RNA–Protein interactions for RNA: ENST00000475912.1

PRKD3-208, Transcript of protein kinase D3, humanhuman

TSL 3

Gene PRKD3, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-208ENST00000475912 SLC6A14Q9UN76 642 aa9.25□□□□□ -0.93
PRKD3-208ENST00000475912 XYLBO75191 536 aa9.24□□□□□ -0.93
PRKD3-208ENST00000475912 RARAP10276 462 aa9.24□□□□□ -0.93
PRKD3-208ENST00000475912 SSFA2P28290 1259 aa9.24□□□□□ -0.93
PRKD3-208ENST00000475912 TRIM11Q96F44 468 aa9.24□□□□□ -0.93
PRKD3-208ENST00000475912 STIM2Q9P246 746 aa9.24□□□□□ -0.93
PRKD3-208ENST00000475912 KCNMB2Q9Y691 235 aa9.24□□□□□ -0.93
PRKD3-208ENST00000475912 MICALL1Q8N3F8 863 aa9.23□□□□□ -0.93
PRKD3-208ENST00000475912 C11orf16Q9NQ32 467 aa9.23□□□□□ -0.93
PRKD3-208ENST00000475912 ZBTB39O15060 712 aa9.22□□□□□ -0.93
PRKD3-208ENST00000475912 MAP3K6O95382 1288 aa9.22□□□□□ -0.93
PRKD3-208ENST00000475912 ZAP70P43403 619 aa9.22□□□□□ -0.93
PRKD3-208ENST00000475912 TRIP4Q15650 581 aaPredicted RBP9.22□□□□□ -0.93
PRKD3-208ENST00000475912 C20orf204Q6ZNR8 217 aa9.22□□□□□ -0.93
PRKD3-208ENST00000475912 DHX32Q7L7V1 743 aaKnown RBP9.22□□□□□ -0.93
PRKD3-208ENST00000475912 PLVAPQ9BX97 442 aa9.22□□□□□ -0.93
PRKD3-208ENST00000475912 NOP53Q9NZM5 478 aaKnown RBP9.22□□□□□ -0.93
PRKD3-208ENST00000475912 NAGPAQ9UK23 515 aa9.22□□□□□ -0.93
PRKD3-208ENST00000475912 KRBA1A5PL33 1030 aa9.21□□□□□ -0.94
PRKD3-208ENST00000475912 EGFRP00533 1210 aa9.21□□□□□ -0.94
PRKD3-208ENST00000475912 PLA2G4EQ3MJ16 856 aa9.21□□□□□ -0.94
PRKD3-208ENST00000475912 GPAT2Q6NUI2 795 aa9.21□□□□□ -0.94
PRKD3-208ENST00000475912 ABTB2Q8N961 1025 aa9.21□□□□□ -0.94
PRKD3-208ENST00000475912 ITGB2P05107 769 aa9.2□□□□□ -0.94
PRKD3-208ENST00000475912 MLLT1Q03111 559 aaPredicted RBP9.2□□□□□ -0.94
PRKD3-208ENST00000475912 COL9A3Q14050 684 aaPredicted RBP9.2□□□□□ -0.94
PRKD3-208ENST00000475912 PHLDB3Q6NSJ2 640 aa9.2□□□□□ -0.94
PRKD3-208ENST00000475912 HELQQ8TDG4 1101 aa9.2□□□□□ -0.94
PRKD3-208ENST00000475912 NUDT8Q8WV74 236 aa9.2□□□□□ -0.94
PRKD3-208ENST00000475912 PRDM6Q9NQX0 595 aa9.2□□□□□ -0.94
PRKD3-208ENST00000475912 ZBTB42B2RXF5 422 aa9.19□□□□□ -0.94
PRKD3-208ENST00000475912 PSAPL1Q6NUJ1 521 aa9.19□□□□□ -0.94
PRKD3-208ENST00000475912 ALYREFQ86V81 257 aaKnown RBP9.19□□□□□ -0.94
PRKD3-208ENST00000475912 GPR152Q8TDT2 470 aa9.19□□□□□ -0.94
PRKD3-208ENST00000475912 GTF3C2Q8WUA4 911 aaPredicted RBP9.19□□□□□ -0.94
PRKD3-208ENST00000475912 PIK3R5Q8WYR1 880 aa9.19□□□□□ -0.94
PRKD3-208ENST00000475912 JPH1Q9HDC5 661 aaPredicted RBP9.19□□□□□ -0.94
PRKD3-208ENST00000475912 FAM13BQ9NYF5 915 aa9.19□□□□□ -0.94
PRKD3-208ENST00000475912 UBAP1LF5GYI3 381 aa9.18□□□□□ -0.94
PRKD3-208ENST00000475912 LILRB5O75023 590 aa9.18□□□□□ -0.94
PRKD3-208ENST00000475912 IGHA1P01876 353 aa9.18□□□□□ -0.94
PRKD3-208ENST00000475912 CPB1P15086 417 aa9.18□□□□□ -0.94
PRKD3-208ENST00000475912 FAM35AQ86V20 835 aa9.18□□□□□ -0.94
PRKD3-208ENST00000475912 ATCAYQ86WG3 371 aa9.18□□□□□ -0.94
PRKD3-208ENST00000475912 USTQ9Y2C2 406 aa9.18□□□□□ -0.94
PRKD3-208ENST00000475912 MMP20O60882 483 aa9.17□□□□□ -0.94
PRKD3-208ENST00000475912 NID1P14543 1247 aa9.17□□□□□ -0.94
PRKD3-208ENST00000475912 GPLD1P80108 840 aa9.17□□□□□ -0.94
PRKD3-208ENST00000475912 MTMR3Q13615 1198 aa9.17□□□□□ -0.94
PRKD3-208ENST00000475912 PCSK7Q16549 785 aa9.17□□□□□ -0.94
PRKD3-208ENST00000475912 HFE2Q6ZVN8 426 aa9.17□□□□□ -0.94
PRKD3-208ENST00000475912 TRPM4Q8TD43 1214 aa9.17□□□□□ -0.94
PRKD3-208ENST00000475912 TLR7Q9NYK1 1049 aaKnown RBP9.17□□□□□ -0.94
PRKD3-208ENST00000475912 NACADO15069 1562 aa9.16□□□□□ -0.94
PRKD3-208ENST00000475912 NLRP13Q86W25 1043 aa9.16□□□□□ -0.94
PRKD3-208ENST00000475912 FAM229AH3BQW9 127 aa9.15□□□□□ -0.94
PRKD3-208ENST00000475912 PSAPP07602 524 aa9.15□□□□□ -0.94
PRKD3-208ENST00000475912 MPSTP25325 297 aa9.15□□□□□ -0.94
PRKD3-208ENST00000475912 ARID4AP29374 1257 aaPredicted RBP9.15□□□□□ -0.94
PRKD3-208ENST00000475912 NRLP54845 237 aa9.15□□□□□ -0.94
PRKD3-208ENST00000475912 PERM1Q5SV97 790 aa9.15□□□□□ -0.94
PRKD3-208ENST00000475912 LPIN3Q9BQK8 851 aa9.15□□□□□ -0.94
PRKD3-208ENST00000475912 SPDYE3A6NKU9 549 aa9.14□□□□□ -0.95
PRKD3-208ENST00000475912 RGS9O75916 674 aaPredicted RBP9.14□□□□□ -0.95
PRKD3-208ENST00000475912 AFF1P51825 1210 aaKnown RBP9.14□□□□□ -0.95
PRKD3-208ENST00000475912 PLAURQ03405 335 aa9.14□□□□□ -0.95
PRKD3-208ENST00000475912 RETREG2Q8NC44 543 aa9.14□□□□□ -0.95
PRKD3-208ENST00000475912 NSUN5Q96P11 429 aaKnown RBP9.14□□□□□ -0.95
PRKD3-208ENST00000475912 EIF2AK2P19525 551 aaKnown RBP9.13□□□□□ -0.95
PRKD3-208ENST00000475912 NOM1Q5C9Z4 860 aaKnown RBP9.13□□□□□ -0.95
PRKD3-208ENST00000475912 ELMSAN1Q6PJG2 1045 aa9.13□□□□□ -0.95
PRKD3-208ENST00000475912 EDEM1Q92611 657 aa9.13□□□□□ -0.95
PRKD3-208ENST00000475912 NUDT16Q96DE0 195 aaKnown RBP9.13□□□□□ -0.95
PRKD3-208ENST00000475912 SPOCK3Q9BQ16 436 aa9.13□□□□□ -0.95
PRKD3-208ENST00000475912 FNDC3AQ9Y2H6 1198 aaKnown RBP9.13□□□□□ -0.95
PRKD3-208ENST00000475912 BICRAQ9NZM4 1560 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 J3QW42 95 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 MSTNO14793 375 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 ABL1P00519 1130 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 SPATA31C1P0DKV0 1188 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 CHRNA4P43681 627 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 EIF1AXP47813 144 aaKnown RBP9.12□□□□□ -0.95
PRKD3-208ENST00000475912 PRRT3Q5FWE3 981 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 TRAPPC3LQ5T215 181 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 ANO2Q9NQ90 1003 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 FRRS1LQ9P0K9 344 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 MTMR7Q9Y216 660 aa9.12□□□□□ -0.95
PRKD3-208ENST00000475912 LOC102724428A0A0B4J2F2 783 aa9.11□□□□□ -0.95
PRKD3-208ENST00000475912 C1QTNF9BB2RNN3 333 aa9.11□□□□□ -0.95
PRKD3-208ENST00000475912 PROCP04070 461 aa9.11□□□□□ -0.95
PRKD3-208ENST00000475912 SOX18P35713 384 aa9.11□□□□□ -0.95
PRKD3-208ENST00000475912 SIK1P57059 783 aa9.11□□□□□ -0.95
PRKD3-208ENST00000475912 DNM1Q05193 864 aaKnown RBP9.11□□□□□ -0.95
PRKD3-208ENST00000475912 ZNF211Q13398 564 aaPredicted RBP9.11□□□□□ -0.95
PRKD3-208ENST00000475912 CD163Q86VB7 1156 aa9.11□□□□□ -0.95
PRKD3-208ENST00000475912 SMG9Q9H0W8 520 aaKnown RBP9.11□□□□□ -0.95
PRKD3-208ENST00000475912 UNC13AQ9UPW8 1703 aa9.11□□□□□ -0.95
PRKD3-208ENST00000475912 TRIM28Q13263 835 aaKnown RBP9.1□□□□□ -0.95
PRKD3-208ENST00000475912 GRIK5Q16478 980 aa9.1□□□□□ -0.95
PRKD3-208ENST00000475912 OR13H1Q8NG92 308 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 96.1 ms