RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 ERFEQ4G0M1 354 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 FILIP1LQ4L180 1135 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 SOGA3Q5TF21 947 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 NUTM2GQ5VZR2 741 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 VPS37AQ8NEZ2 397 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 TNPO1Q92973 898 aaKnown RBP6.12□□□□□ -1.43
COL3A1-205ENST00000470167 TEKT1Q969V4 418 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 IQCGQ9H095 443 aaKnown RBP6.12□□□□□ -1.43
COL3A1-205ENST00000470167 RMI1Q9H9A7 625 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 ETAA1Q9NY74 926 aa6.12□□□□□ -1.43
COL3A1-205ENST00000470167 MKRN1Q9UHC7 482 aaKnown RBP6.12□□□□□ -1.43
COL3A1-205ENST00000470167 NOVA2Q9UNW9 492 aaKnown RBP6.12□□□□□ -1.43
COL3A1-205ENST00000470167 CECR2Q9BXF3 1484 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 KINO60870 393 aaKnown RBP6.11□□□□□ -1.43
COL3A1-205ENST00000470167 GIGYF1O75420 1035 aaPredicted RBP6.11□□□□□ -1.43
COL3A1-205ENST00000470167 TNNT3P45378 269 aaPredicted RBP6.11□□□□□ -1.43
COL3A1-205ENST00000470167 TSGA10IPQ3SY00 556 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 CRTC2Q53ET0 693 aaPredicted RBP6.11□□□□□ -1.43
COL3A1-205ENST00000470167 ZNF394Q53GI3 561 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 TMEM164Q5U3C3 297 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 TRAF7Q6Q0C0 670 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 TRIM74Q86UV6 250 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 TRIM73Q86UV7 250 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 BPHLQ86WA6 291 aaPredicted RBP6.11□□□□□ -1.43
COL3A1-205ENST00000470167 TDRD7Q8NHU6 1098 aaKnown RBP6.11□□□□□ -1.43
COL3A1-205ENST00000470167 FBXO41Q8TF61 875 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 BHMTQ93088 406 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 CCDC47Q96A33 483 aaKnown RBP6.11□□□□□ -1.43
COL3A1-205ENST00000470167 FMNL2Q96PY5 1086 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 TACO1Q9BSH4 297 aaKnown RBP6.11□□□□□ -1.43
COL3A1-205ENST00000470167 PAGR1Q9BTK6 254 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 RWDD1Q9H446 243 aaPredicted RBP6.11□□□□□ -1.43
COL3A1-205ENST00000470167 VEZTQ9HBM0 779 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 TRPV5Q9NQA5 729 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 AKAP2Q9Y2D5 859 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 SCINQ9Y6U3 715 aa6.11□□□□□ -1.43
COL3A1-205ENST00000470167 KANK1Q14678 1352 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 FAM196BA6NMK8 535 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 HSP90AB1P08238 724 aaKnown RBP6.1□□□□□ -1.43
COL3A1-205ENST00000470167 CCDC175P0C221 793 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 IMPDH2P12268 514 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 RASSF7Q02833 373 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 ADCY2Q08462 1091 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 DCTN1Q14203 1278 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 ELOAQ14241 798 aaKnown RBP6.1□□□□□ -1.43
COL3A1-205ENST00000470167 CCDC70Q6NSX1 233 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 RBM12BQ8IXT5 1001 aaKnown RBP6.1□□□□□ -1.43
COL3A1-205ENST00000470167 ELOA2Q8IYF1 753 aaPredicted RBP6.1□□□□□ -1.43
COL3A1-205ENST00000470167 LARGE2Q8N3Y3 721 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 PHC3Q8NDX5 983 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 SLC10A4Q96EP9 437 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 CEP63Q96MT8 703 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 KIF2CQ99661 725 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 DEF6Q9H4E7 631 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 CHPF2Q9P2E5 772 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 CHIC2Q9UKJ5 165 aa6.1□□□□□ -1.43
COL3A1-205ENST00000470167 NISCHQ9Y2I1 1504 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 DISP3Q9P2K9 1392 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 SBNO2Q9Y2G9 1366 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 ERBB4Q15303 1308 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 RNF223E7ERA6 249 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 CAND2O75155 1236 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 ECEL1O95672 775 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 CCDC159P0C7I6 412 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 U2AF1L5P0DN76 240 aaPredicted RBP6.09□□□□□ -1.43
COL3A1-205ENST00000470167 XRCC6P12956 609 aaKnown RBP eCLIP6.09□□□□□ -1.43
COL3A1-205ENST00000470167 RASA1P20936 1047 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 ATICP31939 592 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 STIP1P31948 543 aaKnown RBP6.09□□□□□ -1.43
COL3A1-205ENST00000470167 ZNF132P52740 706 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 SH3BP2P78314 561 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 U2AF1Q01081 240 aaKnown RBP eCLIP6.09□□□□□ -1.43
COL3A1-205ENST00000470167 XPCQ01831 940 aaPredicted RBP6.09□□□□□ -1.43
COL3A1-205ENST00000470167 KCNC4Q03721 635 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 TMED1Q13445 227 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 E2F5Q15329 346 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 EML3Q32P44 896 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 OXLD1Q5BKU9 147 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 PLA2G2CQ5R387 149 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 IQCEQ6IPM2 695 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 NFXL1Q6ZNB6 911 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 ZNF771Q7L3S4 317 aaPredicted RBP6.09□□□□□ -1.43
COL3A1-205ENST00000470167 TTC30AQ86WT1 665 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 NCAPG2Q86XI2 1143 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 STAG2Q8N3U4 1231 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 PDILTQ8N807 584 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 GIMAP1Q8WWP7 306 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 RMDN2Q96LZ7 410 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 FEZ1Q99689 392 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 C1QTNF2Q9BXJ5 285 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 HOXC10Q9NYD6 342 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 GABBR1Q9UBS5 961 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 BLOC1S6Q9UL45 172 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 DOLKQ9UPQ8 538 aa6.09□□□□□ -1.43
COL3A1-205ENST00000470167 UQCRHLA0A096LP55 91 aa6.08□□□□□ -1.44
COL3A1-205ENST00000470167 ATP5J2-PTCD1G3V325 749 aa6.08□□□□□ -1.44
COL3A1-205ENST00000470167 MTA2O94776 668 aa6.08□□□□□ -1.44
COL3A1-205ENST00000470167 ITGBL1O95965 494 aaPredicted RBP6.08□□□□□ -1.44
COL3A1-205ENST00000470167 UQCRHP07919 91 aa6.08□□□□□ -1.44
COL3A1-205ENST00000470167 RPL17P18621 184 aaKnown RBP6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms