RNA–Protein interactions for RNA: ENST00000466963.1

CXXC4-202, Transcript of CXXC finger protein 4, humanhuman

TSL 1 (best)

Gene CXXC4, Length 3,130 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC4-202ENST00000466963 LGR6Q9HBX8 967 aa7.57□□□□□ -1.2
CXXC4-202ENST00000466963 SMIM5Q71RC9 77 aa7.57□□□□□ -1.2
CXXC4-202ENST00000466963 MPNDQ8N594 471 aa7.57□□□□□ -1.2
CXXC4-202ENST00000466963 ERO1AQ96HE7 468 aa7.57□□□□□ -1.2
CXXC4-202ENST00000466963 RNF186Q9NXI6 227 aa7.57□□□□□ -1.2
CXXC4-202ENST00000466963 PODXL2Q9NZ53 605 aa7.57□□□□□ -1.2
CXXC4-202ENST00000466963 MANSC4A6NHS7 340 aaPredicted RBP7.56□□□□□ -1.2
CXXC4-202ENST00000466963 PAXIP1Q6ZW49 1069 aaPredicted RBP7.56□□□□□ -1.2
CXXC4-202ENST00000466963 FKTNO75072 461 aa7.56□□□□□ -1.2
CXXC4-202ENST00000466963 HUNKP57058 714 aa7.56□□□□□ -1.2
CXXC4-202ENST00000466963 GRAPQ13588 217 aa7.56□□□□□ -1.2
CXXC4-202ENST00000466963 DPP8Q6V1X1 898 aaPredicted RBP7.56□□□□□ -1.2
CXXC4-202ENST00000466963 AEBP1Q8IUX7 1158 aa7.56□□□□□ -1.2
CXXC4-202ENST00000466963 SULF1Q8IWU6 871 aa7.56□□□□□ -1.2
CXXC4-202ENST00000466963 GRAPLQ8TC17 118 aaPredicted RBP7.56□□□□□ -1.2
CXXC4-202ENST00000466963 UTP14AQ9BVJ6 771 aaKnown RBP7.56□□□□□ -1.2
CXXC4-202ENST00000466963 WDHD1O75717 1129 aaPredicted RBP7.56□□□□□ -1.2
CXXC4-202ENST00000466963 POTEIP0CG38 1075 aa7.56□□□□□ -1.2
CXXC4-202ENST00000466963 POTEJP0CG39 1038 aa7.56□□□□□ -1.2
CXXC4-202ENST00000466963 DDX46Q7L014 1031 aaKnown RBP7.56□□□□□ -1.2
CXXC4-202ENST00000466963 IL17REQ8NFR9 667 aa7.56□□□□□ -1.2
CXXC4-202ENST00000466963 TBC1D2BQ9UPU7 963 aa7.56□□□□□ -1.2
CXXC4-202ENST00000466963 TRIM28Q13263 835 aaKnown RBP7.55□□□□□ -1.2
CXXC4-202ENST00000466963 ARMC5Q96C12 935 aa7.55□□□□□ -1.2
CXXC4-202ENST00000466963 HPS5Q9UPZ3 1129 aa7.55□□□□□ -1.2
CXXC4-202ENST00000466963 GJA3Q9Y6H8 435 aa7.55□□□□□ -1.2
CXXC4-202ENST00000466963 ZBTB48P10074 688 aaPredicted RBP7.55□□□□□ -1.2
CXXC4-202ENST00000466963 GMPSP49915 693 aaPredicted RBP7.55□□□□□ -1.2
CXXC4-202ENST00000466963 CXCL9Q07325 125 aa7.55□□□□□ -1.2
CXXC4-202ENST00000466963 SF3B3Q15393 1217 aaKnown RBP7.55□□□□□ -1.2
CXXC4-202ENST00000466963 ANKRD13DQ6ZTN6 518 aa7.55□□□□□ -1.2
CXXC4-202ENST00000466963 HDAC9Q9UKV0 1011 aa7.55□□□□□ -1.2
CXXC4-202ENST00000466963 NTSR2O95665 410 aa7.54□□□□□ -1.2
CXXC4-202ENST00000466963 FKBP1AP62942 108 aaKnown RBP7.54□□□□□ -1.2
CXXC4-202ENST00000466963 APOBEC3FQ8IUX4 373 aaKnown RBP7.54□□□□□ -1.2
CXXC4-202ENST00000466963 NKX2-3Q8TAU0 364 aa7.54□□□□□ -1.2
CXXC4-202ENST00000466963 CNOT7Q9UIV1 285 aaKnown RBP7.54□□□□□ -1.2
CXXC4-202ENST00000466963 VIL1P09327 827 aaKnown RBP7.54□□□□□ -1.2
CXXC4-202ENST00000466963 EPS15P42566 896 aa7.54□□□□□ -1.2
CXXC4-202ENST00000466963 KIF23Q02241 960 aaPredicted RBP7.54□□□□□ -1.2
CXXC4-202ENST00000466963 SLC39A6Q13433 755 aa7.54□□□□□ -1.2
CXXC4-202ENST00000466963 MAP3K11Q16584 847 aa7.54□□□□□ -1.2
CXXC4-202ENST00000466963 HABP4Q5JVS0 413 aaKnown RBP7.54□□□□□ -1.2
CXXC4-202ENST00000466963 ARMC9Q7Z3E5 817 aa7.54□□□□□ -1.2
CXXC4-202ENST00000466963 TCIRG1Q13488 830 aa7.54□□□□□ -1.2
CXXC4-202ENST00000466963 ZNF157P51786 506 aaPredicted RBP7.53□□□□□ -1.2
CXXC4-202ENST00000466963 RASAL3Q86YV0 1011 aa7.53□□□□□ -1.2
CXXC4-202ENST00000466963 RTL9Q8NET4 1388 aa7.53□□□□□ -1.2
CXXC4-202ENST00000466963 FMR1Q06787 632 aaKnown RBP eCLIP7.53□□□□□ -1.2
CXXC4-202ENST00000466963 KRT26Q7Z3Y9 468 aa7.53□□□□□ -1.2
CXXC4-202ENST00000466963 HOOK2Q96ED9 719 aa7.53□□□□□ -1.2
CXXC4-202ENST00000466963 RSPH6AQ9H0K4 717 aa7.53□□□□□ -1.2
CXXC4-202ENST00000466963 SRCAPQ6ZRS2 3230 aa7.53□□□□□ -1.2
CXXC4-202ENST00000466963 A1BGP04217 495 aa7.52□□□□□ -1.21
CXXC4-202ENST00000466963 NBPF11Q86T75 865 aa7.52□□□□□ -1.21
CXXC4-202ENST00000466963 HELBQ8NG08 1087 aaPredicted RBP7.52□□□□□ -1.21
CXXC4-202ENST00000466963 ABCC12Q96J65 1359 aa7.52□□□□□ -1.21
CXXC4-202ENST00000466963 MNX1P50219 401 aaPredicted RBP7.52□□□□□ -1.21
CXXC4-202ENST00000466963 PODNQ7Z5L7 613 aa7.52□□□□□ -1.21
CXXC4-202ENST00000466963 SH3TC1Q8TE82 1336 aa7.52□□□□□ -1.21
CXXC4-202ENST00000466963 AOC2O75106 756 aa7.52□□□□□ -1.21
CXXC4-202ENST00000466963 GPR25O00155 361 aa7.51□□□□□ -1.21
CXXC4-202ENST00000466963 MTMR14Q8NCE2 650 aa7.51□□□□□ -1.21
CXXC4-202ENST00000466963 ECM29Q5VYK3 1845 aa7.51□□□□□ -1.21
CXXC4-202ENST00000466963 TESPA1A2RU30 521 aaPredicted RBP7.51□□□□□ -1.21
CXXC4-202ENST00000466963 ATP2B4P23634 1241 aa7.51□□□□□ -1.21
CXXC4-202ENST00000466963 KIF4BQ2VIQ3 1234 aa7.51□□□□□ -1.21
CXXC4-202ENST00000466963 CSRNP1Q96S65 589 aa7.51□□□□□ -1.21
CXXC4-202ENST00000466963 ABCC4O15439 1325 aa7.51□□□□□ -1.21
CXXC4-202ENST00000466963 COL4A5P29400 1685 aa7.51□□□□□ -1.21
CXXC4-202ENST00000466963 MICALL2Q8IY33 904 aa7.5□□□□□ -1.21
CXXC4-202ENST00000466963 GLIS2Q9BZE0 524 aaPredicted RBP7.5□□□□□ -1.21
CXXC4-202ENST00000466963 PER1O15534 1290 aaPredicted RBP7.5□□□□□ -1.21
CXXC4-202ENST00000466963 TMEM106CQ9BVX2 250 aa7.5□□□□□ -1.21
CXXC4-202ENST00000466963 NBPF26B4DH59 902 aa7.49□□□□□ -1.21
CXXC4-202ENST00000466963 WASHC4Q2M389 1173 aa7.49□□□□□ -1.21
CXXC4-202ENST00000466963 NBPF10Q6P3W6 841 aaKnown RBP7.49□□□□□ -1.21
CXXC4-202ENST00000466963 USP16Q9Y5T5 823 aa7.49□□□□□ -1.21
CXXC4-202ENST00000466963 RSBN1LQ6PCB5 846 aaPredicted RBP7.49□□□□□ -1.21
CXXC4-202ENST00000466963 USP48Q86UV5 1035 aa7.49□□□□□ -1.21
CXXC4-202ENST00000466963 CDCA5Q96FF9 252 aa7.49□□□□□ -1.21
CXXC4-202ENST00000466963 HTATIP2Q9BUP3 242 aa7.49□□□□□ -1.21
CXXC4-202ENST00000466963 ZNF219Q9P2Y4 722 aaPredicted RBP7.49□□□□□ -1.21
CXXC4-202ENST00000466963 MED23Q9ULK4 1368 aa7.49□□□□□ -1.21
CXXC4-202ENST00000466963 AOC3Q16853 763 aa7.49□□□□□ -1.21
CXXC4-202ENST00000466963 ZBTB22O15209 634 aa7.48□□□□□ -1.21
CXXC4-202ENST00000466963 EIF4A1P60842 406 aaKnown RBP7.48□□□□□ -1.21
CXXC4-202ENST00000466963 SUPT20HL1Q3ZLR7 823 aa7.48□□□□□ -1.21
CXXC4-202ENST00000466963 LDLRAD1Q5T700 205 aa7.48□□□□□ -1.21
CXXC4-202ENST00000466963 C15orf52Q6ZUT6 534 aaKnown RBP7.48□□□□□ -1.21
CXXC4-202ENST00000466963 CFAP44Q96MT7 982 aa7.48□□□□□ -1.21
CXXC4-202ENST00000466963 FAM205AQ6ZU69 1335 aa7.48□□□□□ -1.21
CXXC4-202ENST00000466963 CALD1Q05682 793 aaKnown RBP7.48□□□□□ -1.21
CXXC4-202ENST00000466963 ZC3H12CQ9C0D7 883 aaKnown RBP7.48□□□□□ -1.21
CXXC4-202ENST00000466963 CASP8AP2Q9UKL3 1982 aa7.48□□□□□ -1.21
CXXC4-202ENST00000466963 TRAF5O00463 557 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 HSPA5P11021 654 aaKnown RBP7.47□□□□□ -1.21
CXXC4-202ENST00000466963 SUSD4Q5VX71 490 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 PRAMEF22A3QJZ6 481 aa7.47□□□□□ -1.21
CXXC4-202ENST00000466963 HOXD10P28358 340 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms