RNA–Protein interactions for RNA: ENST00000470179.5

PGAP1-208, Transcript of post-GPI attachment to proteins 1, humanhuman

TSL 2

Gene PGAP1, Length 2,874 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP1-208ENST00000470179 PPP4R3BQ5MIZ7 849 aa20.06■□□□□ 0.8
PGAP1-208ENST00000470179 KCNF1Q9H3M0 494 aa20.06■□□□□ 0.8
PGAP1-208ENST00000470179 KCNQ2O43526 872 aa20.05■□□□□ 0.8
PGAP1-208ENST00000470179 SNRPA1P09661 255 aaKnown RBP20.05■□□□□ 0.8
PGAP1-208ENST00000470179 SALL3Q9BXA9 1300 aa20.05■□□□□ 0.8
PGAP1-208ENST00000470179 CKAP2LQ8IYA6 745 aa20.05■□□□□ 0.8
PGAP1-208ENST00000470179 KAT6BQ8WYB5 2073 aa20.05■□□□□ 0.8
PGAP1-208ENST00000470179 NBPF7P0C2Y1 421 aaPredicted RBP20.05■□□□□ 0.8
PGAP1-208ENST00000470179 CASTP20810 708 aaKnown RBP20.05■□□□□ 0.8
PGAP1-208ENST00000470179 SNX14Q9Y5W7 946 aa20.05■□□□□ 0.8
PGAP1-208ENST00000470179 CSPP1Q1MSJ5 1256 aa20.04■□□□□ 0.8
PGAP1-208ENST00000470179 USP44Q9H0E7 712 aa20.04■□□□□ 0.8
PGAP1-208ENST00000470179 MCCP23508 829 aa20.04■□□□□ 0.8
PGAP1-208ENST00000470179 LRMPQ12912 555 aa20.04■□□□□ 0.8
PGAP1-208ENST00000470179 SYTL4Q96C24 671 aaPredicted RBP20.04■□□□□ 0.8
PGAP1-208ENST00000470179 PPP1R42Q7Z4L9 355 aa20.03■□□□□ 0.8
PGAP1-208ENST00000470179 NRBP1Q9UHY1 535 aa20.03■□□□□ 0.8
PGAP1-208ENST00000470179 LY75O60449 1722 aa20.03■□□□□ 0.8
PGAP1-208ENST00000470179 PTH1RQ03431 593 aa20.03■□□□□ 0.8
PGAP1-208ENST00000470179 CCDC30Q5VVM6 783 aa20.03■□□□□ 0.8
PGAP1-208ENST00000470179 TEX13AQ9BXU3 409 aaPredicted RBP20.03■□□□□ 0.8
PGAP1-208ENST00000470179 TAF6LQ9Y6J9 622 aa20.03■□□□□ 0.8
PGAP1-208ENST00000470179 TJP1Q07157 1748 aa20.02■□□□□ 0.8
PGAP1-208ENST00000470179 U2AF2P26368 475 aaKnown RBP eCLIP20.02■□□□□ 0.82e-8■■□□□ 13.2
PGAP1-208ENST00000470179 FAM182BQ5T319 152 aa20.02■□□□□ 0.8
PGAP1-208ENST00000470179 MYRIPQ8NFW9 859 aa20.02■□□□□ 0.8
PGAP1-208ENST00000470179 STK31Q9BXU1 1019 aa20.02■□□□□ 0.8
PGAP1-208ENST00000470179 OSBPL3Q9H4L5 887 aa20.02■□□□□ 0.8
PGAP1-208ENST00000470179 PTPRCP08575 1304 aa20.02■□□□□ 0.8
PGAP1-208ENST00000470179 STX6O43752 255 aa20.02■□□□□ 0.8
PGAP1-208ENST00000470179 BCL2L12Q9HB09 334 aa20.02■□□□□ 0.8
PGAP1-208ENST00000470179 TFIP11Q9UBB9 837 aaKnown RBP20.02■□□□□ 0.8
PGAP1-208ENST00000470179 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.02■□□□□ 0.8
PGAP1-208ENST00000470179 LUZP1Q86V48 1076 aa20.01■□□□□ 0.79
PGAP1-208ENST00000470179 FOSBP53539 338 aa20.01■□□□□ 0.79
PGAP1-208ENST00000470179 PIBF1Q8WXW3 757 aa20.01■□□□□ 0.79
PGAP1-208ENST00000470179 PALLDQ8WX93 1383 aa20.01■□□□□ 0.79
PGAP1-208ENST00000470179 SRGAP3O43295 1099 aa20■□□□□ 0.79
PGAP1-208ENST00000470179 GJB2P29033 226 aa20■□□□□ 0.79
PGAP1-208ENST00000470179 PRPF40BQ6NWY9 871 aaKnown RBP20■□□□□ 0.79
PGAP1-208ENST00000470179 PA2G4Q9UQ80 394 aaKnown RBP20■□□□□ 0.79
PGAP1-208ENST00000470179 WDR33Q9C0J8 1336 aaKnown RBP20■□□□□ 0.79
PGAP1-208ENST00000470179 CHGBP05060 677 aa20■□□□□ 0.79
PGAP1-208ENST00000470179 ZSCAN22P10073 491 aaPredicted RBP20■□□□□ 0.79
PGAP1-208ENST00000470179 PTGS1P23219 599 aa20■□□□□ 0.79
PGAP1-208ENST00000470179 ATP8B2P98198 1209 aa20■□□□□ 0.79
PGAP1-208ENST00000470179 STK3Q13188 491 aa20■□□□□ 0.79
PGAP1-208ENST00000470179 HDGFL1Q5TGJ6 251 aa20■□□□□ 0.79
PGAP1-208ENST00000470179 RIOK3O14730 519 aaKnown RBP19.99■□□□□ 0.79
PGAP1-208ENST00000470179 SLC4A9Q96Q91 983 aa19.99■□□□□ 0.79
PGAP1-208ENST00000470179 RREB1Q92766 1687 aa19.99■□□□□ 0.79
PGAP1-208ENST00000470179 HSPA4P34932 840 aa19.99■□□□□ 0.79
PGAP1-208ENST00000470179 TERF1P54274 439 aa19.99■□□□□ 0.79
PGAP1-208ENST00000470179 PTF1AQ7RTS3 328 aa19.99■□□□□ 0.79
PGAP1-208ENST00000470179 FBXW7Q969H0 707 aa19.99■□□□□ 0.79
PGAP1-208ENST00000470179 SYAP1Q96A49 352 aaPredicted RBP19.99■□□□□ 0.79
PGAP1-208ENST00000470179 SMC3Q9UQE7 1217 aa19.99■□□□□ 0.79
PGAP1-208ENST00000470179 ZSCAN20P17040 1043 aaPredicted RBP19.98■□□□□ 0.79
PGAP1-208ENST00000470179 CCT4P50991 539 aaKnown RBP19.98■□□□□ 0.79
PGAP1-208ENST00000470179 CCDC183Q5T5S1 534 aa19.98■□□□□ 0.79
PGAP1-208ENST00000470179 RGPD3A6NKT7 1758 aaPredicted RBP19.98■□□□□ 0.79
PGAP1-208ENST00000470179 RGPD4Q7Z3J3 1758 aa19.98■□□□□ 0.79
PGAP1-208ENST00000470179 PRAMEF22A3QJZ6 481 aa19.98■□□□□ 0.79
PGAP1-208ENST00000470179 UBTFL1P0CB47 393 aaPredicted RBP19.98■□□□□ 0.79
PGAP1-208ENST00000470179 JAKMIP1Q96N16 626 aaKnown RBP19.98■□□□□ 0.79
PGAP1-208ENST00000470179 COL5A3P25940 1745 aaPredicted RBP19.98■□□□□ 0.79
PGAP1-208ENST00000470179 PTCD1O75127 700 aaKnown RBP19.97■□□□□ 0.79
PGAP1-208ENST00000470179 KDM4AO75164 1064 aa19.97■□□□□ 0.79
PGAP1-208ENST00000470179 LIG1P18858 919 aa19.97■□□□□ 0.79
PGAP1-208ENST00000470179 ST3GAL1Q11201 340 aa19.97■□□□□ 0.79
PGAP1-208ENST00000470179 CCDC94Q9BW85 323 aaPredicted RBP19.97■□□□□ 0.79
PGAP1-208ENST00000470179 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
PGAP1-208ENST00000470179 TNS1Q9HBL0 1735 aaKnown RBP19.97■□□□□ 0.79
PGAP1-208ENST00000470179 C16orf45Q96MC5 204 aaPredicted RBP19.97■□□□□ 0.79
PGAP1-208ENST00000470179 USP16Q9Y5T5 823 aa19.97■□□□□ 0.79
PGAP1-208ENST00000470179 LOC102724428A0A0B4J2F2 783 aa19.97■□□□□ 0.79
PGAP1-208ENST00000470179 F13A1P00488 732 aa19.97■□□□□ 0.79
PGAP1-208ENST00000470179 SIK1P57059 783 aa19.97■□□□□ 0.79
PGAP1-208ENST00000470179 PI4K2BQ8TCG2 481 aa19.97■□□□□ 0.79
PGAP1-208ENST00000470179 DBF4Q9UBU7 674 aaPredicted RBP19.97■□□□□ 0.79
PGAP1-208ENST00000470179 DDX11Q96FC9 970 aa19.96■□□□□ 0.79
PGAP1-208ENST00000470179 MCM5P33992 734 aa19.96■□□□□ 0.79
PGAP1-208ENST00000470179 CEBPZQ03701 1054 aaKnown RBP19.96■□□□□ 0.79
PGAP1-208ENST00000470179 OS9Q13438 667 aaPredicted RBP19.96■□□□□ 0.79
PGAP1-208ENST00000470179 PDIA6Q15084 440 aa19.96■□□□□ 0.79
PGAP1-208ENST00000470179 INTS4Q96HW7 963 aaKnown RBP19.96■□□□□ 0.79
PGAP1-208ENST00000470179 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.96■□□□□ 0.79
PGAP1-208ENST00000470179 V9GYY5 206 aaPredicted RBP19.96■□□□□ 0.79
PGAP1-208ENST00000470179 RHPN1Q8TCX5 695 aa19.95■□□□□ 0.78
PGAP1-208ENST00000470179 ERCC4Q92889 916 aaPredicted RBP19.95■□□□□ 0.78
PGAP1-208ENST00000470179 LSG1Q9H089 658 aaKnown RBP19.95■□□□□ 0.78
PGAP1-208ENST00000470179 DDX21Q9NR30 783 aaKnown RBP eCLIP19.95■□□□□ 0.78
PGAP1-208ENST00000470179 KIF3AQ9Y496 699 aa19.95■□□□□ 0.78
PGAP1-208ENST00000470179 ME3Q16798 604 aa19.94■□□□□ 0.78
PGAP1-208ENST00000470179 CDC37L1Q7L3B6 337 aa19.94■□□□□ 0.78
PGAP1-208ENST00000470179 TTC14Q96N46 770 aa19.94■□□□□ 0.78
PGAP1-208ENST00000470179 SGSM2O43147 1006 aa19.94■□□□□ 0.78
PGAP1-208ENST00000470179 ARID5BQ14865 1188 aa19.94■□□□□ 0.78
PGAP1-208ENST00000470179 LRP10Q7Z4F1 713 aa19.94■□□□□ 0.78
PGAP1-208ENST00000470179 TAOK2Q9UL54 1235 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms