RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 SLAIN2Q9P270 581 aa6.63□□□□□ -1.35
GTF3C3-209ENST00000466862 A0A0A0MRY4 1105 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 KRTAP9-6A0A140TA67 174 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 PRMT3O60678 531 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 GPLD1P80108 840 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 PLAURQ03405 335 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 TMEM164Q5U3C3 297 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 DHX32Q7L7V1 743 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 ETFBKMTQ8IXQ9 262 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 PRIMPOLQ96LW4 560 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 PNMA5Q96PV4 448 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 SAP130Q9H0E3 1048 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 JPH1Q9HDC5 661 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 USP20Q9Y2K6 914 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 KCNMB2Q9Y691 235 aa6.62□□□□□ -1.35
GTF3C3-209ENST00000466862 HOXD8P13378 290 aaPredicted RBP6.61□□□□□ -1.35
GTF3C3-209ENST00000466862 GATA4P43694 442 aa6.61□□□□□ -1.35
GTF3C3-209ENST00000466862 TRIP4Q15650 581 aaPredicted RBP6.61□□□□□ -1.35
GTF3C3-209ENST00000466862 RSPO4Q2I0M5 234 aaPredicted RBP6.61□□□□□ -1.35
GTF3C3-209ENST00000466862 NKAPLQ5M9Q1 402 aa6.61□□□□□ -1.35
GTF3C3-209ENST00000466862 CAPN12Q6ZSI9 719 aa6.61□□□□□ -1.35
GTF3C3-209ENST00000466862 TREML1Q86YW5 311 aa6.61□□□□□ -1.35
GTF3C3-209ENST00000466862 NUDT8Q8WV74 236 aa6.61□□□□□ -1.35
GTF3C3-209ENST00000466862 FRRS1LQ9P0K9 344 aa6.61□□□□□ -1.35
GTF3C3-209ENST00000466862 SELPP16109 830 aa6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 TARSP26639 723 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 DOC2BQ14184 412 aa6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 ADGRE1Q14246 886 aa6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 GRIK4Q16099 956 aa6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 PERM1Q5SV97 790 aa6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 KRT25Q7Z3Z0 450 aa6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 CLP1Q92989 425 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 VTI1AQ96AJ9 217 aa6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 TPSG1Q9NRR2 321 aa6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 RTCBQ9Y3I0 505 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-209ENST00000466862 SASH3O75995 380 aa6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 RARAP10276 462 aa6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 ELNP15502 786 aa6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 MBTPS1Q14703 1052 aa6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 FAM35AQ86V20 835 aa6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 FMR1NBQ8N0W7 255 aaPredicted RBP6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 NACC1Q96RE7 527 aa6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 ZMYND15Q9H091 742 aa6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 SEMA6BQ9H3T3 888 aa6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 IGFLR1Q9H665 355 aa6.59□□□□□ -1.35
GTF3C3-209ENST00000466862 APBA3O96018 575 aa6.58□□□□□ -1.36
GTF3C3-209ENST00000466862 CPB1P15086 417 aa6.58□□□□□ -1.36
GTF3C3-209ENST00000466862 NRLP54845 237 aa6.58□□□□□ -1.36
GTF3C3-209ENST00000466862 TRIM28Q13263 835 aaKnown RBP6.58□□□□□ -1.36
GTF3C3-209ENST00000466862 C16orf46Q6P387 395 aa6.58□□□□□ -1.36
GTF3C3-209ENST00000466862 RGL4Q8IZJ4 473 aa6.58□□□□□ -1.36
GTF3C3-209ENST00000466862 TTC9Q92623 222 aa6.58□□□□□ -1.36
GTF3C3-209ENST00000466862 PBXIP1Q96AQ6 731 aa6.58□□□□□ -1.36
GTF3C3-209ENST00000466862 MLLT1Q03111 559 aaPredicted RBP6.57□□□□□ -1.36
GTF3C3-209ENST00000466862 PCSK7Q16549 785 aa6.57□□□□□ -1.36
GTF3C3-209ENST00000466862 MSL1Q68DK7 614 aa6.57□□□□□ -1.36
GTF3C3-209ENST00000466862 SHISA2Q6UWI4 295 aa6.57□□□□□ -1.36
GTF3C3-209ENST00000466862 MKNK1Q9BUB5 465 aa6.57□□□□□ -1.36
GTF3C3-209ENST00000466862 TLR7Q9NYK1 1049 aaKnown RBP6.57□□□□□ -1.36
GTF3C3-209ENST00000466862 MMP20O60882 483 aa6.56□□□□□ -1.36
GTF3C3-209ENST00000466862 XYLBO75191 536 aa6.56□□□□□ -1.36
GTF3C3-209ENST00000466862 RGS9O75916 674 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-209ENST00000466862 SOX18P35713 384 aa6.56□□□□□ -1.36
GTF3C3-209ENST00000466862 TRAPPC3LQ5T215 181 aa6.56□□□□□ -1.36
GTF3C3-209ENST00000466862 SSBP4Q9BWG4 385 aaPredicted RBP6.56□□□□□ -1.36
GTF3C3-209ENST00000466862 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.56□□□□□ -1.36
GTF3C3-209ENST00000466862 DYRK3O43781 588 aa6.55□□□□□ -1.36
GTF3C3-209ENST00000466862 RAC1P63000 192 aa6.55□□□□□ -1.36
GTF3C3-209ENST00000466862 FOXD4L6Q3SYB3 417 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-209ENST00000466862 FOXD4L3Q6VB84 417 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-209ENST00000466862 DTWD1Q8N5C7 304 aa6.55□□□□□ -1.36
GTF3C3-209ENST00000466862 LENG1Q96BZ8 264 aaPredicted RBP6.55□□□□□ -1.36
GTF3C3-209ENST00000466862 C9orf172C9J069 976 aa6.54□□□□□ -1.36
GTF3C3-209ENST00000466862 PTCD1O75127 700 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-209ENST00000466862 DEAF1O75398 565 aaPredicted RBP6.54□□□□□ -1.36
GTF3C3-209ENST00000466862 BRD2P25440 801 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-209ENST00000466862 DMRTC2Q8IXT2 367 aaPredicted RBP6.54□□□□□ -1.36
GTF3C3-209ENST00000466862 CMTR1Q8N1G2 835 aaKnown RBP6.54□□□□□ -1.36
GTF3C3-209ENST00000466862 ZMYM1Q5SVZ6 1142 aa6.53□□□□□ -1.36
GTF3C3-209ENST00000466862 ELMSAN1Q6PJG2 1045 aa6.53□□□□□ -1.36
GTF3C3-209ENST00000466862 TXNRD3Q86VQ6 643 aa6.53□□□□□ -1.36
GTF3C3-209ENST00000466862 FBXO11Q86XK2 927 aa6.53□□□□□ -1.36
GTF3C3-209ENST00000466862 SMG9Q9H0W8 520 aaKnown RBP6.53□□□□□ -1.36
GTF3C3-209ENST00000466862 ARID3CA6NKF2 412 aa6.52□□□□□ -1.37
GTF3C3-209ENST00000466862 ZBTB39O15060 712 aa6.52□□□□□ -1.37
GTF3C3-209ENST00000466862 EIF2AK2P19525 551 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-209ENST00000466862 HFE2Q6ZVN8 426 aa6.52□□□□□ -1.37
GTF3C3-209ENST00000466862 NLRP13Q86W25 1043 aa6.52□□□□□ -1.37
GTF3C3-209ENST00000466862 CCDC97Q96F63 343 aaPredicted RBP6.52□□□□□ -1.37
GTF3C3-209ENST00000466862 NSUN5Q96P11 429 aaKnown RBP6.52□□□□□ -1.37
GTF3C3-209ENST00000466862 SERPINA10Q9UK55 444 aa6.52□□□□□ -1.37
GTF3C3-209ENST00000466862 ATP2B4P23634 1241 aa6.51□□□□□ -1.37
GTF3C3-209ENST00000466862 ZAP70P43403 619 aa6.51□□□□□ -1.37
GTF3C3-209ENST00000466862 NRG1Q02297 640 aaPredicted RBP6.51□□□□□ -1.37
GTF3C3-209ENST00000466862 NAA30Q147X3 362 aaPredicted RBP6.51□□□□□ -1.37
GTF3C3-209ENST00000466862 COL13A1Q5TAT6 717 aaPredicted RBP6.51□□□□□ -1.37
GTF3C3-209ENST00000466862 WFDC8Q8IUA0 241 aa6.51□□□□□ -1.37
GTF3C3-209ENST00000466862 OR13H1Q8NG92 308 aa6.51□□□□□ -1.37
GTF3C3-209ENST00000466862 PLD4Q96BZ4 506 aa6.51□□□□□ -1.37
GTF3C3-209ENST00000466862 C1orf115Q9H7X2 142 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms