT20H-214ENST00000476539 NUBP1P53384 320 aa9.23□□□□□ -0.93
SUPT20H-214ENST00000476539 KDM2AQ9Y2K7 1162 aa9.23□□□□□ -0.93
SUPT20H-214ENST00000476539 FAM212AQ96EL1 285 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms