RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 BRMS1Q9HCU9 246 aa5.92□□□□□ -1.46
SF3B1-207ENST00000468925 CFAP65Q6ZU64 1925 aaKnown RBP5.91□□□□□ -1.46
SF3B1-207ENST00000468925 CASKIN1Q8WXD9 1431 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 ARHGEF11O15085 1522 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 CLASP1Q7Z460 1538 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 MYCP01106 439 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-207ENST00000468925 CALRP27797 417 aaKnown RBP5.91□□□□□ -1.46
SF3B1-207ENST00000468925 GPC1P35052 558 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 ABL2P42684 1182 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 VAC14Q08AM6 782 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 RAB3GAP1Q15042 981 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 UVSSAQ2YD98 709 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 FOXR1Q6PIV2 292 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 ZNF771Q7L3S4 317 aaPredicted RBP5.91□□□□□ -1.46
SF3B1-207ENST00000468925 TAS1R3Q7RTX0 852 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 CCDC125Q86Z20 511 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 FAM184AQ8NB25 1140 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 IGSF5Q9NSI5 407 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 CEP126Q9P2H0 1117 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 DYRK1BQ9Y463 629 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 KIF16BQ96L93 1317 aa5.91□□□□□ -1.46
SF3B1-207ENST00000468925 NLRP1Q9C000 1473 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 UNCXA6NJT0 531 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 TULP2O00295 520 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 BRD1O95696 1058 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 APPP05067 770 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 NUCB2P80303 420 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 CENPCQ03188 943 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 CAVIN1Q6NZI2 390 aaKnown RBP5.9□□□□□ -1.46
SF3B1-207ENST00000468925 NEDD1Q8NHV4 660 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 ZNF830Q96NB3 372 aaPredicted RBP5.9□□□□□ -1.46
SF3B1-207ENST00000468925 TRERF1Q96PN7 1200 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 POLR3GLQ9BT43 218 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 NUCKS1Q9H1E3 243 aaKnown RBP5.9□□□□□ -1.46
SF3B1-207ENST00000468925 MBIPQ9NS73 344 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 DOLKQ9UPQ8 538 aa5.9□□□□□ -1.46
SF3B1-207ENST00000468925 KIF21AQ7Z4S6 1674 aa5.9□□□□□ -1.47
SF3B1-207ENST00000468925 RAD50Q92878 1312 aa5.9□□□□□ -1.47
SF3B1-207ENST00000468925 PARD3Q8TEW0 1356 aa5.9□□□□□ -1.47
SF3B1-207ENST00000468925 NPC1L1Q9UHC9 1359 aa5.9□□□□□ -1.47
SF3B1-207ENST00000468925 GAPVD1Q14C86 1478 aa5.9□□□□□ -1.47
SF3B1-207ENST00000468925 GOLGA6L6A8MZA4 724 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 H7C1W4 665 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 FURINP09958 794 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 MX2P20592 715 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 MCCP23508 829 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 DDIT3P35638 169 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 MCCD1P59942 119 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-207ENST00000468925 CC2D1BQ5T0F9 858 aaKnown RBP5.89□□□□□ -1.47
SF3B1-207ENST00000468925 LCE1DQ5T752 114 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 TMEM214Q6NUQ4 689 aaKnown RBP5.89□□□□□ -1.47
SF3B1-207ENST00000468925 RPAINQ86UA6 219 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 RNF135Q8IUD6 432 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 GOLGA6L1Q8N7Z2 621 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 SYAP1Q96A49 352 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-207ENST00000468925 ZSCAN10Q96SZ4 725 aaPredicted RBP5.89□□□□□ -1.47
SF3B1-207ENST00000468925 RUBCNLQ9H714 662 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 GDPD2Q9HCC8 539 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 CGNQ9P2M7 1197 aaKnown RBP5.89□□□□□ -1.47
SF3B1-207ENST00000468925 FHOD3Q2V2M9 1422 aa5.89□□□□□ -1.47
SF3B1-207ENST00000468925 MBD3O95983 291 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 GNRH1P01148 92 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 F11P03951 625 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 TNNT3P45378 269 aaPredicted RBP5.88□□□□□ -1.47
SF3B1-207ENST00000468925 SLFNL1Q499Z3 407 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 MNS1Q8NEH6 495 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 PIBF1Q8WXW3 757 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 ANKRD7Q92527 254 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 SECISBP2LQ93073 1101 aaKnown RBP5.88□□□□□ -1.47
SF3B1-207ENST00000468925 L3MBTL2Q969R5 705 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 ACDQ96AP0 544 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 ESYT1Q9BSJ8 1104 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 C22orf23Q9BZE7 217 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 RWDD1Q9H446 243 aaPredicted RBP5.88□□□□□ -1.47
SF3B1-207ENST00000468925 CWC22Q9HCG8 908 aaKnown RBP5.88□□□□□ -1.47
SF3B1-207ENST00000468925 RBM28Q9NW13 759 aaKnown RBP5.88□□□□□ -1.47
SF3B1-207ENST00000468925 HDAC5Q9UQL6 1122 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 COG6Q9Y2V7 657 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 CNTNAP5Q8WYK1 1306 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 ROCK1Q13464 1354 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 ATAD2Q6PL18 1390 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 PLEKHH1Q9ULM0 1364 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 UHRF1BP1Q6BDS2 1440 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 TCOF1Q13428 1488 aaKnown RBP5.88□□□□□ -1.47
SF3B1-207ENST00000468925 TEX14Q8IWB6 1497 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 KIF14Q15058 1648 aa5.88□□□□□ -1.47
SF3B1-207ENST00000468925 SPATA31C2B4DYI2 1134 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 THBS1P07996 1170 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 ITGB7P26010 798 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 KCNJ4P48050 445 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 CBX1P83916 185 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 TLR1Q15399 786 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 C4orf17Q53FE4 359 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 GNASQ5JWF2 1037 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 SND1Q7KZF4 910 aaKnown RBP eCLIP5.87□□□□□ -1.475e-6■■■■□ 23
SF3B1-207ENST00000468925 ZNF592Q92610 1267 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 ETNK1Q9HBU6 452 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 SPTLC3Q9NUV7 552 aa5.87□□□□□ -1.47
SF3B1-207ENST00000468925 CWC15Q9P013 229 aaKnown RBP5.87□□□□□ -1.47
SF3B1-207ENST00000468925 DDX49Q9Y6V7 483 aaKnown RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms