RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 SLC51AQ86UW1 340 aa9.44□□□□□ -0.9
UBE4B-208ENST00000475795 NLRP3Q96P20 1036 aa9.44□□□□□ -0.9
UBE4B-208ENST00000475795 UTP14AQ9BVJ6 771 aaKnown RBP9.44□□□□□ -0.9
UBE4B-208ENST00000475795 DDX60Q8IY21 1712 aaKnown RBP9.44□□□□□ -0.9
UBE4B-208ENST00000475795 ABCC4O15439 1325 aa9.43□□□□□ -0.9
UBE4B-208ENST00000475795 MYBBP1AQ9BQG0 1328 aaKnown RBP9.43□□□□□ -0.9
UBE4B-208ENST00000475795 GSE1Q14687 1217 aa9.43□□□□□ -0.9
UBE4B-208ENST00000475795 HSP90AB3PQ58FF7 597 aa9.43□□□□□ -0.9
UBE4B-208ENST00000475795 MAP1SQ66K74 1059 aaPredicted RBP9.43□□□□□ -0.9
UBE4B-208ENST00000475795 CNTROBQ8N137 903 aa9.43□□□□□ -0.9
UBE4B-208ENST00000475795 LARGE2Q8N3Y3 721 aa9.43□□□□□ -0.9
UBE4B-208ENST00000475795 PHF12Q96QT6 1004 aa9.43□□□□□ -0.9
UBE4B-208ENST00000475795 GJA3Q9Y6H8 435 aa9.43□□□□□ -0.9
UBE4B-208ENST00000475795 LRRC37AA6NMS7 1700 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 CHL1O00533 1208 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 TCERG1O14776 1098 aaKnown RBP9.42□□□□□ -0.9
UBE4B-208ENST00000475795 PPIP5K2O43314 1243 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 LMOD1P29536 600 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-208ENST00000475795 SCNN1DP51172 638 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 COPS6Q7L5N1 327 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 NIM1KQ8IY84 436 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 CCDC146Q8IYE0 955 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 XAGE3Q8WTP9 111 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 TMX4Q9H1E5 349 aaPredicted RBP9.42□□□□□ -0.9
UBE4B-208ENST00000475795 VPS33BQ9H267 617 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 DDX21Q9NR30 783 aaKnown RBP eCLIP9.42□□□□□ -0.9
UBE4B-208ENST00000475795 ATP6V0A2Q9Y487 856 aa9.42□□□□□ -0.9
UBE4B-208ENST00000475795 RASSF10A6NK89 507 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 EPS15P42566 896 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 VEGFBP49765 207 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 AIMP1Q12904 312 aaKnown RBP9.41□□□□□ -0.9
UBE4B-208ENST00000475795 TCIRG1Q13488 830 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 NEUROD2Q15784 382 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 KRT24Q2M2I5 525 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 NLRP10Q86W26 655 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 SP7Q8TDD2 431 aaPredicted RBP9.41□□□□□ -0.9
UBE4B-208ENST00000475795 NECTIN2Q92692 538 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 RUNDC1Q96C34 613 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 RTFDC1Q9BY42 306 aaPredicted RBP9.41□□□□□ -0.9
UBE4B-208ENST00000475795 TRIM35Q9UPQ4 493 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 THSD7BQ9C0I4 1608 aa9.41□□□□□ -0.9
UBE4B-208ENST00000475795 SH3TC1Q8TE82 1336 aa9.4□□□□□ -0.9
UBE4B-208ENST00000475795 FOXN1O15353 648 aa9.4□□□□□ -0.9
UBE4B-208ENST00000475795 BBOX1O75936 387 aa9.4□□□□□ -0.9
UBE4B-208ENST00000475795 HOXB7P09629 217 aa9.4□□□□□ -0.9
UBE4B-208ENST00000475795 HCLS1P14317 486 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-208ENST00000475795 DDX10Q13206 875 aaKnown RBP9.4□□□□□ -0.9
UBE4B-208ENST00000475795 AOC3Q16853 763 aa9.4□□□□□ -0.9
UBE4B-208ENST00000475795 USP50Q70EL3 339 aaPredicted RBP9.4□□□□□ -0.9
UBE4B-208ENST00000475795 SP8Q8IXZ3 490 aa9.4□□□□□ -0.9
UBE4B-208ENST00000475795 SUPT20HQ8NEM7 779 aa9.4□□□□□ -0.9
UBE4B-208ENST00000475795 CHPF2Q9P2E5 772 aa9.4□□□□□ -0.9
UBE4B-208ENST00000475795 TRMT112Q9UI30 125 aaKnown RBP9.4□□□□□ -0.9
UBE4B-208ENST00000475795 DUOX1Q9NRD9 1551 aa9.4□□□□□ -0.9
UBE4B-208ENST00000475795 POLR2AP24928 1970 aaKnown RBP9.39□□□□□ -0.91
UBE4B-208ENST00000475795 GRAPQ13588 217 aa9.39□□□□□ -0.91
UBE4B-208ENST00000475795 WDR43Q15061 677 aaKnown RBP eCLIP9.39□□□□□ -0.91
UBE4B-208ENST00000475795 DEFB115Q30KQ5 88 aa9.39□□□□□ -0.91
UBE4B-208ENST00000475795 HDGFL1Q5TGJ6 251 aa9.39□□□□□ -0.91
UBE4B-208ENST00000475795 DPP8Q6V1X1 898 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-208ENST00000475795 DDX46Q7L014 1031 aaKnown RBP9.39□□□□□ -0.91
UBE4B-208ENST00000475795 ZNF579Q8NAF0 562 aaKnown RBP9.39□□□□□ -0.91
UBE4B-208ENST00000475795 GRAPLQ8TC17 118 aaPredicted RBP9.39□□□□□ -0.91
UBE4B-208ENST00000475795 AIDAQ96BJ3 306 aa9.39□□□□□ -0.91
UBE4B-208ENST00000475795 ZNRF3Q9ULT6 936 aa9.39□□□□□ -0.91
UBE4B-208ENST00000475795 LAS1LQ9Y4W2 734 aaKnown RBP9.39□□□□□ -0.91
UBE4B-208ENST00000475795 WDR33Q9C0J8 1336 aaKnown RBP9.38□□□□□ -0.91
UBE4B-208ENST00000475795 PYGBP11216 843 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 CTCFP49711 727 aaPredicted RBP9.38□□□□□ -0.91
UBE4B-208ENST00000475795 CXCL9Q07325 125 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 KIAA2012Q0VF49 1180 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 TMC4Q7Z404 712 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 MPNDQ8N594 471 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 PLBD2Q8NHP8 589 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 PRDM10Q9NQV6 1147 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 ADARB2Q9NS39 739 aaKnown RBP9.38□□□□□ -0.91
UBE4B-208ENST00000475795 WBP1LQ9NX94 342 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 GPRC5DQ9NZD1 345 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 DBF4Q9UBU7 674 aaPredicted RBP9.38□□□□□ -0.91
UBE4B-208ENST00000475795 ABT1Q9ULW3 272 aaKnown RBP9.38□□□□□ -0.91
UBE4B-208ENST00000475795 ADAMTS8Q9UP79 889 aa9.38□□□□□ -0.91
UBE4B-208ENST00000475795 CDHR2Q9BYE9 1310 aa9.37□□□□□ -0.91
UBE4B-208ENST00000475795 COL4A1P02462 1669 aa9.37□□□□□ -0.91
UBE4B-208ENST00000475795 GMPSP49915 693 aaPredicted RBP9.37□□□□□ -0.91
UBE4B-208ENST00000475795 FMR1Q06787 632 aaKnown RBP eCLIP9.37□□□□□ -0.917e-6■□□□□ 8.9
UBE4B-208ENST00000475795 CIAPIN1Q6FI81 312 aa9.37□□□□□ -0.91
UBE4B-208ENST00000475795 ANKRD13DQ6ZTN6 518 aa9.37□□□□□ -0.91
UBE4B-208ENST00000475795 CFAP44Q96MT7 982 aa9.37□□□□□ -0.91
UBE4B-208ENST00000475795 ISCA1Q9BUE6 129 aa9.37□□□□□ -0.91
UBE4B-208ENST00000475795 SCN9AQ15858 1988 aa9.36□□□□□ -0.91
UBE4B-208ENST00000475795 TRAF5O00463 557 aa9.36□□□□□ -0.91
UBE4B-208ENST00000475795 TNIP1Q15025 636 aa9.36□□□□□ -0.91
UBE4B-208ENST00000475795 SF3B3Q15393 1217 aaKnown RBP9.36□□□□□ -0.91
UBE4B-208ENST00000475795 DUSP27Q5VZP5 1158 aa9.36□□□□□ -0.91
UBE4B-208ENST00000475795 CST9Q5W186 159 aa9.36□□□□□ -0.91
UBE4B-208ENST00000475795 MBIPQ9NS73 344 aa9.36□□□□□ -0.91
UBE4B-208ENST00000475795 HYPKQ9NX55 129 aa9.36□□□□□ -0.91
UBE4B-208ENST00000475795 MYH3P11055 1940 aa9.36□□□□□ -0.91
UBE4B-208ENST00000475795 PSME4Q14997 1843 aa9.35□□□□□ -0.91
UBE4B-208ENST00000475795 YDJCA8MPS7 323 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms