RNA–Protein interactions for RNA: ENST00000463599.5

U2AF1-205, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 338 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-205ENST00000463599 BRD7Q9NPI1 651 aa9.41□□□□□ -0.9
U2AF1-205ENST00000463599 PPP4R2Q9NY27 417 aa9.41□□□□□ -0.9
U2AF1-205ENST00000463599 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.41□□□□□ -0.9
U2AF1-205ENST00000463599 GRNP28799 593 aaKnown RBP9.4□□□□□ -0.9
U2AF1-205ENST00000463599 IRS1P35568 1242 aa9.4□□□□□ -0.9
U2AF1-205ENST00000463599 TAF1CQ15572 869 aaPredicted RBP9.4□□□□□ -0.9
U2AF1-205ENST00000463599 CTC1Q2NKJ3 1217 aa9.4□□□□□ -0.9
U2AF1-205ENST00000463599 EFHC2Q5JST6 749 aa9.4□□□□□ -0.9
U2AF1-205ENST00000463599 C1orf127Q8N9H9 656 aa9.4□□□□□ -0.9
U2AF1-205ENST00000463599 NPHS2Q9NP85 383 aa9.4□□□□□ -0.9
U2AF1-205ENST00000463599 FAM187AA6NFU0 413 aa9.39□□□□□ -0.91
U2AF1-205ENST00000463599 GADD45BO75293 160 aaPredicted RBP9.39□□□□□ -0.91
U2AF1-205ENST00000463599 KCNQ4P56696 695 aa9.39□□□□□ -0.91
U2AF1-205ENST00000463599 LBRQ14739 615 aaKnown RBP9.39□□□□□ -0.91
U2AF1-205ENST00000463599 HS2ST1Q7LGA3 356 aa9.39□□□□□ -0.91
U2AF1-205ENST00000463599 ZNF654Q8IZM8 581 aa9.39□□□□□ -0.91
U2AF1-205ENST00000463599 GAS2L1Q99501 681 aaPredicted RBP9.39□□□□□ -0.91
U2AF1-205ENST00000463599 CHRDQ9H2X0 955 aa9.39□□□□□ -0.91
U2AF1-205ENST00000463599 CAPN10Q9HC96 672 aa9.39□□□□□ -0.91
U2AF1-205ENST00000463599 CNTN3Q9P232 1028 aa9.39□□□□□ -0.91
U2AF1-205ENST00000463599 EREGO14944 169 aa9.38□□□□□ -0.91
U2AF1-205ENST00000463599 RGS20O76081 388 aa9.38□□□□□ -0.91
U2AF1-205ENST00000463599 POLR3DP05423 398 aaPredicted RBP9.38□□□□□ -0.91
U2AF1-205ENST00000463599 CES1P23141 567 aa9.38□□□□□ -0.91
U2AF1-205ENST00000463599 SMCPP49901 116 aaPredicted RBP9.38□□□□□ -0.91
U2AF1-205ENST00000463599 ST13P50502 369 aaKnown RBP9.38□□□□□ -0.91
U2AF1-205ENST00000463599 PTPN12Q05209 780 aaKnown RBP9.38□□□□□ -0.91
U2AF1-205ENST00000463599 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.38□□□□□ -0.91
U2AF1-205ENST00000463599 FIGNL1Q6PIW4 674 aa9.38□□□□□ -0.91
U2AF1-205ENST00000463599 TINF2Q9BSI4 451 aa9.38□□□□□ -0.91
U2AF1-205ENST00000463599 BCO2Q9BYV7 579 aa9.38□□□□□ -0.91
U2AF1-205ENST00000463599 ZCCHC2Q9C0B9 1178 aaKnown RBP9.38□□□□□ -0.91
U2AF1-205ENST00000463599 DDX41Q9UJV9 622 aaKnown RBP9.38□□□□□ -0.91
U2AF1-205ENST00000463599 KCNH4Q9UQ05 1017 aa9.38□□□□□ -0.91
U2AF1-205ENST00000463599 USP17L7P0C7H9 530 aa9.37□□□□□ -0.91
U2AF1-205ENST00000463599 BMP1P13497 986 aa9.37□□□□□ -0.91
U2AF1-205ENST00000463599 NXPE4Q6UWF7 544 aa9.37□□□□□ -0.91
U2AF1-205ENST00000463599 TRIM46Q7Z4K8 759 aa9.37□□□□□ -0.91
U2AF1-205ENST00000463599 ZFP42Q96MM3 310 aa9.37□□□□□ -0.91
U2AF1-205ENST00000463599 ACBD3Q9H3P7 528 aa9.37□□□□□ -0.91
U2AF1-205ENST00000463599 SUV39H2Q9H5I1 410 aa9.37□□□□□ -0.91
U2AF1-205ENST00000463599 USP48Q86UV5 1035 aa9.36□□□□□ -0.91
U2AF1-205ENST00000463599 TANGO6Q9C0B7 1094 aa9.36□□□□□ -0.91
U2AF1-205ENST00000463599 GGT7Q9UJ14 662 aa9.36□□□□□ -0.91
U2AF1-205ENST00000463599 DGAT1O75907 488 aa9.35□□□□□ -0.91
U2AF1-205ENST00000463599 EDN3P14138 238 aa9.35□□□□□ -0.91
U2AF1-205ENST00000463599 CCINQ13939 588 aa9.35□□□□□ -0.91
U2AF1-205ENST00000463599 KIAA0319Q5VV43 1072 aa9.35□□□□□ -0.91
U2AF1-205ENST00000463599 DNMT3LQ9UJW3 386 aa9.35□□□□□ -0.91
U2AF1-205ENST00000463599 TRAK1Q9UPV9 953 aa9.35□□□□□ -0.91
U2AF1-205ENST00000463599 ATXN7O15265 892 aaPredicted RBP9.34□□□□□ -0.91
U2AF1-205ENST00000463599 SASH3O75995 380 aa9.34□□□□□ -0.91
U2AF1-205ENST00000463599 FAM157BP0CG42 384 aa9.34□□□□□ -0.91
U2AF1-205ENST00000463599 GSTT1P30711 240 aa9.34□□□□□ -0.91
U2AF1-205ENST00000463599 GRM2Q14416 872 aa9.34□□□□□ -0.91
U2AF1-205ENST00000463599 ZNF394Q53GI3 561 aa9.34□□□□□ -0.91
U2AF1-205ENST00000463599 MEI1Q5TIA1 1274 aa9.34□□□□□ -0.91
U2AF1-205ENST00000463599 PRKAG2Q9UGJ0 569 aa9.34□□□□□ -0.91
U2AF1-205ENST00000463599 INPP5FQ9Y2H2 1132 aa9.34□□□□□ -0.91
U2AF1-205ENST00000463599 PCDHGC4Q9Y5F7 938 aa9.34□□□□□ -0.91
U2AF1-205ENST00000463599 PHF20L1A8MW92 1017 aa9.33□□□□□ -0.92
U2AF1-205ENST00000463599 VEGFBP49765 207 aa9.33□□□□□ -0.92
U2AF1-205ENST00000463599 RACK1P63244 317 aaKnown RBP9.33□□□□□ -0.92
U2AF1-205ENST00000463599 LAMC2Q13753 1193 aa9.33□□□□□ -0.92
U2AF1-205ENST00000463599 VPS37DQ86XT2 251 aa9.33□□□□□ -0.92
U2AF1-205ENST00000463599 GSX2Q9BZM3 304 aa9.33□□□□□ -0.92
U2AF1-205ENST00000463599 EHD4Q9H223 541 aa9.33□□□□□ -0.92
U2AF1-205ENST00000463599 EFCC1Q9HA90 598 aa9.33□□□□□ -0.92
U2AF1-205ENST00000463599 SRA1Q9HD15 236 aaKnown RBP9.33□□□□□ -0.92
U2AF1-205ENST00000463599 POTECB2RU33 542 aa9.32□□□□□ -0.92
U2AF1-205ENST00000463599 H7C1W4 665 aa9.32□□□□□ -0.92
U2AF1-205ENST00000463599 AXIN1O15169 862 aa9.32□□□□□ -0.92
U2AF1-205ENST00000463599 MAN1A2O60476 641 aa9.32□□□□□ -0.92
U2AF1-205ENST00000463599 ATP2B1P20020 1258 aa9.32□□□□□ -0.92
U2AF1-205ENST00000463599 TARSP26639 723 aaKnown RBP9.32□□□□□ -0.92
U2AF1-205ENST00000463599 SFSWAPQ12872 951 aaKnown RBP9.32□□□□□ -0.92
U2AF1-205ENST00000463599 PKDCCQ504Y2 493 aa9.32□□□□□ -0.92
U2AF1-205ENST00000463599 OR13H1Q8NG92 308 aa9.32□□□□□ -0.92
U2AF1-205ENST00000463599 GMLQ99445 158 aa9.32□□□□□ -0.92
U2AF1-205ENST00000463599 SENP3-EIF4A1A0A087X0R7 540 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 A0A1W2PP55 124 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 KHNYNO15037 678 aaKnown RBP9.31□□□□□ -0.92
U2AF1-205ENST00000463599 EFSO43281 561 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 TNNI2P48788 182 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 RIPOR1Q6ZS17 1223 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 KRT25Q7Z3Z0 450 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 CRIPAKQ8N1N5 446 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 PNMA5Q96PV4 448 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 NOC4LQ9BVI4 516 aaKnown RBP9.31□□□□□ -0.92
U2AF1-205ENST00000463599 SALL4Q9UJQ4 1053 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 PCDHGB7Q9Y5F8 929 aa9.31□□□□□ -0.92
U2AF1-205ENST00000463599 MMP20O60882 483 aa9.3□□□□□ -0.92
U2AF1-205ENST00000463599 CYP2E1P05181 493 aaPredicted RBP9.3□□□□□ -0.92
U2AF1-205ENST00000463599 RARAP10276 462 aa9.3□□□□□ -0.92
U2AF1-205ENST00000463599 ARID5AQ03989 594 aa9.3□□□□□ -0.92
U2AF1-205ENST00000463599 XRCC5P13010 732 aaKnown RBP9.29□□□□□ -0.92
U2AF1-205ENST00000463599 TNP2Q05952 138 aa9.29□□□□□ -0.92
U2AF1-205ENST00000463599 ERMP1Q7Z2K6 904 aa9.29□□□□□ -0.92
U2AF1-205ENST00000463599 GLIS3Q8NEA6 775 aa9.29□□□□□ -0.92
U2AF1-205ENST00000463599 ARMC5Q96C12 935 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms