RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 PLAURQ03405 335 aa10.1□□□□□ -0.79
PRPF40A-206ENST00000471167 PLA2G4EQ3MJ16 856 aa10.1□□□□□ -0.79
PRPF40A-206ENST00000471167 CMTR1Q8N1G2 835 aaKnown RBP10.1□□□□□ -0.79
PRPF40A-206ENST00000471167 ZNF417Q8TAU3 575 aa10.1□□□□□ -0.79
PRPF40A-206ENST00000471167 ZNF587Q96SQ5 575 aaPredicted RBP10.1□□□□□ -0.79
PRPF40A-206ENST00000471167 IGFLR1Q9H665 355 aa10.1□□□□□ -0.79
PRPF40A-206ENST00000471167 XYLBO75191 536 aa10.09□□□□□ -0.79
PRPF40A-206ENST00000471167 NID1P14543 1247 aa10.09□□□□□ -0.79
PRPF40A-206ENST00000471167 ALAS2P22557 587 aa10.09□□□□□ -0.79
PRPF40A-206ENST00000471167 ATCAYQ86WG3 371 aa10.09□□□□□ -0.79
PRPF40A-206ENST00000471167 UBE2OQ9C0C9 1292 aaKnown RBP10.09□□□□□ -0.79
PRPF40A-206ENST00000471167 PRDM6Q9NQX0 595 aa10.09□□□□□ -0.79
PRPF40A-206ENST00000471167 EPB42P16452 691 aa10.08□□□□□ -0.8
PRPF40A-206ENST00000471167 ZAP70P43403 619 aa10.08□□□□□ -0.8
PRPF40A-206ENST00000471167 NEUROD1Q13562 356 aa10.08□□□□□ -0.8
PRPF40A-206ENST00000471167 MTMR3Q13615 1198 aa10.08□□□□□ -0.8
PRPF40A-206ENST00000471167 TBC1D8BQ0IIM8 1120 aa10.07□□□□□ -0.8
PRPF40A-206ENST00000471167 ERICH6Q7L0X2 663 aa10.07□□□□□ -0.8
PRPF40A-206ENST00000471167 DHX32Q7L7V1 743 aaKnown RBP10.07□□□□□ -0.8
PRPF40A-206ENST00000471167 TRPM4Q8TD43 1214 aa10.07□□□□□ -0.8
PRPF40A-206ENST00000471167 HELQQ8TDG4 1101 aa10.07□□□□□ -0.8
PRPF40A-206ENST00000471167 GTF3C2Q8WUA4 911 aaPredicted RBP10.07□□□□□ -0.8
PRPF40A-206ENST00000471167 PLVAPQ9BX97 442 aa10.07□□□□□ -0.8
PRPF40A-206ENST00000471167 MMP20O60882 483 aa10.06□□□□□ -0.8
PRPF40A-206ENST00000471167 GRIK5Q16478 980 aa10.06□□□□□ -0.8
PRPF40A-206ENST00000471167 GPR152Q8TDT2 470 aa10.06□□□□□ -0.8
PRPF40A-206ENST00000471167 PNMA5Q96PV4 448 aa10.06□□□□□ -0.8
PRPF40A-206ENST00000471167 RARAP10276 462 aa10.05□□□□□ -0.8
PRPF40A-206ENST00000471167 MLLT1Q03111 559 aaPredicted RBP10.05□□□□□ -0.8
PRPF40A-206ENST00000471167 LPIN3Q9BQK8 851 aa10.05□□□□□ -0.8
PRPF40A-206ENST00000471167 TLR7Q9NYK1 1049 aaKnown RBP10.05□□□□□ -0.8
PRPF40A-206ENST00000471167 PROCP04070 461 aa10.04□□□□□ -0.8
PRPF40A-206ENST00000471167 PERM1Q5SV97 790 aa10.04□□□□□ -0.8
PRPF40A-206ENST00000471167 NUDT8Q8WV74 236 aa10.04□□□□□ -0.8
PRPF40A-206ENST00000471167 AFF1P51825 1210 aaKnown RBP10.03□□□□□ -0.8
PRPF40A-206ENST00000471167 ECM1Q16610 540 aa10.03□□□□□ -0.8
PRPF40A-206ENST00000471167 GPAT2Q6NUI2 795 aa10.03□□□□□ -0.8
PRPF40A-206ENST00000471167 PSAPL1Q6NUJ1 521 aa10.03□□□□□ -0.8
PRPF40A-206ENST00000471167 HFE2Q6ZVN8 426 aa10.03□□□□□ -0.8
PRPF40A-206ENST00000471167 RETREG2Q8NC44 543 aa10.03□□□□□ -0.8
PRPF40A-206ENST00000471167 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.03□□□□□ -0.8
PRPF40A-206ENST00000471167 CPB1P15086 417 aa10.02□□□□□ -0.81
PRPF40A-206ENST00000471167 NPR3P17342 541 aa10.02□□□□□ -0.81
PRPF40A-206ENST00000471167 MPSTP25325 297 aa10.02□□□□□ -0.81
PRPF40A-206ENST00000471167 GPLD1P80108 840 aa10.02□□□□□ -0.81
PRPF40A-206ENST00000471167 COL13A1Q5TAT6 717 aaPredicted RBP10.02□□□□□ -0.81
PRPF40A-206ENST00000471167 USTQ9Y2C2 406 aa10.02□□□□□ -0.81
PRPF40A-206ENST00000471167 FAM229AH3BQW9 127 aa10.01□□□□□ -0.81
PRPF40A-206ENST00000471167 HOXD8P13378 290 aaPredicted RBP10.01□□□□□ -0.81
PRPF40A-206ENST00000471167 FAM35AQ86V20 835 aa10.01□□□□□ -0.81
PRPF40A-206ENST00000471167 GGNBP2Q9H3C7 697 aa10.01□□□□□ -0.81
PRPF40A-206ENST00000471167 J3QW42 95 aa10□□□□□ -0.81
PRPF40A-206ENST00000471167 CHRNA4P43681 627 aa10□□□□□ -0.81
PRPF40A-206ENST00000471167 NRLP54845 237 aa10□□□□□ -0.81
PRPF40A-206ENST00000471167 CD163Q86VB7 1156 aa10□□□□□ -0.81
PRPF40A-206ENST00000471167 NLRP13Q86W25 1043 aa10□□□□□ -0.81
PRPF40A-206ENST00000471167 PIK3R5Q8WYR1 880 aa10□□□□□ -0.81
PRPF40A-206ENST00000471167 SPOCK3Q9BQ16 436 aa10□□□□□ -0.81
PRPF40A-206ENST00000471167 JPH1Q9HDC5 661 aaPredicted RBP10□□□□□ -0.81
PRPF40A-206ENST00000471167 UBAP1LF5GYI3 381 aa9.99□□□□□ -0.81
PRPF40A-206ENST00000471167 EIF1AXP47813 144 aaKnown RBP9.99□□□□□ -0.81
PRPF40A-206ENST00000471167 ABTB2Q8N961 1025 aa9.99□□□□□ -0.81
PRPF40A-206ENST00000471167 NUDT16Q96DE0 195 aaKnown RBP9.99□□□□□ -0.81
PRPF40A-206ENST00000471167 ANO2Q9NQ90 1003 aa9.99□□□□□ -0.81
PRPF40A-206ENST00000471167 A6NHS1 94 aa9.98□□□□□ -0.81
PRPF40A-206ENST00000471167 C1QTNF9BB2RNN3 333 aa9.98□□□□□ -0.81
PRPF40A-206ENST00000471167 LILRB5O75023 590 aa9.98□□□□□ -0.81
PRPF40A-206ENST00000471167 ADAMTSL4Q6UY14 1074 aa9.98□□□□□ -0.81
PRPF40A-206ENST00000471167 LOC102724428A0A0B4J2F2 783 aa9.97□□□□□ -0.81
PRPF40A-206ENST00000471167 CYP2E1P05181 493 aaPredicted RBP9.97□□□□□ -0.81
PRPF40A-206ENST00000471167 SIK1P57059 783 aa9.97□□□□□ -0.81
PRPF40A-206ENST00000471167 ALYREFQ86V81 257 aaKnown RBP9.97□□□□□ -0.81
PRPF40A-206ENST00000471167 OR13H1Q8NG92 308 aa9.97□□□□□ -0.81
PRPF40A-206ENST00000471167 EDEM1Q92611 657 aa9.97□□□□□ -0.81
PRPF40A-206ENST00000471167 NOP53Q9NZM5 478 aaKnown RBP9.97□□□□□ -0.81
PRPF40A-206ENST00000471167 TMEM63CQ9P1W3 806 aa9.97□□□□□ -0.81
PRPF40A-206ENST00000471167 FZD6O60353 706 aa9.96□□□□□ -0.82
PRPF40A-206ENST00000471167 PDGFAP04085 211 aa9.96□□□□□ -0.82
PRPF40A-206ENST00000471167 SOX18P35713 384 aa9.96□□□□□ -0.82
PRPF40A-206ENST00000471167 BAG6P46379 1132 aa9.96□□□□□ -0.82
PRPF40A-206ENST00000471167 ZNF211Q13398 564 aaPredicted RBP9.96□□□□□ -0.82
PRPF40A-206ENST00000471167 NOM1Q5C9Z4 860 aaKnown RBP9.96□□□□□ -0.82
PRPF40A-206ENST00000471167 NSUN5Q96P11 429 aaKnown RBP9.96□□□□□ -0.82
PRPF40A-206ENST00000471167 FRRS1LQ9P0K9 344 aa9.96□□□□□ -0.82
PRPF40A-206ENST00000471167 CNTN3Q9P232 1028 aa9.96□□□□□ -0.82
PRPF40A-206ENST00000471167 PIK3R2O00459 728 aa9.95□□□□□ -0.82
PRPF40A-206ENST00000471167 RGS9O75916 674 aaPredicted RBP9.95□□□□□ -0.82
PRPF40A-206ENST00000471167 SERPINB4P48594 390 aa9.95□□□□□ -0.82
PRPF40A-206ENST00000471167 TTC9Q92623 222 aa9.95□□□□□ -0.82
PRPF40A-206ENST00000471167 A0A0A0MRY4 1105 aa9.94□□□□□ -0.82
PRPF40A-206ENST00000471167 DNM1Q05193 864 aaKnown RBP9.94□□□□□ -0.82
PRPF40A-206ENST00000471167 GRIK4Q16099 956 aa9.94□□□□□ -0.82
PRPF40A-206ENST00000471167 PCSK7Q16549 785 aa9.94□□□□□ -0.82
PRPF40A-206ENST00000471167 DMRTC2Q8IXT2 367 aaPredicted RBP9.94□□□□□ -0.82
PRPF40A-206ENST00000471167 SMG9Q9H0W8 520 aaKnown RBP9.94□□□□□ -0.82
PRPF40A-206ENST00000471167 ELP3Q9H9T3 547 aa9.94□□□□□ -0.82
PRPF40A-206ENST00000471167 FAM13BQ9NYF5 915 aa9.94□□□□□ -0.82
PRPF40A-206ENST00000471167 IGHA1P01876 353 aa9.93□□□□□ -0.82
PRPF40A-206ENST00000471167 PSAPP07602 524 aa9.93□□□□□ -0.82
PRPF40A-206ENST00000471167 SPATA31C1P0DKV0 1188 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms