RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 NPHP4O75161 1426 aaPredicted RBP14.34□□□□□ -0.11
VARS2-205ENST00000469358 ALDH1L1O75891 902 aa14.33□□□□□ -0.12
VARS2-205ENST00000469358 ARID5BQ14865 1188 aa14.33□□□□□ -0.12
VARS2-205ENST00000469358 ERC1Q8IUD2 1116 aa14.33□□□□□ -0.12
VARS2-205ENST00000469358 TRIM5Q9C035 493 aa14.33□□□□□ -0.12
VARS2-205ENST00000469358 HSP90B1P14625 803 aaKnown RBP14.33□□□□□ -0.12
VARS2-205ENST00000469358 LINS1Q8NG48 757 aa14.33□□□□□ -0.12
VARS2-205ENST00000469358 BRF1Q92994 677 aa14.33□□□□□ -0.12
VARS2-205ENST00000469358 ORAI2Q96SN7 254 aa14.33□□□□□ -0.12
VARS2-205ENST00000469358 MYD88Q99836 296 aa14.33□□□□□ -0.12
VARS2-205ENST00000469358 CCDC94Q9BW85 323 aaPredicted RBP14.33□□□□□ -0.12
VARS2-205ENST00000469358 HOXB7P09629 217 aa14.32□□□□□ -0.12
VARS2-205ENST00000469358 HMGN5P82970 282 aaKnown RBP14.32□□□□□ -0.12
VARS2-205ENST00000469358 PDIA6Q15084 440 aa14.32□□□□□ -0.12
VARS2-205ENST00000469358 DDX46Q7L014 1031 aaKnown RBP14.32□□□□□ -0.12
VARS2-205ENST00000469358 MARF1Q9Y4F3 1742 aaKnown RBP14.32□□□□□ -0.12
VARS2-205ENST00000469358 CACNA1FO60840 1977 aa14.32□□□□□ -0.12
VARS2-205ENST00000469358 ATP5J2-PTCD1G3V325 749 aa14.32□□□□□ -0.12
VARS2-205ENST00000469358 IGSF3O75054 1194 aa14.32□□□□□ -0.12
VARS2-205ENST00000469358 PTCD1O75127 700 aaKnown RBP14.32□□□□□ -0.12
VARS2-205ENST00000469358 TAF5LO75529 589 aa14.32□□□□□ -0.12
VARS2-205ENST00000469358 DBNLQ9UJU6 430 aaKnown RBP14.32□□□□□ -0.12
VARS2-205ENST00000469358 PSMA5P28066 241 aa14.32□□□□□ -0.12
VARS2-205ENST00000469358 XAGE3Q8WTP9 111 aa14.32□□□□□ -0.12
VARS2-205ENST00000469358 NAP1L2Q9ULW6 460 aaPredicted RBP14.32□□□□□ -0.12
VARS2-205ENST00000469358 USP16Q9Y5T5 823 aa14.32□□□□□ -0.12
VARS2-205ENST00000469358 RGPD2P0DJD1 1756 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 GUCY1B3Q02153 619 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 TFCP2Q12800 502 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 COPS6Q7L5N1 327 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 CCDC144BQ3MJ40 725 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 Q6ZUG5 572 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 CHST3Q7LGC8 479 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 CCDC144CPQ8IYA2 1237 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 ANKRD24Q8TF21 1146 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 TAOK2Q9UL54 1235 aa14.31□□□□□ -0.12
VARS2-205ENST00000469358 U2AF2P26368 475 aaKnown RBP eCLIP14.31□□□□□ -0.121e-7■□□□□ 8
VARS2-205ENST00000469358 THEMISQ8N1K5 641 aaPredicted RBP14.31□□□□□ -0.12
VARS2-205ENST00000469358 GCP02774 474 aa14.3□□□□□ -0.12
VARS2-205ENST00000469358 DBNDD2Q9BQY9 259 aa14.3□□□□□ -0.12
VARS2-205ENST00000469358 ZNF165P49910 485 aa14.3□□□□□ -0.12
VARS2-205ENST00000469358 ZC3H6P61129 1189 aaKnown RBP14.3□□□□□ -0.12
VARS2-205ENST00000469358 CCT2P78371 535 aaKnown RBP14.3□□□□□ -0.12
VARS2-205ENST00000469358 RNF20Q5VTR2 975 aa14.3□□□□□ -0.12
VARS2-205ENST00000469358 NCOA5Q9HCD5 579 aaKnown RBP14.29□□□□□ -0.12
VARS2-205ENST00000469358 H3BQV1 296 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 CYP21A2P08686 494 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 GTF2F1P35269 517 aaKnown RBP eCLIP14.29□□□□□ -0.12
VARS2-205ENST00000469358 FGD1P98174 961 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 IFFO2Q5TF58 517 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 UBE3BQ7Z3V4 1068 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 MED23Q9ULK4 1368 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 NEURL1BA8MQ27 555 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 STOX1Q6ZVD7 989 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 NFATC2IPQ8NCF5 419 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 CACTINQ8WUQ7 758 aaKnown RBP14.29□□□□□ -0.12
VARS2-205ENST00000469358 ZNF592Q92610 1267 aa14.29□□□□□ -0.12
VARS2-205ENST00000469358 DDX21Q9NR30 783 aaKnown RBP eCLIP14.29□□□□□ -0.12
VARS2-205ENST00000469358 N4BP2Q86UW6 1770 aaPredicted RBP14.28□□□□□ -0.12
VARS2-205ENST00000469358 PDCP20941 246 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 ZNF75DP51815 510 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 C11orf57Q6ZUT1 292 aaPredicted RBP14.28□□□□□ -0.12
VARS2-205ENST00000469358 MTERF4Q7Z6M4 381 aaKnown RBP14.28□□□□□ -0.12
VARS2-205ENST00000469358 NEK1Q96PY6 1258 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 CLSTN2Q9H4D0 955 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 CRYBG1Q9Y4K1 1723 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 SCRN1Q12765 414 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 GCKRQ14397 625 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 SCAND2PQ9GZW5 306 aaPredicted RBP14.28□□□□□ -0.12
VARS2-205ENST00000469358 LTN1O94822 1766 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 GOLGA6L6A8MZA4 724 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 ZSCAN25Q6NSZ9 544 aa14.28□□□□□ -0.12
VARS2-205ENST00000469358 RESTQ13127 1097 aa14.27□□□□□ -0.12
VARS2-205ENST00000469358 PDCL2Q8N4E4 241 aa14.27□□□□□ -0.12
VARS2-205ENST00000469358 GTF3C6Q969F1 213 aa14.27□□□□□ -0.12
VARS2-205ENST00000469358 NPHP3Q7Z494 1330 aa14.27□□□□□ -0.12
VARS2-205ENST00000469358 DDX58O95786 925 aaKnown RBP14.27□□□□□ -0.13
VARS2-205ENST00000469358 APOBRQ0VD83 1088 aa14.27□□□□□ -0.13
VARS2-205ENST00000469358 ELP1O95163 1332 aa14.27□□□□□ -0.13
VARS2-205ENST00000469358 MED1Q15648 1581 aaPredicted RBP14.27□□□□□ -0.13
VARS2-205ENST00000469358 USP27XA6NNY8 438 aa14.27□□□□□ -0.13
VARS2-205ENST00000469358 HIP1O00291 1037 aa14.27□□□□□ -0.13
VARS2-205ENST00000469358 CHAF1AQ13111 956 aaPredicted RBP14.27□□□□□ -0.13
VARS2-205ENST00000469358 ZNF496Q96IT1 587 aaPredicted RBP14.27□□□□□ -0.13
VARS2-205ENST00000469358 CLIP2Q9UDT6 1046 aa14.27□□□□□ -0.13
VARS2-205ENST00000469358 ZNF609O15014 1411 aa14.26□□□□□ -0.13
VARS2-205ENST00000469358 ANKRD1Q15327 319 aa14.26□□□□□ -0.13
VARS2-205ENST00000469358 TNNI3KQ59H18 835 aa14.26□□□□□ -0.13
VARS2-205ENST00000469358 RAB11FIP4Q86YS3 637 aa14.26□□□□□ -0.13
VARS2-205ENST00000469358 GOLPH3LQ9H4A5 285 aa14.26□□□□□ -0.13
VARS2-205ENST00000469358 FPGT-TNNI3KV9GXZ4 949 aa14.26□□□□□ -0.13
VARS2-205ENST00000469358 ZSCAN20P17040 1043 aaPredicted RBP14.26□□□□□ -0.13
VARS2-205ENST00000469358 ZNF790Q6PG37 636 aa14.26□□□□□ -0.13
VARS2-205ENST00000469358 ARHGEF25Q86VW2 580 aa14.26□□□□□ -0.13
VARS2-205ENST00000469358 GPHNQ9NQX3 736 aaPredicted RBP14.26□□□□□ -0.13
VARS2-205ENST00000469358 ANKARQ7Z5J8 1434 aa14.26□□□□□ -0.13
VARS2-205ENST00000469358 PTPN12Q05209 780 aaKnown RBP14.25□□□□□ -0.13
VARS2-205ENST00000469358 AMOTQ4VCS5 1084 aa14.25□□□□□ -0.13
VARS2-205ENST00000469358 OTUD7BQ6GQQ9 843 aa14.25□□□□□ -0.13
VARS2-205ENST00000469358 NEUROD6Q96NK8 337 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms