RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 ZNF526Q8TF50 670 aaPredicted RBP12.41□□□□□ -0.42
ATG3-203ENST00000465980 ZNF496Q96IT1 587 aaPredicted RBP12.41□□□□□ -0.42
ATG3-203ENST00000465980 BCS1LQ9Y276 419 aa12.41□□□□□ -0.42
ATG3-203ENST00000465980 ZNF330Q9Y3S2 320 aaPredicted RBP12.41□□□□□ -0.42
ATG3-203ENST00000465980 CACNA1SQ13698 1873 aa12.4□□□□□ -0.42
ATG3-203ENST00000465980 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
ATG3-203ENST00000465980 TGFB2P61812 414 aa12.4□□□□□ -0.42
ATG3-203ENST00000465980 TJAP1Q5JTD0 557 aa12.4□□□□□ -0.42
ATG3-203ENST00000465980 ZNF790Q6PG37 636 aa12.4□□□□□ -0.42
ATG3-203ENST00000465980 VSIG10Q8N0Z9 540 aa12.4□□□□□ -0.42
ATG3-203ENST00000465980 YTHDC1Q96MU7 727 aaKnown RBP12.4□□□□□ -0.42
ATG3-203ENST00000465980 CEMIPQ8WUJ3 1361 aa12.4□□□□□ -0.42
ATG3-203ENST00000465980 HEG1Q9ULI3 1381 aa12.4□□□□□ -0.42
ATG3-203ENST00000465980 CCDC88AQ3V6T2 1871 aa12.4□□□□□ -0.42
ATG3-203ENST00000465980 NRXN2Q9P2S2 1712 aa12.4□□□□□ -0.43
ATG3-203ENST00000465980 BCORQ6W2J9 1755 aa12.39□□□□□ -0.43
ATG3-203ENST00000465980 DLEC1Q9Y238 1755 aa12.39□□□□□ -0.43
ATG3-203ENST00000465980 KCNQ3O43525 872 aa12.39□□□□□ -0.43
ATG3-203ENST00000465980 FCHSD2O94868 740 aa12.39□□□□□ -0.43
ATG3-203ENST00000465980 STARD3NLO95772 234 aa12.39□□□□□ -0.43
ATG3-203ENST00000465980 MCM10Q7L590 875 aa12.39□□□□□ -0.43
ATG3-203ENST00000465980 CDHR5Q9HBB8 845 aa12.39□□□□□ -0.43
ATG3-203ENST00000465980 SBF1O95248 1867 aa12.39□□□□□ -0.43
ATG3-203ENST00000465980 ANKRD31Q8N7Z5 1873 aa12.38□□□□□ -0.43
ATG3-203ENST00000465980 BTBD11A6QL63 1104 aa12.38□□□□□ -0.43
ATG3-203ENST00000465980 C3orf80F5H4A9 247 aa12.38□□□□□ -0.43
ATG3-203ENST00000465980 POLRMTO00411 1230 aaKnown RBP12.38□□□□□ -0.43
ATG3-203ENST00000465980 DCTN1Q14203 1278 aa12.38□□□□□ -0.43
ATG3-203ENST00000465980 RTF1Q92541 710 aaKnown RBP12.38□□□□□ -0.43
ATG3-203ENST00000465980 NECTIN2Q92692 538 aa12.38□□□□□ -0.43
ATG3-203ENST00000465980 NARFQ9UHQ1 456 aa12.38□□□□□ -0.43
ATG3-203ENST00000465980 ADCY9O60503 1353 aa12.38□□□□□ -0.43
ATG3-203ENST00000465980 TM4SF1P30408 202 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 CHRNA5P30532 468 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 C1QTNF8P60827 252 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 NFIXQ14938 502 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 LAPTM4AQ15012 233 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 BICDL1Q6ZP65 573 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 ARHGAP27Q6ZUM4 889 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 NUDT18Q6ZVK8 323 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 TTC13Q8NBP0 860 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 FMNL2Q96PY5 1086 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 IL21Q9HBE4 155 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 LAMB4A4D0S4 1761 aa12.37□□□□□ -0.43
ATG3-203ENST00000465980 KDM3BQ7LBC6 1761 aa12.36□□□□□ -0.43
ATG3-203ENST00000465980 SENP3-EIF4A1A0A087X0R7 540 aa12.36□□□□□ -0.43
ATG3-203ENST00000465980 A1BGP04217 495 aa12.36□□□□□ -0.43
ATG3-203ENST00000465980 PIP4K2AP48426 406 aaPredicted RBP12.36□□□□□ -0.43
ATG3-203ENST00000465980 MTRQ99707 1265 aa12.36□□□□□ -0.43
ATG3-203ENST00000465980 GPBP1L1Q9HC44 474 aaPredicted RBP12.36□□□□□ -0.43
ATG3-203ENST00000465980 COL11A2P13942 1736 aaPredicted RBP12.36□□□□□ -0.43
ATG3-203ENST00000465980 KCNA3P22001 575 aa12.35□□□□□ -0.43
ATG3-203ENST00000465980 EIF5P55010 431 aaKnown RBP12.35□□□□□ -0.43
ATG3-203ENST00000465980 WDR43Q15061 677 aaKnown RBP eCLIP12.35□□□□□ -0.43
ATG3-203ENST00000465980 TBC1D2BQ9UPU7 963 aa12.35□□□□□ -0.43
ATG3-203ENST00000465980 CARMIL3Q8ND23 1372 aa12.34□□□□□ -0.43
ATG3-203ENST00000465980 PRAMEF22A3QJZ6 481 aa12.34□□□□□ -0.43
ATG3-203ENST00000465980 NEFMP07197 916 aa12.34□□□□□ -0.43
ATG3-203ENST00000465980 Q6ZNB5 142 aa12.34□□□□□ -0.43
ATG3-203ENST00000465980 TEX13AQ9BXU3 409 aaPredicted RBP12.34□□□□□ -0.43
ATG3-203ENST00000465980 PIM2Q9P1W9 311 aa12.34□□□□□ -0.43
ATG3-203ENST00000465980 A0A087WZG4 1122 aa12.33□□□□□ -0.44
ATG3-203ENST00000465980 SERPINB2P05120 415 aa12.33□□□□□ -0.44
ATG3-203ENST00000465980 DALRD3Q5D0E6 543 aaKnown RBP12.33□□□□□ -0.44
ATG3-203ENST00000465980 TBC1D9BQ66K14 1250 aa12.33□□□□□ -0.44
ATG3-203ENST00000465980 NPM2Q86SE8 214 aaKnown RBP12.33□□□□□ -0.44
ATG3-203ENST00000465980 MIS18AQ9NYP9 233 aa12.33□□□□□ -0.44
ATG3-203ENST00000465980 USP16Q9Y5T5 823 aa12.33□□□□□ -0.44
ATG3-203ENST00000465980 IL6STP40189 918 aaPredicted RBP12.32□□□□□ -0.44
ATG3-203ENST00000465980 HNRNPUQ00839 825 aaKnown RBP eCLIP12.32□□□□□ -0.44
ATG3-203ENST00000465980 CCDC24Q8N4L8 307 aa12.32□□□□□ -0.44
ATG3-203ENST00000465980 RTN4Q9NQC3 1192 aaKnown RBP12.32□□□□□ -0.44
ATG3-203ENST00000465980 ADAMTS8Q9UP79 889 aa12.32□□□□□ -0.44
ATG3-203ENST00000465980 THUMPD2Q9BTF0 503 aaKnown RBP12.31□□□□□ -0.44
ATG3-203ENST00000465980 NPDC1Q9NQX5 325 aaPredicted RBP12.31□□□□□ -0.44
ATG3-203ENST00000465980 NUP98P52948 1817 aa12.31□□□□□ -0.44
ATG3-203ENST00000465980 MAPK8IP3Q9UPT6 1336 aa12.31□□□□□ -0.44
ATG3-203ENST00000465980 TIAM2Q8IVF5 1701 aa12.31□□□□□ -0.44
ATG3-203ENST00000465980 NPHP1O15259 732 aa12.3□□□□□ -0.44
ATG3-203ENST00000465980 HTATSF1O43719 755 aaKnown RBP12.3□□□□□ -0.44
ATG3-203ENST00000465980 CAMTA2O94983 1202 aa12.3□□□□□ -0.44
ATG3-203ENST00000465980 CENPBP07199 599 aaPredicted RBP12.3□□□□□ -0.44
ATG3-203ENST00000465980 SNRPA1P09661 255 aaKnown RBP12.3□□□□□ -0.44
ATG3-203ENST00000465980 TAF7Q15545 349 aaPredicted RBP12.3□□□□□ -0.44
ATG3-203ENST00000465980 NFE2L2Q16236 605 aa12.3□□□□□ -0.44
ATG3-203ENST00000465980 C9orf131Q5VYM1 1079 aa12.3□□□□□ -0.44
ATG3-203ENST00000465980 PADI6Q6TGC4 694 aa12.3□□□□□ -0.44
ATG3-203ENST00000465980 DZIP3Q86Y13 1208 aaKnown RBP12.3□□□□□ -0.44
ATG3-203ENST00000465980 C2CD5Q86YS7 1000 aa12.3□□□□□ -0.44
ATG3-203ENST00000465980 SLX4Q8IY92 1834 aa12.3□□□□□ -0.44
ATG3-203ENST00000465980 ARFGEF2Q9Y6D5 1785 aa12.29□□□□□ -0.44
ATG3-203ENST00000465980 RNF40O75150 1001 aa12.29□□□□□ -0.44
ATG3-203ENST00000465980 RASSF7Q02833 373 aa12.29□□□□□ -0.44
ATG3-203ENST00000465980 SLF2Q8IX21 1173 aa12.29□□□□□ -0.44
ATG3-203ENST00000465980 PLEKHF1Q96S99 279 aa12.29□□□□□ -0.44
ATG3-203ENST00000465980 RNF181Q9P0P0 153 aa12.29□□□□□ -0.44
ATG3-203ENST00000465980 DICER1Q9UPY3 1922 aaKnown RBP12.29□□□□□ -0.44
ATG3-203ENST00000465980 FER1L6Q2WGJ9 1857 aa12.28□□□□□ -0.44
ATG3-203ENST00000465980 APLP1P51693 650 aa12.28□□□□□ -0.44
ATG3-203ENST00000465980 PRR5LQ6MZQ0 368 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms