RNA–Protein interactions for RNA: ENST00000472577.1

PKD1-208, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 2

Gene PKD1, Length 1,140 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-208ENST00000472577 CAPN15O75808 1086 aa21.87■■□□□ 1.09
PKD1-208ENST00000472577 SOGA3Q5TF21 947 aa21.87■■□□□ 1.09
PKD1-208ENST00000472577 TNS4Q8IZW8 715 aa21.87■■□□□ 1.09
PKD1-208ENST00000472577 CWC25Q9NXE8 425 aaPredicted RBP21.87■■□□□ 1.09
PKD1-208ENST00000472577 NOB1Q9ULX3 412 aaKnown RBP21.87■■□□□ 1.09
PKD1-208ENST00000472577 RIC1Q4ADV7 1423 aa21.87■■□□□ 1.09
PKD1-208ENST00000472577 SH3TC1Q8TE82 1336 aa21.86■■□□□ 1.09
PKD1-208ENST00000472577 ZNF541Q9H0D2 1346 aa21.86■■□□□ 1.09
PKD1-208ENST00000472577 CCDC93Q567U6 631 aa21.86■■□□□ 1.09
PKD1-208ENST00000472577 SLC10A5Q5PT55 438 aa21.86■■□□□ 1.09
PKD1-208ENST00000472577 BEND3Q5T5X7 828 aa21.86■■□□□ 1.09
PKD1-208ENST00000472577 LINS1Q8NG48 757 aa21.86■■□□□ 1.09
PKD1-208ENST00000472577 FAM89AQ96GI7 184 aa21.86■■□□□ 1.09
PKD1-208ENST00000472577 SCN4AP35499 1836 aa21.85■■□□□ 1.09
PKD1-208ENST00000472577 KLRG2A4D1S0 409 aaPredicted RBP21.85■■□□□ 1.09
PKD1-208ENST00000472577 NPR1P16066 1061 aa21.85■■□□□ 1.09
PKD1-208ENST00000472577 RTL5Q5HYW3 569 aaPredicted RBP21.85■■□□□ 1.09
PKD1-208ENST00000472577 ZNF277Q9NRM2 450 aaPredicted RBP21.85■■□□□ 1.09
PKD1-208ENST00000472577 DDX60Q8IY21 1712 aaKnown RBP21.84■■□□□ 1.09
PKD1-208ENST00000472577 SNED1Q8TER0 1413 aa21.84■■□□□ 1.09
PKD1-208ENST00000472577 SLC4A10Q6U841 1118 aa21.84■■□□□ 1.09
PKD1-208ENST00000472577 C3orf67Q6ZVT6 689 aa21.84■■□□□ 1.09
PKD1-208ENST00000472577 JARID2Q92833 1246 aaPredicted RBP21.84■■□□□ 1.09
PKD1-208ENST00000472577 L3MBTL3Q96JM7 780 aaPredicted RBP21.84■■□□□ 1.09
PKD1-208ENST00000472577 CREBZFQ9NS37 354 aa21.84■■□□□ 1.09
PKD1-208ENST00000472577 MKRN1Q9UHC7 482 aaKnown RBP21.84■■□□□ 1.09
PKD1-208ENST00000472577 ADAMTSL1Q8N6G6 1762 aa21.84■■□□□ 1.09
PKD1-208ENST00000472577 KIF16BQ96L93 1317 aa21.83■■□□□ 1.09
PKD1-208ENST00000472577 PCCAP05165 728 aaPredicted RBP21.83■■□□□ 1.09
PKD1-208ENST00000472577 HCLS1P14317 486 aaPredicted RBP21.83■■□□□ 1.09
PKD1-208ENST00000472577 FKBP4Q02790 459 aaKnown RBP eCLIP21.83■■□□□ 1.09
PKD1-208ENST00000472577 ZBTB38Q8NAP3 1195 aaPredicted RBP21.83■■□□□ 1.09
PKD1-208ENST00000472577 LAMB2P55268 1798 aa21.82■■□□□ 1.08
PKD1-208ENST00000472577 GCKRQ14397 625 aa21.82■■□□□ 1.08
PKD1-208ENST00000472577 TAF1DQ9H5J8 278 aaPredicted RBP21.82■■□□□ 1.08
PKD1-208ENST00000472577 COL4A5P29400 1685 aa21.82■■□□□ 1.08
PKD1-208ENST00000472577 PASKQ96RG2 1323 aa21.81■■□□□ 1.08
PKD1-208ENST00000472577 CRY2Q49AN0 593 aa21.81■■□□□ 1.08
PKD1-208ENST00000472577 IQCA1LA6NCM1 817 aa21.8■■□□□ 1.08
PKD1-208ENST00000472577 IRS4O14654 1257 aaPredicted RBP21.8■■□□□ 1.08
PKD1-208ENST00000472577 SLC51AQ86UW1 340 aa21.8■■□□□ 1.08
PKD1-208ENST00000472577 LDHDQ86WU2 507 aa21.8■■□□□ 1.08
PKD1-208ENST00000472577 ARHGAP45Q92619 1136 aa21.8■■□□□ 1.08
PKD1-208ENST00000472577 NLRP3Q96P20 1036 aa21.8■■□□□ 1.08
PKD1-208ENST00000472577 API5Q9BZZ5 524 aaKnown RBP21.8■■□□□ 1.08
PKD1-208ENST00000472577 SRCIN1Q9C0H9 1055 aa21.8■■□□□ 1.08
PKD1-208ENST00000472577 CNTNAP1P78357 1384 aa21.79■■□□□ 1.08
PKD1-208ENST00000472577 H7C1W4 665 aa21.79■■□□□ 1.08
PKD1-208ENST00000472577 FRAT1Q92837 279 aaPredicted RBP21.79■■□□□ 1.08
PKD1-208ENST00000472577 TNNQ9UQP3 1299 aa21.79■■□□□ 1.08
PKD1-208ENST00000472577 CDHR2Q9BYE9 1310 aa21.79■■□□□ 1.08
PKD1-208ENST00000472577 ALDH1L1O75891 902 aa21.78■■□□□ 1.08
PKD1-208ENST00000472577 CASP7P55210 303 aa21.78■■□□□ 1.08
PKD1-208ENST00000472577 TRIM27P14373 513 aa21.77■■□□□ 1.08
PKD1-208ENST00000472577 EAPPQ56P03 285 aaPredicted RBP21.77■■□□□ 1.08
PKD1-208ENST00000472577 UBE3BQ7Z3V4 1068 aa21.77■■□□□ 1.08
PKD1-208ENST00000472577 RCAN3Q9UKA8 241 aa21.77■■□□□ 1.08
PKD1-208ENST00000472577 IPO8O15397 1037 aaKnown RBP21.76■■□□□ 1.07
PKD1-208ENST00000472577 IARSP41252 1262 aaKnown RBP21.76■■□□□ 1.07
PKD1-208ENST00000472577 LTBP1Q14766 1721 aa21.76■■□□□ 1.07
PKD1-208ENST00000472577 ATF7IPQ6VMQ6 1270 aa21.76■■□□□ 1.07
PKD1-208ENST00000472577 ITGBL1O95965 494 aaPredicted RBP21.75■■□□□ 1.07
PKD1-208ENST00000472577 HOXA10P31260 410 aaPredicted RBP21.75■■□□□ 1.07
PKD1-208ENST00000472577 ZKSCAN2Q63HK3 967 aa21.75■■□□□ 1.07
PKD1-208ENST00000472577 RTKN2Q8IZC4 609 aa21.75■■□□□ 1.07
PKD1-208ENST00000472577 RPGRQ92834 1020 aaKnown RBP21.75■■□□□ 1.07
PKD1-208ENST00000472577 ABCC4O15439 1325 aa21.75■■□□□ 1.07
PKD1-208ENST00000472577 FZD9O00144 591 aa21.74■■□□□ 1.07
PKD1-208ENST00000472577 GRM8O00222 908 aa21.74■■□□□ 1.07
PKD1-208ENST00000472577 PDE8AO60658 829 aa21.74■■□□□ 1.07
PKD1-208ENST00000472577 EPHX2P34913 555 aa21.74■■□□□ 1.07
PKD1-208ENST00000472577 SF3B3Q15393 1217 aaKnown RBP21.74■■□□□ 1.07
PKD1-208ENST00000472577 HACL1Q9UJ83 578 aa21.74■■□□□ 1.07
PKD1-208ENST00000472577 FOXN1O15353 648 aa21.73■■□□□ 1.07
PKD1-208ENST00000472577 ALDH1B1P30837 517 aa21.73■■□□□ 1.07
PKD1-208ENST00000472577 CCT4P50991 539 aaKnown RBP21.73■■□□□ 1.07
PKD1-208ENST00000472577 RBM17Q96I25 401 aaKnown RBP21.73■■□□□ 1.07
PKD1-208ENST00000472577 HSP90B1P14625 803 aaKnown RBP21.72■■□□□ 1.07
PKD1-208ENST00000472577 CLUAP1Q96AJ1 413 aa21.72■■□□□ 1.07
PKD1-208ENST00000472577 CRAMP1Q96RY5 1269 aa21.72■■□□□ 1.07
PKD1-208ENST00000472577 C9orf78Q9NZ63 289 aaPredicted RBP21.72■■□□□ 1.07
PKD1-208ENST00000472577 NBPF7P0C2Y1 421 aaPredicted RBP21.71■■□□□ 1.07
PKD1-208ENST00000472577 INTS3Q68E01 1043 aaKnown RBP21.71■■□□□ 1.07
PKD1-208ENST00000472577 PSMD1Q99460 953 aa21.71■■□□□ 1.07
PKD1-208ENST00000472577 PLA2G12BQ9BX93 195 aa21.71■■□□□ 1.07
PKD1-208ENST00000472577 COL4A1P02462 1669 aa21.71■■□□□ 1.07
PKD1-208ENST00000472577 UTYO14607 1347 aa21.71■■□□□ 1.07
PKD1-208ENST00000472577 MYH3P11055 1940 aa21.7■■□□□ 1.07
PKD1-208ENST00000472577 TMEM88BA6NKF7 163 aa21.7■■□□□ 1.06
PKD1-208ENST00000472577 VEGFBP49765 207 aa21.7■■□□□ 1.06
PKD1-208ENST00000472577 CTSWP56202 376 aa21.7■■□□□ 1.06
PKD1-208ENST00000472577 MAP1SQ66K74 1059 aaPredicted RBP21.7■■□□□ 1.06
PKD1-208ENST00000472577 USP44Q9H0E7 712 aa21.7■■□□□ 1.06
PKD1-208ENST00000472577 CLEC11AQ9Y240 323 aa21.7■■□□□ 1.06
PKD1-208ENST00000472577 TAF1P21675 1872 aa21.7■■□□□ 1.06
PKD1-208ENST00000472577 DDX46Q7L014 1031 aaKnown RBP21.69■■□□□ 1.06
PKD1-208ENST00000472577 GPC2Q8N158 579 aa21.69■■□□□ 1.06
PKD1-208ENST00000472577 TTLL11Q8NHH1 800 aa21.69■■□□□ 1.06
PKD1-208ENST00000472577 CCDC85AQ96PX6 553 aaPredicted RBP21.69■■□□□ 1.06
PKD1-208ENST00000472577 FOXO4P98177 505 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms