RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 CALRP27797 417 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 PRKAR2BP31323 418 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 TDO2P48775 406 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 HSP90AB3PQ58FF7 597 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 HOMER1Q86YM7 354 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 CCDC83Q8IWF9 413 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 LEO1Q8WVC0 666 aaPredicted RBP10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 RILPL2Q969X0 211 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 NAT10Q9H0A0 1025 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 HYPKQ9NX55 129 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 CAMSAP1Q5T5Y3 1602 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 SGSM2O43147 1006 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 TUBB4BP68371 445 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 SART3Q15020 963 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 RSRC2Q7L4I2 434 aaKnown RBP10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 ERC1Q8IUD2 1116 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 CEP57L1Q8IYX8 460 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 BICD2Q8TD16 824 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 CCDC34Q96HJ3 373 aa10.51□□□□□ -0.73
SMARCE1-207ENST00000469334 CD163L1Q9NR16 1453 aa10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 UGGT1Q9NYU2 1555 aa10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 GOLGA6L9A6NEM1 432 aa10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 GNAI3P08754 354 aa10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 LARP1BQ659C4 914 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 C11orf57Q6ZUT1 292 aaPredicted RBP10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 C8orf58Q8NAV2 365 aa10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 CARD6Q9BX69 1037 aa10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 C14orf93Q9H972 538 aaKnown RBP10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 RAI14Q9P0K7 980 aa10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 PARP3Q9Y6F1 533 aa10.5□□□□□ -0.73
SMARCE1-207ENST00000469334 H3BQF6 201 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 PPFIA4O75335 1185 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 NR1I2O75469 434 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 URI1O94763 535 aaPredicted RBP10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 APOBRQ0VD83 1088 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 LONRF2Q1L5Z9 754 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 NBPF20Q3BBV1 942 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 NBPF11Q86T75 865 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 DHX40Q8IX18 779 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 DNAAF4Q8WXU2 420 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 GOLGA1Q92805 767 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 MEIS3Q99687 375 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 LSG1Q9H089 658 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 RBM28Q9NW13 759 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 MROH1Q8NDA8 1641 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 ZSCAN12O43309 604 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 LARGE1O95461 756 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 GRIPAP1Q4V328 841 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 GORABQ5T7V8 394 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 TRIM65Q6PJ69 517 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 HDXQ7Z353 690 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 EGFL6Q8IUX8 553 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 STAG1Q8WVM7 1258 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 ACBD3Q9H3P7 528 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 A1CFQ9NQ94 594 aaKnown RBP10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 PDRG1Q9NUG6 133 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 TRAK1Q9UPV9 953 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 CHMP3Q9Y3E7 222 aa10.49□□□□□ -0.73
SMARCE1-207ENST00000469334 KIF3CO14782 793 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 ERLIN1O75477 346 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 TXLNAP40222 546 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 CCT4P50991 539 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 DNAJC21Q5F1R6 531 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 FAM71BQ8TC56 605 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 KCNB2Q92953 911 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 JPH4Q96JJ6 628 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 PRAM1Q96QH2 718 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 BPIFA3Q9BQP9 254 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 VPS18Q9P253 973 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 ARHGEF10O15013 1369 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 MAP2P11137 1827 aaKnown RBP10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 ABCC3O15438 1527 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 USP5P45974 858 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 MAP3K9P80192 1104 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 PPP2R3AQ06190 1150 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 ARMCX5Q6P1M9 558 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 CDC37L1Q7L3B6 337 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 PARD6BQ9BYG5 372 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 ZSWIM6Q9HCJ5 1215 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 CYP46A1Q9Y6A2 500 aa10.48□□□□□ -0.73
SMARCE1-207ENST00000469334 LMTK2Q8IWU2 1503 aa10.47□□□□□ -0.73
SMARCE1-207ENST00000469334 ELL2O00472 640 aaPredicted RBP10.47□□□□□ -0.73
SMARCE1-207ENST00000469334 C21orf2O43822 256 aa10.47□□□□□ -0.73
SMARCE1-207ENST00000469334 E2F4Q16254 413 aa10.47□□□□□ -0.73
SMARCE1-207ENST00000469334 MRFAP1Q9Y605 127 aa10.47□□□□□ -0.73
SMARCE1-207ENST00000469334 NEXMIFQ5QGS0 1516 aa10.47□□□□□ -0.73
SMARCE1-207ENST00000469334 CACNA1FO60840 1977 aa10.47□□□□□ -0.73
SMARCE1-207ENST00000469334 PPP1R12AO14974 1030 aaPredicted RBP10.46□□□□□ -0.73
SMARCE1-207ENST00000469334 GNAI2P04899 355 aa10.46□□□□□ -0.73
SMARCE1-207ENST00000469334 TUBBP07437 444 aa10.46□□□□□ -0.73
SMARCE1-207ENST00000469334 CCDC30Q5VVM6 783 aa10.46□□□□□ -0.73
SMARCE1-207ENST00000469334 LRRC31Q6UY01 552 aa10.46□□□□□ -0.73
SMARCE1-207ENST00000469334 PGBD1Q96JS3 809 aa10.46□□□□□ -0.73
SMARCE1-207ENST00000469334 GBP3Q9H0R5 595 aa10.46□□□□□ -0.73
SMARCE1-207ENST00000469334 TERF2IPQ9NYB0 399 aa10.46□□□□□ -0.73
SMARCE1-207ENST00000469334 CFAP45Q9UL16 551 aa10.46□□□□□ -0.73
SMARCE1-207ENST00000469334 ARAP3Q8WWN8 1544 aa10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 SETQ01105 290 aaPredicted RBP10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 ST3GAL1Q11201 340 aa10.46□□□□□ -0.74
SMARCE1-207ENST00000469334 GNL2Q13823 731 aaKnown RBP10.46□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms