RNA–Protein interactions for RNA: ENST00000470661.1

PTP4A1-202, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2

Gene PTP4A1, Length 479 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-202ENST00000470661 FOXR1Q6PIV2 292 aa10.34□□□□□ -0.75
PTP4A1-202ENST00000470661 BICDL1Q6ZP65 573 aa10.34□□□□□ -0.75
PTP4A1-202ENST00000470661 PRIMPOLQ96LW4 560 aa10.34□□□□□ -0.75
PTP4A1-202ENST00000470661 RRP7BPQ9NSQ0 103 aa10.34□□□□□ -0.75
PTP4A1-202ENST00000470661 PRMT3O60678 531 aa10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 IGFBP4P22692 258 aa10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 HIRAP54198 1017 aaPredicted RBP10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 UBAP2LQ14157 1087 aaKnown RBP10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 FAM50AQ14320 339 aaKnown RBP10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 NGLY1Q96IV0 654 aa10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 ZIC5Q96T25 663 aa10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 C2orf49Q9BVC5 232 aaPredicted RBP10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 PHACTR1Q9C0D0 580 aa10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 ZMYM3Q14202 1370 aa10.33□□□□□ -0.76
PTP4A1-202ENST00000470661 INO80Q9ULG1 1556 aaPredicted RBP10.32□□□□□ -0.76
PTP4A1-202ENST00000470661 CCDC141Q6ZP82 1450 aa10.32□□□□□ -0.76
PTP4A1-202ENST00000470661 DHX29Q7Z478 1369 aaKnown RBP10.32□□□□□ -0.76
PTP4A1-202ENST00000470661 WEE1P30291 646 aa10.32□□□□□ -0.76
PTP4A1-202ENST00000470661 POTEAQ6S8J7 498 aa10.32□□□□□ -0.76
PTP4A1-202ENST00000470661 TRERF1Q96PN7 1200 aa10.32□□□□□ -0.76
PTP4A1-202ENST00000470661 AGLP35573 1532 aa10.32□□□□□ -0.76
PTP4A1-202ENST00000470661 MYOM3Q5VTT5 1437 aa10.32□□□□□ -0.76
PTP4A1-202ENST00000470661 LBRQ14739 615 aaKnown RBP10.31□□□□□ -0.76
PTP4A1-202ENST00000470661 SWI5Q1ZZU3 235 aa10.31□□□□□ -0.76
PTP4A1-202ENST00000470661 RHPN1Q8TCX5 695 aa10.31□□□□□ -0.76
PTP4A1-202ENST00000470661 MAP3K1Q13233 1512 aa10.3□□□□□ -0.76
PTP4A1-202ENST00000470661 PPP1R15AO75807 674 aaPredicted RBP10.3□□□□□ -0.76
PTP4A1-202ENST00000470661 ITGAEP38570 1179 aa10.3□□□□□ -0.76
PTP4A1-202ENST00000470661 LRRC69Q6ZNQ3 347 aa10.3□□□□□ -0.76
PTP4A1-202ENST00000470661 STAG2Q8N3U4 1231 aa10.3□□□□□ -0.76
PTP4A1-202ENST00000470661 ABHD17AQ96GS6 310 aa10.3□□□□□ -0.76
PTP4A1-202ENST00000470661 GJA3Q9Y6H8 435 aa10.3□□□□□ -0.76
PTP4A1-202ENST00000470661 C3P01024 1663 aa10.3□□□□□ -0.76
PTP4A1-202ENST00000470661 REREQ9P2R6 1566 aa10.3□□□□□ -0.76
PTP4A1-202ENST00000470661 ALDH16A1Q8IZ83 802 aa10.29□□□□□ -0.76
PTP4A1-202ENST00000470661 C7orf43Q8WVR3 580 aa10.29□□□□□ -0.76
PTP4A1-202ENST00000470661 ZCCHC2Q9C0B9 1178 aaKnown RBP10.29□□□□□ -0.76
PTP4A1-202ENST00000470661 SLAIN2Q9P270 581 aa10.29□□□□□ -0.76
PTP4A1-202ENST00000470661 ABCC5O15440 1437 aa10.29□□□□□ -0.76
PTP4A1-202ENST00000470661 CLTCQ00610 1675 aaKnown RBP10.28□□□□□ -0.76
PTP4A1-202ENST00000470661 RTEL1-TNFRSF6BF6WH68 1400 aa10.28□□□□□ -0.76
PTP4A1-202ENST00000470661 BNIP3LO60238 219 aa10.28□□□□□ -0.76
PTP4A1-202ENST00000470661 OCLNQ16625 522 aa10.28□□□□□ -0.76
PTP4A1-202ENST00000470661 C1orf53Q5VUE5 145 aa10.28□□□□□ -0.76
PTP4A1-202ENST00000470661 NLRP8Q86W28 1048 aa10.28□□□□□ -0.76
PTP4A1-202ENST00000470661 WASHC2CQ9Y4E1 1318 aa10.28□□□□□ -0.76
PTP4A1-202ENST00000470661 PLXNC1O60486 1568 aa10.27□□□□□ -0.76
PTP4A1-202ENST00000470661 DCDC2BA2VCK2 349 aa10.27□□□□□ -0.77
PTP4A1-202ENST00000470661 ATXN7O15265 892 aaPredicted RBP10.27□□□□□ -0.77
PTP4A1-202ENST00000470661 FKBP5Q13451 457 aaPredicted RBP10.27□□□□□ -0.77
PTP4A1-202ENST00000470661 HSH2DQ96JZ2 352 aa10.27□□□□□ -0.77
PTP4A1-202ENST00000470661 NDFIP2Q9NV92 336 aa10.27□□□□□ -0.77
PTP4A1-202ENST00000470661 PCDHGC4Q9Y5F7 938 aa10.27□□□□□ -0.77
PTP4A1-202ENST00000470661 ADGBQ8N7X0 1667 aa10.27□□□□□ -0.77
PTP4A1-202ENST00000470661 FGD6Q6ZV73 1430 aa10.26□□□□□ -0.77
PTP4A1-202ENST00000470661 CARNS1A5YM72 827 aa10.26□□□□□ -0.77
PTP4A1-202ENST00000470661 FOXO3O43524 673 aa10.26□□□□□ -0.77
PTP4A1-202ENST00000470661 FIGNL1Q6PIW4 674 aa10.26□□□□□ -0.77
PTP4A1-202ENST00000470661 VTI1AQ96AJ9 217 aa10.26□□□□□ -0.77
PTP4A1-202ENST00000470661 NEUROD4Q9HD90 331 aa10.26□□□□□ -0.77
PTP4A1-202ENST00000470661 MBIPQ9NS73 344 aa10.26□□□□□ -0.77
PTP4A1-202ENST00000470661 PTPN23Q9H3S7 1636 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 PTPRKQ15262 1439 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 UHRF1BP1Q6BDS2 1440 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 MIA2Q96PC5 1412 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 SETD1BQ9UPS6 1966 aaKnown RBP10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 MX2P20592 715 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 LORP23490 312 aaPredicted RBP10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 ZNF280CQ8ND82 737 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 CFHR5Q9BXR6 569 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 HCN2Q9UL51 889 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 ATXN7L1Q9ULK2 861 aaPredicted RBP10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 PHF24Q9UPV7 400 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 ARHGEF5Q12774 1597 aa10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 CFAP65Q6ZU64 1925 aaKnown RBP10.25□□□□□ -0.77
PTP4A1-202ENST00000470661 KHNYNO15037 678 aaKnown RBP10.24□□□□□ -0.77
PTP4A1-202ENST00000470661 ADAMTS2O95450 1211 aa10.24□□□□□ -0.77
PTP4A1-202ENST00000470661 INSM1Q01101 510 aaPredicted RBP10.24□□□□□ -0.77
PTP4A1-202ENST00000470661 CLP1Q92989 425 aaKnown RBP10.24□□□□□ -0.77
PTP4A1-202ENST00000470661 SUSD3Q96L08 255 aa10.24□□□□□ -0.77
PTP4A1-202ENST00000470661 MKNK1Q9BUB5 465 aa10.24□□□□□ -0.77
PTP4A1-202ENST00000470661 QTRT2Q9H974 415 aaKnown RBP10.24□□□□□ -0.77
PTP4A1-202ENST00000470661 CXXC1Q9P0U4 656 aaPredicted RBP10.24□□□□□ -0.77
PTP4A1-202ENST00000470661 DAPK1P53355 1430 aa10.24□□□□□ -0.77
PTP4A1-202ENST00000470661 TMEM88BA6NKF7 163 aa10.23□□□□□ -0.77
PTP4A1-202ENST00000470661 FGFR3P22607 806 aa10.23□□□□□ -0.77
PTP4A1-202ENST00000470661 RTN1Q16799 776 aa10.23□□□□□ -0.77
PTP4A1-202ENST00000470661 GPC6Q9Y625 555 aaPredicted RBP10.23□□□□□ -0.77
PTP4A1-202ENST00000470661 KIF15Q9NS87 1388 aa10.23□□□□□ -0.77
PTP4A1-202ENST00000470661 CNTLNQ9NXG0 1405 aa10.23□□□□□ -0.77
PTP4A1-202ENST00000470661 PREX1Q8TCU6 1659 aa10.22□□□□□ -0.77
PTP4A1-202ENST00000470661 STRCQ7RTU9 1775 aa10.22□□□□□ -0.77
PTP4A1-202ENST00000470661 MAPTP10636 758 aaKnown RBP10.22□□□□□ -0.77
PTP4A1-202ENST00000470661 CD33P20138 364 aa10.22□□□□□ -0.77
PTP4A1-202ENST00000470661 CTBSQ01459 385 aa10.22□□□□□ -0.77
PTP4A1-202ENST00000470661 SRSF11Q05519 484 aaKnown RBP10.22□□□□□ -0.77
PTP4A1-202ENST00000470661 TNP2Q05952 138 aa10.22□□□□□ -0.77
PTP4A1-202ENST00000470661 CAPN12Q6ZSI9 719 aa10.22□□□□□ -0.77
PTP4A1-202ENST00000470661 ZSCAN1Q8NBB4 408 aa10.22□□□□□ -0.77
PTP4A1-202ENST00000470661 KLK14Q9P0G3 267 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms