RNA–Protein interactions for RNA: ENST00000471414.1

COPS3-206, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-206ENST00000471414 BRD2P25440 801 aaKnown RBP6.57□□□□□ -1.36
COPS3-206ENST00000471414 CD163Q86VB7 1156 aa6.57□□□□□ -1.36
COPS3-206ENST00000471414 USP20Q9Y2K6 914 aa6.57□□□□□ -1.36
COPS3-206ENST00000471414 C1QTNF9BB2RNN3 333 aa6.56□□□□□ -1.36
COPS3-206ENST00000471414 ATP2B4P23634 1241 aa6.56□□□□□ -1.36
COPS3-206ENST00000471414 CHRNA4P43681 627 aa6.56□□□□□ -1.36
COPS3-206ENST00000471414 GPLD1P80108 840 aa6.56□□□□□ -1.36
COPS3-206ENST00000471414 TRIP4Q15650 581 aaPredicted RBP6.56□□□□□ -1.36
COPS3-206ENST00000471414 GRIK5Q16478 980 aa6.56□□□□□ -1.36
COPS3-206ENST00000471414 DHX32Q7L7V1 743 aaKnown RBP6.56□□□□□ -1.36
COPS3-206ENST00000471414 PNMA5Q96PV4 448 aa6.56□□□□□ -1.36
COPS3-206ENST00000471414 MKNK1Q9BUB5 465 aa6.56□□□□□ -1.36
COPS3-206ENST00000471414 FRRS1LQ9P0K9 344 aa6.56□□□□□ -1.36
COPS3-206ENST00000471414 XYLBO75191 536 aa6.55□□□□□ -1.36
COPS3-206ENST00000471414 SASH3O75995 380 aa6.55□□□□□ -1.36
COPS3-206ENST00000471414 TARSP26639 723 aaKnown RBP6.55□□□□□ -1.36
COPS3-206ENST00000471414 SUZ12Q15022 739 aaKnown RBP6.55□□□□□ -1.36
COPS3-206ENST00000471414 PCSK7Q16549 785 aa6.55□□□□□ -1.36
COPS3-206ENST00000471414 C14orf37Q86TY3 774 aa6.55□□□□□ -1.36
COPS3-206ENST00000471414 SPDYE3A6NKU9 549 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 LILRB5O75023 590 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 RARAP10276 462 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 SSFA2P28290 1259 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 SOX18P35713 384 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 AFF1P51825 1210 aaKnown RBP6.54□□□□□ -1.36
COPS3-206ENST00000471414 NRLP54845 237 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 NAA30Q147X3 362 aaPredicted RBP6.54□□□□□ -1.36
COPS3-206ENST00000471414 RGL4Q8IZJ4 473 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 TTC9Q92623 222 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 LPIN3Q9BQK8 851 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 TLR7Q9NYK1 1049 aaKnown RBP6.54□□□□□ -1.36
COPS3-206ENST00000471414 STIM2Q9P246 746 aa6.54□□□□□ -1.36
COPS3-206ENST00000471414 ZBTB39O15060 712 aa6.53□□□□□ -1.36
COPS3-206ENST00000471414 PSAPL1Q6NUJ1 521 aa6.53□□□□□ -1.36
COPS3-206ENST00000471414 KRT25Q7Z3Z0 450 aa6.53□□□□□ -1.36
COPS3-206ENST00000471414 SEPT3Q9UH03 358 aa6.53□□□□□ -1.36
COPS3-206ENST00000471414 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
COPS3-206ENST00000471414 ZAP70P43403 619 aa6.52□□□□□ -1.37
COPS3-206ENST00000471414 BAG6P46379 1132 aa6.52□□□□□ -1.37
COPS3-206ENST00000471414 PLAURQ03405 335 aa6.52□□□□□ -1.37
COPS3-206ENST00000471414 PERM1Q5SV97 790 aa6.52□□□□□ -1.37
COPS3-206ENST00000471414 PHLDB3Q6NSJ2 640 aa6.52□□□□□ -1.37
COPS3-206ENST00000471414 FAM35AQ86V20 835 aa6.52□□□□□ -1.37
COPS3-206ENST00000471414 KRTAP4-6Q9BYQ5 205 aa6.52□□□□□ -1.37
COPS3-206ENST00000471414 IGFLR1Q9H665 355 aa6.52□□□□□ -1.37
COPS3-206ENST00000471414 JPH1Q9HDC5 661 aaPredicted RBP6.52□□□□□ -1.37
COPS3-206ENST00000471414 MMP20O60882 483 aa6.51□□□□□ -1.37
COPS3-206ENST00000471414 SCNN1AP37088 669 aa6.51□□□□□ -1.37
COPS3-206ENST00000471414 TBC1D8BQ0IIM8 1120 aa6.51□□□□□ -1.37
COPS3-206ENST00000471414 PRRT3Q5FWE3 981 aa6.51□□□□□ -1.37
COPS3-206ENST00000471414 NLRP13Q86W25 1043 aa6.51□□□□□ -1.37
COPS3-206ENST00000471414 CMTR1Q8N1G2 835 aaKnown RBP6.51□□□□□ -1.37
COPS3-206ENST00000471414 ABTB2Q8N961 1025 aa6.51□□□□□ -1.37
COPS3-206ENST00000471414 HELQQ8TDG4 1101 aa6.51□□□□□ -1.37
COPS3-206ENST00000471414 NUDT8Q8WV74 236 aa6.51□□□□□ -1.37
COPS3-206ENST00000471414 A0A0A0MRY4 1105 aa6.5□□□□□ -1.37
COPS3-206ENST00000471414 FAM229AH3BQW9 127 aa6.5□□□□□ -1.37
COPS3-206ENST00000471414 ADAM23O75077 832 aa6.5□□□□□ -1.37
COPS3-206ENST00000471414 CPB1P15086 417 aa6.5□□□□□ -1.37
COPS3-206ENST00000471414 PIK3R5Q8WYR1 880 aa6.5□□□□□ -1.37
COPS3-206ENST00000471414 FAM13BQ9NYF5 915 aa6.5□□□□□ -1.37
COPS3-206ENST00000471414 RGS9O75916 674 aaPredicted RBP6.49□□□□□ -1.37
COPS3-206ENST00000471414 ELNP15502 786 aa6.49□□□□□ -1.37
COPS3-206ENST00000471414 NPR3P17342 541 aa6.49□□□□□ -1.37
COPS3-206ENST00000471414 OR13H1Q8NG92 308 aa6.49□□□□□ -1.37
COPS3-206ENST00000471414 UBAP1LF5GYI3 381 aa6.48□□□□□ -1.37
COPS3-206ENST00000471414 SELPP16109 830 aa6.48□□□□□ -1.37
COPS3-206ENST00000471414 ARID4AP29374 1257 aaPredicted RBP6.48□□□□□ -1.37
COPS3-206ENST00000471414 MLLT1Q03111 559 aaPredicted RBP6.48□□□□□ -1.37
COPS3-206ENST00000471414 TRIM28Q13263 835 aaKnown RBP6.48□□□□□ -1.37
COPS3-206ENST00000471414 MSL1Q68DK7 614 aa6.48□□□□□ -1.37
COPS3-206ENST00000471414 DTWD1Q8N5C7 304 aa6.48□□□□□ -1.37
COPS3-206ENST00000471414 LOC102724428A0A0B4J2F2 783 aa6.47□□□□□ -1.37
COPS3-206ENST00000471414 KIF4AO95239 1232 aa6.47□□□□□ -1.37
COPS3-206ENST00000471414 PSAPP07602 524 aa6.47□□□□□ -1.37
COPS3-206ENST00000471414 SIK1P57059 783 aa6.47□□□□□ -1.37
COPS3-206ENST00000471414 ELMSAN1Q6PJG2 1045 aa6.47□□□□□ -1.37
COPS3-206ENST00000471414 FMR1NBQ8N0W7 255 aaPredicted RBP6.47□□□□□ -1.37
COPS3-206ENST00000471414 GPR152Q8TDT2 470 aa6.47□□□□□ -1.37
COPS3-206ENST00000471414 SMG9Q9H0W8 520 aaKnown RBP6.47□□□□□ -1.37
COPS3-206ENST00000471414 CARNS1A5YM72 827 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 ITGB7P26010 798 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 ADGRE1Q14246 886 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 GRIK4Q16099 956 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 TRAPPC3LQ5T215 181 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 COL13A1Q5TAT6 717 aaPredicted RBP6.46□□□□□ -1.38
COPS3-206ENST00000471414 PDE12Q6L8Q7 609 aaKnown RBP6.46□□□□□ -1.38
COPS3-206ENST00000471414 XKR5Q6UX68 686 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 HFE2Q6ZVN8 426 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 ATCAYQ86WG3 371 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 GTF3C2Q8WUA4 911 aaPredicted RBP6.46□□□□□ -1.38
COPS3-206ENST00000471414 LENG1Q96BZ8 264 aaPredicted RBP6.46□□□□□ -1.38
COPS3-206ENST00000471414 NACC1Q96RE7 527 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 USTQ9Y2C2 406 aa6.46□□□□□ -1.38
COPS3-206ENST00000471414 J3QW42 95 aa6.45□□□□□ -1.38
COPS3-206ENST00000471414 EIF2AK2P19525 551 aaKnown RBP6.45□□□□□ -1.38
COPS3-206ENST00000471414 GATA4P43694 442 aa6.45□□□□□ -1.38
COPS3-206ENST00000471414 ERICH6Q7L0X2 663 aa6.45□□□□□ -1.38
COPS3-206ENST00000471414 FBXO11Q86XK2 927 aa6.45□□□□□ -1.38
COPS3-206ENST00000471414 DMRTC2Q8IXT2 367 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms