RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 ZNF408Q9H9D4 720 aa23.83■■□□□ 1.41
RNF220-212ENST00000475378 PPP2R1AP30153 589 aa23.82■■□□□ 1.4
RNF220-212ENST00000475378 KIAA2012Q0VF49 1180 aa23.82■■□□□ 1.4
RNF220-212ENST00000475378 PARP10Q53GL7 1025 aa23.82■■□□□ 1.4
RNF220-212ENST00000475378 CDC37L1Q7L3B6 337 aa23.82■■□□□ 1.4
RNF220-212ENST00000475378 NOGQ13253 232 aa23.81■■□□□ 1.4
RNF220-212ENST00000475378 TMX4Q9H1E5 349 aaPredicted RBP23.81■■□□□ 1.4
RNF220-212ENST00000475378 DUOX1Q9NRD9 1551 aa23.81■■□□□ 1.4
RNF220-212ENST00000475378 AKAP11Q9UKA4 1901 aa23.8■■□□□ 1.4
RNF220-212ENST00000475378 LRRC37AA6NMS7 1700 aa23.8■■□□□ 1.4
RNF220-212ENST00000475378 RAD17O75943 681 aa23.8■■□□□ 1.4
RNF220-212ENST00000475378 LRP10Q7Z4F1 713 aa23.8■■□□□ 1.4
RNF220-212ENST00000475378 SP8Q8IXZ3 490 aa23.8■■□□□ 1.4
RNF220-212ENST00000475378 ERBB4Q15303 1308 aa23.8■■□□□ 1.4
RNF220-212ENST00000475378 SHTN1A0MZ66 631 aa23.79■■□□□ 1.4
RNF220-212ENST00000475378 TNIP1Q15025 636 aa23.79■■□□□ 1.4
RNF220-212ENST00000475378 DPP8Q6V1X1 898 aaPredicted RBP23.79■■□□□ 1.4
RNF220-212ENST00000475378 BCL2L13Q9BXK5 485 aa23.79■■□□□ 1.4
RNF220-212ENST00000475378 YDJCA8MPS7 323 aa23.78■■□□□ 1.4
RNF220-212ENST00000475378 BBOX1O75936 387 aa23.78■■□□□ 1.4
RNF220-212ENST00000475378 MPNDQ8N594 471 aa23.78■■□□□ 1.4
RNF220-212ENST00000475378 CCER1Q8TC90 406 aaPredicted RBP23.78■■□□□ 1.4
RNF220-212ENST00000475378 UTP14AQ9BVJ6 771 aaKnown RBP23.78■■□□□ 1.4
RNF220-212ENST00000475378 CNOT7Q9UIV1 285 aaKnown RBP23.78■■□□□ 1.4
RNF220-212ENST00000475378 HUNKP57058 714 aa23.77■■□□□ 1.4
RNF220-212ENST00000475378 FAM155AB1AL88 458 aaPredicted RBP23.76■■□□□ 1.39
RNF220-212ENST00000475378 DLK2Q6UY11 383 aa23.76■■□□□ 1.39
RNF220-212ENST00000475378 USP48Q86UV5 1035 aa23.76■■□□□ 1.39
RNF220-212ENST00000475378 PDIA6Q15084 440 aa23.75■■□□□ 1.39
RNF220-212ENST00000475378 THUMPD2Q9BTF0 503 aaKnown RBP23.75■■□□□ 1.39
RNF220-212ENST00000475378 MICALL2Q8IY33 904 aa23.74■■□□□ 1.39
RNF220-212ENST00000475378 H7C1D1 291 aa23.73■■□□□ 1.39
RNF220-212ENST00000475378 PLEKHF1Q96S99 279 aa23.73■■□□□ 1.39
RNF220-212ENST00000475378 SAGE1Q9NXZ1 904 aa23.73■■□□□ 1.39
RNF220-212ENST00000475378 DDX60Q8IY21 1712 aaKnown RBP23.73■■□□□ 1.39
RNF220-212ENST00000475378 RGMBQ6NW40 437 aa23.72■■□□□ 1.39
RNF220-212ENST00000475378 DPF2Q92785 391 aa23.72■■□□□ 1.39
RNF220-212ENST00000475378 ZBTB12Q9Y330 459 aaPredicted RBP23.72■■□□□ 1.39
RNF220-212ENST00000475378 HCLS1P14317 486 aaPredicted RBP23.71■■□□□ 1.39
RNF220-212ENST00000475378 GRAPQ13588 217 aa23.71■■□□□ 1.39
RNF220-212ENST00000475378 PROSER3Q2NL68 480 aa23.71■■□□□ 1.39
RNF220-212ENST00000475378 SAMD7Q7Z3H4 446 aa23.71■■□□□ 1.39
RNF220-212ENST00000475378 GRAPLQ8TC17 118 aaPredicted RBP23.71■■□□□ 1.39
RNF220-212ENST00000475378 DDX46Q7L014 1031 aaKnown RBP23.7■■□□□ 1.38
RNF220-212ENST00000475378 NLRP10Q86W26 655 aa23.7■■□□□ 1.38
RNF220-212ENST00000475378 GBA2Q9HCG7 927 aaPredicted RBP23.7■■□□□ 1.38
RNF220-212ENST00000475378 PSMD14O00487 310 aa23.69■■□□□ 1.38
RNF220-212ENST00000475378 EGFRP00533 1210 aa23.69■■□□□ 1.38
RNF220-212ENST00000475378 SOX10P56693 466 aa23.69■■□□□ 1.38
RNF220-212ENST00000475378 KIF23Q02241 960 aaPredicted RBP23.69■■□□□ 1.38
RNF220-212ENST00000475378 NFE2L2Q16236 605 aa23.69■■□□□ 1.38
RNF220-212ENST00000475378 KRT26Q7Z3Y9 468 aa23.69■■□□□ 1.38
RNF220-212ENST00000475378 SCN9AQ15858 1988 aa23.69■■□□□ 1.38
RNF220-212ENST00000475378 ANXA1P04083 346 aa23.68■■□□□ 1.38
RNF220-212ENST00000475378 CCDC102AQ96A19 550 aa23.68■■□□□ 1.38
RNF220-212ENST00000475378 RNF186Q9NXI6 227 aa23.68■■□□□ 1.38
RNF220-212ENST00000475378 NEFMP07197 916 aa23.67■■□□□ 1.38
RNF220-212ENST00000475378 TBC1D10BQ4KMP7 808 aaPredicted RBP23.67■■□□□ 1.38
RNF220-212ENST00000475378 TMC4Q7Z404 712 aa23.67■■□□□ 1.38
RNF220-212ENST00000475378 C2orf69Q8N8R5 385 aa23.67■■□□□ 1.38
RNF220-212ENST00000475378 COL4A1P02462 1669 aa23.67■■□□□ 1.38
RNF220-212ENST00000475378 ADM5C9JUS6 153 aa23.66■■□□□ 1.38
RNF220-212ENST00000475378 EIF2S2P20042 333 aaKnown RBP23.66■■□□□ 1.38
RNF220-212ENST00000475378 HSP90AB3PQ58FF7 597 aa23.66■■□□□ 1.38
RNF220-212ENST00000475378 TRPA1O75762 1119 aa23.65■■□□□ 1.38
RNF220-212ENST00000475378 DBNDD1Q9H9R9 158 aa23.65■■□□□ 1.38
RNF220-212ENST00000475378 TRMT112Q9UI30 125 aaKnown RBP23.65■■□□□ 1.38
RNF220-212ENST00000475378 SH3TC1Q8TE82 1336 aa23.64■■□□□ 1.38
RNF220-212ENST00000475378 SLC10A3P09131 477 aa23.64■■□□□ 1.37
RNF220-212ENST00000475378 ZNF157P51786 506 aaPredicted RBP23.64■■□□□ 1.37
RNF220-212ENST00000475378 TCIRG1Q13488 830 aa23.64■■□□□ 1.37
RNF220-212ENST00000475378 WASHC4Q2M389 1173 aa23.64■■□□□ 1.37
RNF220-212ENST00000475378 COPS6Q7L5N1 327 aa23.64■■□□□ 1.37
RNF220-212ENST00000475378 TSPYL4Q9UJ04 414 aa23.64■■□□□ 1.37
RNF220-212ENST00000475378 RTL9Q8NET4 1388 aa23.64■■□□□ 1.37
RNF220-212ENST00000475378 RPS12P25398 132 aaKnown RBP23.63■■□□□ 1.37
RNF220-212ENST00000475378 DCPSQ96C86 337 aaKnown RBP23.63■■□□□ 1.37
RNF220-212ENST00000475378 CSRNP1Q96S65 589 aa23.63■■□□□ 1.37
RNF220-212ENST00000475378 PSME4Q14997 1843 aa23.62■■□□□ 1.37
RNF220-212ENST00000475378 XAGE3Q8WTP9 111 aa23.62■■□□□ 1.37
RNF220-212ENST00000475378 KCNQ5Q9NR82 932 aa23.62■■□□□ 1.37
RNF220-212ENST00000475378 POLLQ9UGP5 575 aa23.62■■□□□ 1.37
RNF220-212ENST00000475378 PRPF38BQ5VTL8 546 aaKnown RBP23.61■■□□□ 1.37
RNF220-212ENST00000475378 CTU1Q7Z7A3 348 aaKnown RBP23.61■■□□□ 1.37
RNF220-212ENST00000475378 AIMP1Q12904 312 aaKnown RBP23.6■■□□□ 1.37
RNF220-212ENST00000475378 RBM26Q5T8P6 1007 aaKnown RBP23.6■■□□□ 1.37
RNF220-212ENST00000475378 CELF1Q92879 486 aaKnown RBP23.6■■□□□ 1.37
RNF220-212ENST00000475378 NSFL1CQ9UNZ2 370 aaKnown RBP23.6■■□□□ 1.37
RNF220-212ENST00000475378 RIMBP2O15034 1052 aa23.59■■□□□ 1.37
RNF220-212ENST00000475378 ECE2O60344 883 aa23.59■■□□□ 1.37
RNF220-212ENST00000475378 KIF4BQ2VIQ3 1234 aa23.59■■□□□ 1.37
RNF220-212ENST00000475378 GPSM2P81274 684 aa23.58■■□□□ 1.37
RNF220-212ENST00000475378 SF3B3Q15393 1217 aaKnown RBP23.58■■□□□ 1.37
RNF220-212ENST00000475378 BABAM1Q9NWV8 329 aa23.58■■□□□ 1.37
RNF220-212ENST00000475378 GGA3Q9NZ52 723 aa23.58■■□□□ 1.37
RNF220-212ENST00000475378 ASTN2O75129 1339 aaPredicted RBP23.58■■□□□ 1.36
RNF220-212ENST00000475378 DOK7Q18PE1 504 aa23.57■■□□□ 1.36
RNF220-212ENST00000475378 RASAL3Q86YV0 1011 aa23.57■■□□□ 1.36
RNF220-212ENST00000475378 NECTIN2Q92692 538 aa23.57■■□□□ 1.36
RNF220-212ENST00000475378 PAPPA2Q9BXP8 1791 aa23.57■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms