RNA–Protein interactions for RNA: ENST00000469275.5

PRKD3-207, Transcript of protein kinase D3, humanhuman

TSL 2

Gene PRKD3, Length 2,642 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-207ENST00000469275 NECAB1Q8N987 351 aa7.21□□□□□ -1.26
PRKD3-207ENST00000469275 RUFY2Q8WXA3 655 aa7.21□□□□□ -1.26
PRKD3-207ENST00000469275 NSFL1CQ9UNZ2 370 aaKnown RBP7.21□□□□□ -1.26
PRKD3-207ENST00000469275 ZBTB1Q9Y2K1 713 aa7.21□□□□□ -1.26
PRKD3-207ENST00000469275 USP42Q9H9J4 1324 aaKnown RBP7.21□□□□□ -1.26
PRKD3-207ENST00000469275 EP400Q96L91 3159 aa7.21□□□□□ -1.26
PRKD3-207ENST00000469275 KCPQ6ZWJ8 1503 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 GLI3P10071 1580 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 H7C1W4 665 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 GOLIM4O00461 696 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 EXOC5O00471 708 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 PPFIA3O75145 1194 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 STK3Q13188 491 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 NKX1-1Q15270 411 aaPredicted RBP7.2□□□□□ -1.26
PRKD3-207ENST00000469275 RABL6Q3YEC7 729 aaPredicted RBP7.2□□□□□ -1.26
PRKD3-207ENST00000469275 CCDC171Q6TFL3 1326 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 PARP4Q9UKK3 1724 aaKnown RBP7.2□□□□□ -1.26
PRKD3-207ENST00000469275 CYP2E1P05181 493 aaPredicted RBP7.2□□□□□ -1.26
PRKD3-207ENST00000469275 FKBP4Q02790 459 aaKnown RBP eCLIP7.2□□□□□ -1.26
PRKD3-207ENST00000469275 CREB3L3Q68CJ9 461 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 SMIM5Q71RC9 77 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 ATG9AQ7Z3C6 839 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 LRRC2Q9BYS8 371 aa7.2□□□□□ -1.26
PRKD3-207ENST00000469275 ABCA3Q99758 1704 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 A0A0G2JLW4 131 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 TAF7LQ5H9L4 462 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 PI16Q6UXB8 463 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 KIF6Q6ZMV9 814 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 CWC22Q9HCG8 908 aaKnown RBP7.19□□□□□ -1.26
PRKD3-207ENST00000469275 PDRG1Q9NUG6 133 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 TOGARAM1Q9Y4F4 1720 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 A0A1B0GUL7 405 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 ZKSCAN1P17029 563 aaPredicted RBP7.19□□□□□ -1.26
PRKD3-207ENST00000469275 ADORA1P30542 326 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 MKRN4PQ13434 485 aaPredicted RBP7.19□□□□□ -1.26
PRKD3-207ENST00000469275 CCDC57Q2TAC2 916 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 VPS53Q5VIR6 699 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 CCDC191Q8NCU4 936 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 TTC14Q96N46 770 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 LMBRD1Q9NUN5 540 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 COL15A1P39059 1388 aa7.19□□□□□ -1.26
PRKD3-207ENST00000469275 SLC27A2O14975 620 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 STARD3NLO95772 234 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 TCIRG1Q13488 830 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 NECTIN1Q15223 517 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 SHANK3Q9BYB0 1731 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 ROBO1Q9Y6N7 1651 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 SNAP23O00161 211 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 MCM2P49736 904 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 CUL4AQ13619 759 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 ME3Q16798 604 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 FAM182BQ5T319 152 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 GORABQ5T7V8 394 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 HELBQ8NG08 1087 aaPredicted RBP7.18□□□□□ -1.26
PRKD3-207ENST00000469275 GPT2Q8TD30 523 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 GRPEL1Q9HAV7 217 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 TAOK2Q9UL54 1235 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 LIMCH1Q9UPQ0 1083 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 CYP46A1Q9Y6A2 500 aa7.18□□□□□ -1.26
PRKD3-207ENST00000469275 EYA2O00167 538 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 KCNQ2O43526 872 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 IFIT1P09914 478 aaKnown RBP7.17□□□□□ -1.26
PRKD3-207ENST00000469275 ATP5JP18859 108 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 L1TD1Q5T7N2 865 aaKnown RBP7.17□□□□□ -1.26
PRKD3-207ENST00000469275 MAP4K1Q92918 833 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 GREM2Q9H772 168 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 TRMT112Q9UI30 125 aaKnown RBP7.17□□□□□ -1.26
PRKD3-207ENST00000469275 ZNF609O15014 1411 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 FSD2A1L4K1 749 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 VPS37CA5D8V6 355 aaPredicted RBP7.17□□□□□ -1.26
PRKD3-207ENST00000469275 TAF5LO75529 589 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 BRD1O95696 1058 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 FOSBP53539 338 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 SCARF1Q14162 830 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 DDB1Q16531 1140 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 CHST3Q7LGC8 479 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 FERMT3Q86UX7 667 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 ISCA1Q9BUE6 129 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 PAG1Q9NWQ8 432 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 TPCN1Q9ULQ1 816 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 NAP1L2Q9ULW6 460 aaPredicted RBP7.17□□□□□ -1.26
PRKD3-207ENST00000469275 SMC3Q9UQE7 1217 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 LAMB4A4D0S4 1761 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 PHLPP1O60346 1717 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 ERBB4Q15303 1308 aa7.17□□□□□ -1.26
PRKD3-207ENST00000469275 GADD45BO75293 160 aaPredicted RBP7.16□□□□□ -1.26
PRKD3-207ENST00000469275 CYP19A1P11511 503 aaPredicted RBP7.16□□□□□ -1.26
PRKD3-207ENST00000469275 HCLS1P14317 486 aaPredicted RBP7.16□□□□□ -1.26
PRKD3-207ENST00000469275 GJB2P29033 226 aa7.16□□□□□ -1.26
PRKD3-207ENST00000469275 ATP6V1AP38606 617 aa7.16□□□□□ -1.26
PRKD3-207ENST00000469275 ST3GAL1Q11201 340 aa7.16□□□□□ -1.26
PRKD3-207ENST00000469275 IFIT5Q13325 482 aaKnown RBP7.16□□□□□ -1.26
PRKD3-207ENST00000469275 KLHL40Q2TBA0 621 aa7.16□□□□□ -1.26
PRKD3-207ENST00000469275 FAM173BQ6P4H8 233 aa7.16□□□□□ -1.26
PRKD3-207ENST00000469275 BLOC1S2Q6QNY1 142 aa7.16□□□□□ -1.26
PRKD3-207ENST00000469275 DZIP3Q86Y13 1208 aaKnown RBP7.16□□□□□ -1.26
PRKD3-207ENST00000469275 CEP126Q9P2H0 1117 aa7.16□□□□□ -1.26
PRKD3-207ENST00000469275 TNS2Q63HR2 1409 aa7.16□□□□□ -1.26
PRKD3-207ENST00000469275 TCHHQ07283 1943 aa7.16□□□□□ -1.26
PRKD3-207ENST00000469275 MAP3K15Q6ZN16 1313 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms