RNA–Protein interactions for RNA: ENST00000465167.1

SSBP1-204, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 517 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-204ENST00000465167 NUP188Q5SRE5 1749 aa8.14□□□□□ -1.11
SSBP1-204ENST00000465167 LRRC37A3O60309 1634 aa8.14□□□□□ -1.11
SSBP1-204ENST00000465167 RGPD3A6NKT7 1758 aaPredicted RBP8.13□□□□□ -1.11
SSBP1-204ENST00000465167 RGPD4Q7Z3J3 1758 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 RGPD5Q99666 1765 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 TTC21BQ7Z4L5 1316 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 MON2Q7Z3U7 1717 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 USP17L5A8MUK1 530 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 ZBTB24O43167 697 aaPredicted RBP8.13□□□□□ -1.11
SSBP1-204ENST00000465167 ATG7O95352 703 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 GGCXP38435 758 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 PLA2G2CQ5R387 149 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 RNF135Q8IUD6 432 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 PLEKHM2Q8IWE5 1019 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 TMC1Q8TDI8 760 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 CARD11Q9BXL7 1154 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 VRTNQ9H8Y1 702 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 PPP1R1BQ9UD71 204 aaPredicted RBP8.13□□□□□ -1.11
SSBP1-204ENST00000465167 ABCC6O95255 1503 aa8.13□□□□□ -1.11
SSBP1-204ENST00000465167 WDR17Q8IZU2 1322 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 USP17L3A6NCW0 530 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 USP17L4A6NCW7 530 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 PPP1R18Q6NYC8 613 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 USP17L2Q6R6M4 530 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 USP17L1Q7RTZ2 530 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 CAMKK2Q96RR4 588 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 C1QTNF2Q9BXJ5 285 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 SBF2Q86WG5 1849 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 EP400Q96L91 3159 aa8.12□□□□□ -1.11
SSBP1-204ENST00000465167 CCDC7Q96M83 1385 aa8.11□□□□□ -1.11
SSBP1-204ENST00000465167 PDE4CQ08493 712 aa8.11□□□□□ -1.11
SSBP1-204ENST00000465167 TRIM32Q13049 653 aa8.11□□□□□ -1.11
SSBP1-204ENST00000465167 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.11□□□□□ -1.11
SSBP1-204ENST00000465167 DEPDC4Q8N2C3 294 aa8.11□□□□□ -1.11
SSBP1-204ENST00000465167 PLPP7Q8NBV4 271 aa8.11□□□□□ -1.11
SSBP1-204ENST00000465167 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.11□□□□□ -1.11
SSBP1-204ENST00000465167 TERF2IPQ9NYB0 399 aa8.11□□□□□ -1.11
SSBP1-204ENST00000465167 LTN1O94822 1766 aa8.11□□□□□ -1.11
SSBP1-204ENST00000465167 COL18A1P39060 1754 aa8.11□□□□□ -1.11
SSBP1-204ENST00000465167 SBNO2Q9Y2G9 1366 aa8.1□□□□□ -1.11
SSBP1-204ENST00000465167 EXOC5O00471 708 aa8.1□□□□□ -1.11
SSBP1-204ENST00000465167 LZTS3O60299 673 aaPredicted RBP8.1□□□□□ -1.11
SSBP1-204ENST00000465167 MAP7D1Q3KQU3 841 aa8.1□□□□□ -1.11
SSBP1-204ENST00000465167 CARD10Q9BWT7 1032 aa8.1□□□□□ -1.11
SSBP1-204ENST00000465167 SPON1Q9HCB6 807 aa8.1□□□□□ -1.11
SSBP1-204ENST00000465167 PEAK1Q9H792 1746 aa8.09□□□□□ -1.11
SSBP1-204ENST00000465167 GIGYF1O75420 1035 aaPredicted RBP8.09□□□□□ -1.11
SSBP1-204ENST00000465167 RPIAP49247 311 aa8.09□□□□□ -1.11
SSBP1-204ENST00000465167 SKOR1P84550 965 aa8.09□□□□□ -1.11
SSBP1-204ENST00000465167 NCOA4Q13772 614 aa8.09□□□□□ -1.11
SSBP1-204ENST00000465167 TSGA10IPQ3SY00 556 aa8.09□□□□□ -1.11
SSBP1-204ENST00000465167 TRAF7Q6Q0C0 670 aa8.09□□□□□ -1.11
SSBP1-204ENST00000465167 ARHGEF25Q86VW2 580 aa8.09□□□□□ -1.11
SSBP1-204ENST00000465167 TRMT44Q8IYL2 757 aaKnown RBP8.09□□□□□ -1.11
SSBP1-204ENST00000465167 SLC10A4Q96EP9 437 aa8.09□□□□□ -1.11
SSBP1-204ENST00000465167 USTQ9Y2C2 406 aa8.09□□□□□ -1.11
SSBP1-204ENST00000465167 EDC4Q6P2E9 1401 aaKnown RBP8.09□□□□□ -1.11
SSBP1-204ENST00000465167 NINLQ9Y2I6 1382 aa8.09□□□□□ -1.12
SSBP1-204ENST00000465167 NFAT5O94916 1531 aa8.08□□□□□ -1.12
SSBP1-204ENST00000465167 USP54Q70EL1 1684 aa8.08□□□□□ -1.12
SSBP1-204ENST00000465167 FAM208AQ9UK61 1670 aaKnown RBP8.08□□□□□ -1.12
SSBP1-204ENST00000465167 PLSCR1O15162 318 aa8.08□□□□□ -1.12
SSBP1-204ENST00000465167 WNT7BP56706 349 aa8.08□□□□□ -1.12
SSBP1-204ENST00000465167 NLRP2Q9NX02 1062 aa8.08□□□□□ -1.12
SSBP1-204ENST00000465167 MKRN1Q9UHC7 482 aaKnown RBP8.08□□□□□ -1.12
SSBP1-204ENST00000465167 TNS2Q63HR2 1409 aa8.08□□□□□ -1.12
SSBP1-204ENST00000465167 KAT6BQ8WYB5 2073 aa8.07□□□□□ -1.12
SSBP1-204ENST00000465167 KCNQ2O43526 872 aa8.07□□□□□ -1.12
SSBP1-204ENST00000465167 VARSP26640 1264 aaKnown RBP8.07□□□□□ -1.12
SSBP1-204ENST00000465167 ELOAQ14241 798 aaKnown RBP8.07□□□□□ -1.12
SSBP1-204ENST00000465167 RNF20Q5VTR2 975 aa8.07□□□□□ -1.12
SSBP1-204ENST00000465167 KCTD17Q8N5Z5 321 aa8.07□□□□□ -1.12
SSBP1-204ENST00000465167 CCDC85AQ96PX6 553 aaPredicted RBP8.07□□□□□ -1.12
SSBP1-204ENST00000465167 STK32BQ9NY57 414 aa8.07□□□□□ -1.12
SSBP1-204ENST00000465167 CDV3Q9UKY7 258 aaKnown RBP8.07□□□□□ -1.12
SSBP1-204ENST00000465167 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
SSBP1-204ENST00000465167 BCL9O00512 1426 aa8.06□□□□□ -1.12
SSBP1-204ENST00000465167 NHSQ6T4R5 1651 aa8.06□□□□□ -1.12
SSBP1-204ENST00000465167 ESPNB1AK53 854 aa8.06□□□□□ -1.12
SSBP1-204ENST00000465167 IL2RBP14784 551 aa8.06□□□□□ -1.12
SSBP1-204ENST00000465167 MMRN1Q13201 1228 aa8.06□□□□□ -1.12
SSBP1-204ENST00000465167 EML3Q32P44 896 aa8.06□□□□□ -1.12
SSBP1-204ENST00000465167 NBPF20Q3BBV1 942 aa8.06□□□□□ -1.12
SSBP1-204ENST00000465167 NME9Q86XW9 330 aa8.06□□□□□ -1.12
SSBP1-204ENST00000465167 CARNS1A5YM72 827 aa8.05□□□□□ -1.12
SSBP1-204ENST00000465167 TMEM88BA6NKF7 163 aa8.05□□□□□ -1.12
SSBP1-204ENST00000465167 FAM196BA6NMK8 535 aa8.05□□□□□ -1.12
SSBP1-204ENST00000465167 ATP5J2-PTCD1G3V325 749 aa8.05□□□□□ -1.12
SSBP1-204ENST00000465167 CD2BP2O95400 341 aaKnown RBP8.05□□□□□ -1.12
SSBP1-204ENST00000465167 MARCH10Q8NA82 808 aaPredicted RBP8.05□□□□□ -1.12
SSBP1-204ENST00000465167 ANKRD24Q8TF21 1146 aa8.05□□□□□ -1.12
SSBP1-204ENST00000465167 COG3Q96JB2 828 aa8.05□□□□□ -1.12
SSBP1-204ENST00000465167 PUS7Q96PZ0 661 aaKnown RBP8.05□□□□□ -1.12
SSBP1-204ENST00000465167 DOLKQ9UPQ8 538 aa8.05□□□□□ -1.12
SSBP1-204ENST00000465167 A0A1W2PP64 1363 aa8.05□□□□□ -1.12
SSBP1-204ENST00000465167 SMG6Q86US8 1419 aaKnown RBP8.04□□□□□ -1.12
SSBP1-204ENST00000465167 RASA1P20936 1047 aa8.04□□□□□ -1.12
SSBP1-204ENST00000465167 AMPHP49418 695 aa8.04□□□□□ -1.12
SSBP1-204ENST00000465167 PTK7Q13308 1070 aa8.04□□□□□ -1.12
SSBP1-204ENST00000465167 CRTC2Q53ET0 693 aaPredicted RBP8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms