RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 GOLGA6L22H0YM25 854 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 HIP1O00291 1037 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 BAG4O95429 457 aaKnown RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 CYP19A1P11511 503 aaPredicted RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 ATP5JP18859 108 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 NCLP19338 710 aaKnown RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 ADCK5Q3MIX3 580 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 ATG9AQ7Z3C6 839 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 CHAMP1Q96JM3 812 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 PLSCR2Q9NRY7 297 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 RBM8AQ9Y5S9 174 aaKnown RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 GLI3P10071 1580 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 LAMB4A4D0S4 1761 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 TNS2Q63HR2 1409 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 EYA2O00167 538 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 IL15P40933 162 aaPredicted RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 AK2P54819 239 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 SLFNL1Q499Z3 407 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 GORABQ5T7V8 394 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 GIGYF2Q6Y7W6 1299 aaKnown RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 SEC62Q99442 399 aaKnown RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 CEP126Q9P2H0 1117 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 TRMT112Q9UI30 125 aaKnown RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 TOGARAM1Q9Y4F4 1720 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 CCDC171Q6TFL3 1326 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 MAP3K15Q6ZN16 1313 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 JCADQ9P266 1359 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 GOLIM4O00461 696 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 ZKSCAN1P17029 563 aaPredicted RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 ATP6V1AP38606 617 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 CCDC129Q6ZRS4 1044 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 ZNF589Q86UQ0 364 aaPredicted RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 DZIP3Q86Y13 1208 aaKnown RBP5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 SPATA31A1Q5TZJ5 1347 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 SPATA31A6Q5VVP1 1343 aa5.85□□□□□ -1.47
TM4SF1-202ENST00000472441 BCL9O00512 1426 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 UBR2Q8IWV8 1755 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 A0A1B0GUL7 405 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 EPB41L2O43491 1005 aaKnown RBP5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 FKBP4Q02790 459 aaKnown RBP eCLIP5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 IFIT5Q13325 482 aaKnown RBP5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 CREB3L3Q68CJ9 461 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 PPP4R3CPQ6ZMV5 832 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 MARCH10Q8NA82 808 aaPredicted RBP5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 ZBTB38Q8NAP3 1195 aaPredicted RBP5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 TCEANC2Q96MN5 208 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 C8orf37Q96NL8 207 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 SNRKQ9NRH2 765 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 PDRG1Q9NUG6 133 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 LRP6O75581 1613 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 UBAP1LF5GYI3 381 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 KCNQ2O43526 872 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 PCCAP05165 728 aaPredicted RBP5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 IFIT1P09914 478 aaKnown RBP5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 NECTIN1Q15223 517 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 FAM98CQ17RN3 349 aaKnown RBP5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 NLRP10Q86W26 655 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 MAP4K1Q92918 833 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 NGLY1Q96IV0 654 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 BRPF3Q9ULD4 1205 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 ZDHHC9Q9Y397 364 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 CYP46A1Q9Y6A2 500 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 DDX49Q9Y6V7 483 aaKnown RBP5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 ITGB4P16144 1822 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 CENPFP49454 3210 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 DISP2A7MBM2 1401 aa5.84□□□□□ -1.47
TM4SF1-202ENST00000472441 IRS4O14654 1257 aaPredicted RBP5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 CUL4AQ13619 759 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 LDHAL6AQ6ZMR3 332 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 RUFY3Q7L099 469 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 HAUS7Q99871 368 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 GREM2Q9H772 168 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 PAG1Q9NWQ8 432 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 LIMCH1Q9UPQ0 1083 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 COL15A1P39059 1388 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 CICQ96RK0 1608 aaPredicted RBP5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 GOLGA6L3A6NEY3 463 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 SLC27A2O14975 620 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 PRPF40AO75400 957 aaKnown RBP5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 ITGA6P23229 1130 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 ADORA1P30542 326 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 TRIM28Q13263 835 aaKnown RBP5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 HSP90AB3PQ58FF7 597 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 METTL24Q5JXM2 366 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 TTC39AQ5SRH9 613 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 RNF20Q5VTR2 975 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 CDCA7Q9BWT1 371 aaPredicted RBP5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 CNNM1Q9NRU3 951 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 TAF6LQ9Y6J9 622 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 SLIT2O94813 1529 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 LOC102724428A0A0B4J2F2 783 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 TAF5LO75529 589 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 LARGE1O95461 756 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 CYP2E1P05181 493 aaPredicted RBP5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 CRKLP46109 303 aaKnown RBP5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 SIK1P57059 783 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 PAPPAQ13219 1627 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 COL9A3Q14050 684 aaPredicted RBP5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 CCDC158Q5M9N0 1113 aa5.83□□□□□ -1.48
TM4SF1-202ENST00000472441 CCDC83Q8IWF9 413 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms