RNA–Protein interactions for RNA: ENST00000464729.1

NUP188-202, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 408 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-202ENST00000464729 DIP2CQ9Y2E4 1556 aa9.41□□□□□ -0.9
NUP188-202ENST00000464729 PLA2R1Q13018 1463 aa9.4□□□□□ -0.9
NUP188-202ENST00000464729 CLIP1P30622 1438 aa9.4□□□□□ -0.9
NUP188-202ENST00000464729 EEA1Q15075 1411 aa9.4□□□□□ -0.9
NUP188-202ENST00000464729 DCDC2BA2VCK2 349 aa9.4□□□□□ -0.9
NUP188-202ENST00000464729 FAM157BP0CG42 384 aa9.4□□□□□ -0.9
NUP188-202ENST00000464729 TNP2Q05952 138 aa9.4□□□□□ -0.9
NUP188-202ENST00000464729 KCNMA1Q12791 1236 aa9.4□□□□□ -0.9
NUP188-202ENST00000464729 ENAMQ9NRM1 1142 aa9.4□□□□□ -0.9
NUP188-202ENST00000464729 SPAG9O60271 1321 aaKnown RBP9.39□□□□□ -0.91
NUP188-202ENST00000464729 OIP5O43482 229 aa9.39□□□□□ -0.91
NUP188-202ENST00000464729 PPP1R12BO60237 982 aaPredicted RBP9.39□□□□□ -0.91
NUP188-202ENST00000464729 MAPTP10636 758 aaKnown RBP9.39□□□□□ -0.91
NUP188-202ENST00000464729 BMP4P12644 408 aa9.39□□□□□ -0.91
NUP188-202ENST00000464729 GSK3AP49840 483 aa9.39□□□□□ -0.91
NUP188-202ENST00000464729 HNRNPMP52272 730 aaKnown RBP eCLIP9.39□□□□□ -0.91
NUP188-202ENST00000464729 C1orf53Q5VUE5 145 aa9.39□□□□□ -0.91
NUP188-202ENST00000464729 STAG2Q8N3U4 1231 aa9.39□□□□□ -0.91
NUP188-202ENST00000464729 ARXQ96QS3 562 aa9.39□□□□□ -0.91
NUP188-202ENST00000464729 CHMP3Q9Y3E7 222 aa9.39□□□□□ -0.91
NUP188-202ENST00000464729 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
NUP188-202ENST00000464729 GJA3Q9Y6H8 435 aa9.39□□□□□ -0.91
NUP188-202ENST00000464729 TCOF1Q13428 1488 aaKnown RBP9.39□□□□□ -0.91
NUP188-202ENST00000464729 ATAD2Q6PL18 1390 aa9.38□□□□□ -0.91
NUP188-202ENST00000464729 RNF225M0QZC1 329 aaPredicted RBP9.38□□□□□ -0.91
NUP188-202ENST00000464729 EFSO43281 561 aa9.38□□□□□ -0.91
NUP188-202ENST00000464729 FAM182BQ5T319 152 aa9.38□□□□□ -0.91
NUP188-202ENST00000464729 ANKLE2Q86XL3 938 aa9.38□□□□□ -0.91
NUP188-202ENST00000464729 GAS2L2Q8NHY3 880 aa9.38□□□□□ -0.91
NUP188-202ENST00000464729 GDF2Q9UK05 429 aaPredicted RBP9.38□□□□□ -0.91
NUP188-202ENST00000464729 MYO5CQ9NQX4 1742 aa9.38□□□□□ -0.91
NUP188-202ENST00000464729 KHNYNO15037 678 aaKnown RBP9.37□□□□□ -0.91
NUP188-202ENST00000464729 RHPN1Q8TCX5 695 aa9.37□□□□□ -0.91
NUP188-202ENST00000464729 C2orf49Q9BVC5 232 aaPredicted RBP9.37□□□□□ -0.91
NUP188-202ENST00000464729 PHACTR1Q9C0D0 580 aa9.37□□□□□ -0.91
NUP188-202ENST00000464729 PTPRKQ15262 1439 aa9.37□□□□□ -0.91
NUP188-202ENST00000464729 MED1Q15648 1581 aaPredicted RBP9.37□□□□□ -0.91
NUP188-202ENST00000464729 CD33P20138 364 aa9.36□□□□□ -0.91
NUP188-202ENST00000464729 MARSP56192 900 aaKnown RBP9.36□□□□□ -0.91
NUP188-202ENST00000464729 LRRC69Q6ZNQ3 347 aa9.36□□□□□ -0.91
NUP188-202ENST00000464729 THEMISQ8N1K5 641 aaPredicted RBP9.36□□□□□ -0.91
NUP188-202ENST00000464729 GOLGA6L1Q8N7Z2 621 aa9.36□□□□□ -0.91
NUP188-202ENST00000464729 SCG3Q8WXD2 468 aaKnown RBP9.36□□□□□ -0.91
NUP188-202ENST00000464729 HCN4Q9Y3Q4 1203 aa9.36□□□□□ -0.91
NUP188-202ENST00000464729 ABCA6Q8N139 1617 aa9.35□□□□□ -0.91
NUP188-202ENST00000464729 ARAFP10398 606 aa9.35□□□□□ -0.91
NUP188-202ENST00000464729 SLCO4C1Q6ZQN7 724 aa9.35□□□□□ -0.91
NUP188-202ENST00000464729 C1orf229Q6ZS94 237 aaPredicted RBP9.35□□□□□ -0.91
NUP188-202ENST00000464729 HINFPQ9BQA5 517 aa9.35□□□□□ -0.91
NUP188-202ENST00000464729 RGS17Q9UGC6 210 aaPredicted RBP9.35□□□□□ -0.91
NUP188-202ENST00000464729 KIF14Q15058 1648 aa9.34□□□□□ -0.91
NUP188-202ENST00000464729 SHANK2Q9UPX8 1470 aa9.34□□□□□ -0.91
NUP188-202ENST00000464729 SHISA8B8ZZ34 492 aa9.34□□□□□ -0.91
NUP188-202ENST00000464729 IGFBP4P22692 258 aa9.34□□□□□ -0.91
NUP188-202ENST00000464729 LAMC2Q13753 1193 aa9.34□□□□□ -0.91
NUP188-202ENST00000464729 ALDH16A1Q8IZ83 802 aa9.34□□□□□ -0.91
NUP188-202ENST00000464729 NEDD1Q8NHV4 660 aa9.34□□□□□ -0.91
NUP188-202ENST00000464729 SCARF2Q96GP6 870 aaPredicted RBP9.34□□□□□ -0.91
NUP188-202ENST00000464729 STRN4Q9NRL3 753 aa9.34□□□□□ -0.91
NUP188-202ENST00000464729 GGA1Q9UJY5 639 aa9.34□□□□□ -0.91
NUP188-202ENST00000464729 CPS1P31327 1500 aa9.33□□□□□ -0.92
NUP188-202ENST00000464729 RFX1P22670 979 aa9.33□□□□□ -0.92
NUP188-202ENST00000464729 CDCA8Q53HL2 280 aa9.33□□□□□ -0.92
NUP188-202ENST00000464729 GALNT6Q8NCL4 622 aa9.33□□□□□ -0.92
NUP188-202ENST00000464729 KIDINS220Q9ULH0 1771 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 LGR5O75473 907 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 RASSF7Q02833 373 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 EDARADDQ8WWZ3 215 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 HSH2DQ96JZ2 352 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 NEUROD4Q9HD90 331 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 AVENQ9NQS1 362 aaPredicted RBP9.32□□□□□ -0.92
NUP188-202ENST00000464729 MARK1Q9P0L2 795 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 ANKIB1Q9P2G1 1089 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 CFDP1Q9UEE9 299 aaPredicted RBP9.32□□□□□ -0.92
NUP188-202ENST00000464729 A2ML1A8K2U0 1454 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 ARHGAP35Q9NRY4 1499 aa9.32□□□□□ -0.92
NUP188-202ENST00000464729 ABCC1P33527 1531 aa9.31□□□□□ -0.92
NUP188-202ENST00000464729 CDC42BPBQ9Y5S2 1711 aa9.31□□□□□ -0.92
NUP188-202ENST00000464729 SRPK2P78362 688 aaKnown RBP9.31□□□□□ -0.92
NUP188-202ENST00000464729 FAM200AQ8TCP9 573 aa9.31□□□□□ -0.92
NUP188-202ENST00000464729 CEP170BQ9Y4F5 1589 aaPredicted RBP9.31□□□□□ -0.92
NUP188-202ENST00000464729 MROH2AA6NES4 1674 aa9.31□□□□□ -0.92
NUP188-202ENST00000464729 A2MP01023 1474 aa9.3□□□□□ -0.92
NUP188-202ENST00000464729 EPXP11678 715 aa9.3□□□□□ -0.92
NUP188-202ENST00000464729 WEE1P30291 646 aa9.3□□□□□ -0.92
NUP188-202ENST00000464729 IRS1P35568 1242 aa9.3□□□□□ -0.92
NUP188-202ENST00000464729 ZNF468Q5VIY5 522 aaPredicted RBP9.3□□□□□ -0.92
NUP188-202ENST00000464729 ZNF280CQ8ND82 737 aa9.3□□□□□ -0.92
NUP188-202ENST00000464729 SUSD3Q96L08 255 aa9.3□□□□□ -0.92
NUP188-202ENST00000464729 KLF15Q9UIH9 416 aa9.3□□□□□ -0.92
NUP188-202ENST00000464729 NOVA2Q9UNW9 492 aaKnown RBP9.3□□□□□ -0.92
NUP188-202ENST00000464729 DNMT3AQ9Y6K1 912 aaPredicted RBP9.3□□□□□ -0.92
NUP188-202ENST00000464729 KIAA1107Q9UPP5 1409 aa9.3□□□□□ -0.92
NUP188-202ENST00000464729 SAMD9LQ8IVG5 1584 aa9.29□□□□□ -0.92
NUP188-202ENST00000464729 TNRQ92752 1358 aa9.29□□□□□ -0.92
NUP188-202ENST00000464729 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.29□□□□□ -0.929e-6■□□□□ 9.6
NUP188-202ENST00000464729 NEURL1BA8MQ27 555 aa9.29□□□□□ -0.92
NUP188-202ENST00000464729 ADH6P28332 368 aa9.29□□□□□ -0.92
NUP188-202ENST00000464729 ELOAQ14241 798 aaKnown RBP9.29□□□□□ -0.92
NUP188-202ENST00000464729 KANK3Q6NY19 840 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms