RNA–Protein interactions for RNA: ENST00000468876.1

ARHGEF39-202, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 739 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-202ENST00000468876 TMX4Q9H1E5 349 aaPredicted RBP15.53■□□□□ 0.08
ARHGEF39-202ENST00000468876 DLG5Q8TDM6 1919 aa15.53■□□□□ 0.08
ARHGEF39-202ENST00000468876 LAMB4A4D0S4 1761 aa15.52■□□□□ 0.08
ARHGEF39-202ENST00000468876 BTBD11A6QL63 1104 aa15.52■□□□□ 0.08
ARHGEF39-202ENST00000468876 CLEC4GQ6UXB4 293 aa15.52■□□□□ 0.08
ARHGEF39-202ENST00000468876 MICALL2Q8IY33 904 aa15.52■□□□□ 0.08
ARHGEF39-202ENST00000468876 OTUD5Q96G74 571 aa15.52■□□□□ 0.08
ARHGEF39-202ENST00000468876 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
ARHGEF39-202ENST00000468876 KDM3BQ7LBC6 1761 aa15.52■□□□□ 0.07
ARHGEF39-202ENST00000468876 PPEF1O14829 653 aaPredicted RBP15.51■□□□□ 0.07
ARHGEF39-202ENST00000468876 SAMD7Q7Z3H4 446 aa15.51■□□□□ 0.07
ARHGEF39-202ENST00000468876 SLC51AQ86UW1 340 aa15.51■□□□□ 0.07
ARHGEF39-202ENST00000468876 FMNL2Q96PY5 1086 aa15.51■□□□□ 0.07
ARHGEF39-202ENST00000468876 TRIM17Q9Y577 477 aa15.51■□□□□ 0.07
ARHGEF39-202ENST00000468876 TBC1D10BQ4KMP7 808 aaPredicted RBP15.5■□□□□ 0.07
ARHGEF39-202ENST00000468876 MKI67P46013 3256 aaKnown RBP15.5■□□□□ 0.07
ARHGEF39-202ENST00000468876 NOM1Q5C9Z4 860 aaKnown RBP15.49■□□□□ 0.07
ARHGEF39-202ENST00000468876 RBM26Q5T8P6 1007 aaKnown RBP15.49■□□□□ 0.07
ARHGEF39-202ENST00000468876 TMEM106CQ9BVX2 250 aa15.49■□□□□ 0.07
ARHGEF39-202ENST00000468876 RBM27Q9P2N5 1060 aaKnown RBP15.49■□□□□ 0.07
ARHGEF39-202ENST00000468876 SULF1Q8IWU6 871 aa15.48■□□□□ 0.07
ARHGEF39-202ENST00000468876 SUPT20HQ8NEM7 779 aa15.48■□□□□ 0.07
ARHGEF39-202ENST00000468876 VPS33BQ9H267 617 aa15.48■□□□□ 0.07
ARHGEF39-202ENST00000468876 USP16Q9Y5T5 823 aa15.48■□□□□ 0.07
ARHGEF39-202ENST00000468876 PAPPA2Q9BXP8 1791 aa15.48■□□□□ 0.07
ARHGEF39-202ENST00000468876 SZT2Q5T011 3432 aa15.47■□□□□ 0.07
ARHGEF39-202ENST00000468876 CRY2Q49AN0 593 aa15.47■□□□□ 0.07
ARHGEF39-202ENST00000468876 RBM17Q96I25 401 aaKnown RBP15.47■□□□□ 0.07
ARHGEF39-202ENST00000468876 THUMPD2Q9BTF0 503 aaKnown RBP15.47■□□□□ 0.07
ARHGEF39-202ENST00000468876 NUTM1Q86Y26 1132 aa15.46■□□□□ 0.07
ARHGEF39-202ENST00000468876 RTF1Q92541 710 aaKnown RBP15.46■□□□□ 0.07
ARHGEF39-202ENST00000468876 CDCA5Q96FF9 252 aa15.46■□□□□ 0.07
ARHGEF39-202ENST00000468876 PLEKHF1Q96S99 279 aa15.46■□□□□ 0.07
ARHGEF39-202ENST00000468876 MIS18AQ9NYP9 233 aa15.46■□□□□ 0.07
ARHGEF39-202ENST00000468876 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
ARHGEF39-202ENST00000468876 NBPF26B4DH59 902 aa15.45■□□□□ 0.06
ARHGEF39-202ENST00000468876 MKRN3Q13064 507 aaKnown RBP15.45■□□□□ 0.06
ARHGEF39-202ENST00000468876 NBPF10Q6P3W6 841 aaKnown RBP15.45■□□□□ 0.06
ARHGEF39-202ENST00000468876 OTOP1Q7RTM1 612 aa15.45■□□□□ 0.06
ARHGEF39-202ENST00000468876 A0A0C4DFX4 3053 aa15.45■□□□□ 0.06
ARHGEF39-202ENST00000468876 HOXA10P31260 410 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF39-202ENST00000468876 COL25A1Q9BXS0 654 aaPredicted RBP15.44■□□□□ 0.06
ARHGEF39-202ENST00000468876 R3HDMLQ9H3Y0 253 aa15.44■□□□□ 0.06
ARHGEF39-202ENST00000468876 ABCC12Q96J65 1359 aa15.44■□□□□ 0.06
ARHGEF39-202ENST00000468876 EGFRP00533 1210 aa15.43■□□□□ 0.06
ARHGEF39-202ENST00000468876 CRAMP1Q96RY5 1269 aa15.43■□□□□ 0.06
ARHGEF39-202ENST00000468876 NYXQ9GZU5 481 aa15.43■□□□□ 0.06
ARHGEF39-202ENST00000468876 GGA3Q9NZ52 723 aa15.43■□□□□ 0.06
ARHGEF39-202ENST00000468876 SNRPA1P09661 255 aaKnown RBP15.42■□□□□ 0.06
ARHGEF39-202ENST00000468876 TM4SF4P48230 202 aa15.42■□□□□ 0.06
ARHGEF39-202ENST00000468876 SREBF2Q12772 1141 aa15.42■□□□□ 0.06
ARHGEF39-202ENST00000468876 NFE2L2Q16236 605 aa15.42■□□□□ 0.06
ARHGEF39-202ENST00000468876 DPP8Q6V1X1 898 aaPredicted RBP15.42■□□□□ 0.06
ARHGEF39-202ENST00000468876 DPF2Q92785 391 aa15.42■□□□□ 0.06
ARHGEF39-202ENST00000468876 KIAA0100Q14667 2235 aaKnown RBP15.41■□□□□ 0.06
ARHGEF39-202ENST00000468876 HTATSF1O43719 755 aaKnown RBP15.41■□□□□ 0.06
ARHGEF39-202ENST00000468876 FKBP1BP68106 108 aa15.41■□□□□ 0.06
ARHGEF39-202ENST00000468876 KIAA2012Q0VF49 1180 aa15.41■□□□□ 0.06
ARHGEF39-202ENST00000468876 SLC4A8Q2Y0W8 1093 aa15.41■□□□□ 0.06
ARHGEF39-202ENST00000468876 ARMC5Q96C12 935 aa15.41■□□□□ 0.06
ARHGEF39-202ENST00000468876 PTPN22Q9Y2R2 807 aa15.41■□□□□ 0.06
ARHGEF39-202ENST00000468876 ATP6V0A2Q9Y487 856 aa15.41■□□□□ 0.06
ARHGEF39-202ENST00000468876 RBBP6Q7Z6E9 1792 aaKnown RBP15.4■□□□□ 0.06
ARHGEF39-202ENST00000468876 UBE2Q2LH0YL09 131 aa15.4■□□□□ 0.06
ARHGEF39-202ENST00000468876 TTLL12Q14166 644 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF39-202ENST00000468876 TAF7Q15545 349 aaPredicted RBP15.4■□□□□ 0.06
ARHGEF39-202ENST00000468876 KIF4BQ2VIQ3 1234 aa15.4■□□□□ 0.06
ARHGEF39-202ENST00000468876 MOB2Q70IA6 237 aa15.4■□□□□ 0.06
ARHGEF39-202ENST00000468876 DPF3Q92784 378 aa15.4■□□□□ 0.06
ARHGEF39-202ENST00000468876 YDJCA8MPS7 323 aa15.39■□□□□ 0.05
ARHGEF39-202ENST00000468876 PSMD14O00487 310 aa15.39■□□□□ 0.05
ARHGEF39-202ENST00000468876 HLFQ16534 295 aa15.39■□□□□ 0.05
ARHGEF39-202ENST00000468876 MPNDQ8N594 471 aa15.39■□□□□ 0.05
ARHGEF39-202ENST00000468876 RTFDC1Q9BY42 306 aaPredicted RBP15.39■□□□□ 0.05
ARHGEF39-202ENST00000468876 RIC1Q4ADV7 1423 aa15.39■□□□□ 0.05
ARHGEF39-202ENST00000468876 MAPK8IP3Q9UPT6 1336 aa15.39■□□□□ 0.05
ARHGEF39-202ENST00000468876 ZEB1P37275 1124 aaPredicted RBP15.38■□□□□ 0.05
ARHGEF39-202ENST00000468876 DDX10Q13206 875 aaKnown RBP15.38■□□□□ 0.05
ARHGEF39-202ENST00000468876 CFHR5Q9BXR6 569 aa15.38■□□□□ 0.05
ARHGEF39-202ENST00000468876 ASTN2O75129 1339 aaPredicted RBP15.38■□□□□ 0.05
ARHGEF39-202ENST00000468876 CEP290O15078 2479 aa15.37■□□□□ 0.05
ARHGEF39-202ENST00000468876 POLR2AP24928 1970 aaKnown RBP15.37■□□□□ 0.05
ARHGEF39-202ENST00000468876 MYCP01106 439 aaPredicted RBP15.37■□□□□ 0.05
ARHGEF39-202ENST00000468876 EIF4A1P60842 406 aaKnown RBP15.37■□□□□ 0.05
ARHGEF39-202ENST00000468876 ERO1AQ96HE7 468 aa15.37■□□□□ 0.05
ARHGEF39-202ENST00000468876 LRCH3Q96II8 777 aa15.37■□□□□ 0.05
ARHGEF39-202ENST00000468876 RGL2O15211 777 aa15.36■□□□□ 0.05
ARHGEF39-202ENST00000468876 ALDH1A1P00352 501 aa15.36■□□□□ 0.05
ARHGEF39-202ENST00000468876 CD99L2Q8TCZ2 262 aa15.36■□□□□ 0.05
ARHGEF39-202ENST00000468876 EFCC1Q9HA90 598 aa15.36■□□□□ 0.05
ARHGEF39-202ENST00000468876 COL6A3P12111 3177 aa15.36■□□□□ 0.05
ARHGEF39-202ENST00000468876 SOX1O00570 391 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF39-202ENST00000468876 NEFMP07197 916 aa15.35■□□□□ 0.05
ARHGEF39-202ENST00000468876 RPS12P25398 132 aaKnown RBP15.35■□□□□ 0.05
ARHGEF39-202ENST00000468876 RALBP1Q15311 655 aa15.35■□□□□ 0.05
ARHGEF39-202ENST00000468876 ANGEL2Q5VTE6 544 aaKnown RBP15.35■□□□□ 0.05
ARHGEF39-202ENST00000468876 CCDC146Q8IYE0 955 aa15.35■□□□□ 0.05
ARHGEF39-202ENST00000468876 NGEFQ8N5V2 710 aa15.35■□□□□ 0.05
ARHGEF39-202ENST00000468876 RRP7AQ9Y3A4 280 aaKnown RBP15.35■□□□□ 0.05
ARHGEF39-202ENST00000468876 MYBBP1AQ9BQG0 1328 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms